Protein–RNA interactions for Protein: O95292

VAPB, Vesicle-associated membrane protein-associated protein B/C, humanhuman

Predictions only

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VAPBO95292 HAS2-201ENST00000303924 4190 ntAPPRIS P1 TSL 1 (best) BASIC2.18□□□□□ -2.06
VAPBO95292 ANP32E-209ENST00000616917 2989 ntTSL 2 BASIC2.18□□□□□ -2.06
VAPBO95292 AC010329.5-201ENST00000623497 2174 ntBASIC2.18□□□□□ -2.06
VAPBO95292 CFAP97-201ENST00000296775 903 ntTSL 5 BASIC2.18□□□□□ -2.06
VAPBO95292 EDDM3A-201ENST00000326842 927 ntAPPRIS P1 TSL 1 (best) BASIC2.18□□□□□ -2.06
VAPBO95292 RNU6-707P-201ENST00000364647 95 ntBASIC2.18□□□□□ -2.06
VAPBO95292 RNU6-140P-201ENST00000384566 108 ntBASIC2.18□□□□□ -2.06
VAPBO95292 TRAJ32-201ENST00000390505 66 ntAPPRIS P1 BASIC2.18□□□□□ -2.06
VAPBO95292 BCL2L15-203ENST00000393320 276 ntTSL 1 (best) BASIC2.18□□□□□ -2.06
VAPBO95292 DHFRP6-201ENST00000401776 268 ntBASIC2.18□□□□□ -2.06
VAPBO95292 BTF3P7-201ENST00000407097 488 ntBASIC2.18□□□□□ -2.06
VAPBO95292 RNU2-49P-201ENST00000410666 184 ntBASIC2.18□□□□□ -2.06
VAPBO95292 TXNDC8-204ENST00000423740 356 ntTSL 1 (best) BASIC2.18□□□□□ -2.06
VAPBO95292 ARF4P4-201ENST00000439608 520 ntBASIC2.18□□□□□ -2.06
VAPBO95292 AC096666.1-201ENST00000454965 348 ntTSL 3 BASIC2.18□□□□□ -2.06
VAPBO95292 AC107626.1-201ENST00000471084 183 ntBASIC2.18□□□□□ -2.06
VAPBO95292 MRPL42P6-201ENST00000486397 371 ntBASIC2.18□□□□□ -2.06
VAPBO95292 AC138956.1-201ENST00000508187 504 ntTSL 3 BASIC2.18□□□□□ -2.06
VAPBO95292 COL6A4P2-205ENST00000509855 506 ntBASIC2.18□□□□□ -2.06
VAPBO95292 SUB1-211ENST00000512913 684 ntAPPRIS P1 TSL 2 BASIC2.18□□□□□ -2.06
VAPBO95292 RNA5SP200-201ENST00000516360 103 ntBASIC2.18□□□□□ -2.06
VAPBO95292 AP003181.1-201ENST00000528811 445 ntTSL 3 BASIC2.18□□□□□ -2.06
VAPBO95292 AC044798.1-201ENST00000565146 418 ntTSL 5 BASIC2.18□□□□□ -2.06
VAPBO95292 MIR5708-201ENST00000579723 85 ntBASIC2.18□□□□□ -2.06
VAPBO95292 MIR4672-201ENST00000583126 81 ntBASIC2.18□□□□□ -2.06
VAPBO95292 MTND4LP5-201ENST00000605152 292 ntBASIC2.18□□□□□ -2.06
VAPBO95292 AC083798.2-205ENST00000608015 575 ntTSL 5 BASIC2.18□□□□□ -2.06
VAPBO95292 AL603758.1-201ENST00000618654 241 ntBASIC2.18□□□□□ -2.06
VAPBO95292 BIRC6-AS2-201ENST00000623382 589 ntTSL 2 BASIC2.18□□□□□ -2.06
VAPBO95292 AC120349.2-201ENST00000625002 298 ntBASIC2.18□□□□□ -2.06
VAPBO95292 AC093591.3-201ENST00000634516 308 ntBASIC2.18□□□□□ -2.06
VAPBO95292 DDX10P1-201ENST00000448545 1933 ntBASIC2.18□□□□□ -2.06
VAPBO95292 MTND4P27-201ENST00000450813 1354 ntBASIC2.18□□□□□ -2.06
VAPBO95292 CDR1-202ENST00000625883 1485 ntBASIC2.18□□□□□ -2.06
VAPBO95292 PSG8-202ENST00000401467 1686 ntTSL 5 BASIC2.18□□□□□ -2.06
VAPBO95292 MTND5P6-201ENST00000422338 1798 ntBASIC2.18□□□□□ -2.06
VAPBO95292 UBE2Q2P1-202ENST00000354771 883 ntBASIC2.17□□□□□ -2.06
VAPBO95292 RNA5SP37-201ENST00000365420 130 ntBASIC2.17□□□□□ -2.06
VAPBO95292 AL450338.1-201ENST00000407987 512 ntBASIC2.17□□□□□ -2.06
VAPBO95292 RNU4-53P-201ENST00000410828 140 ntBASIC2.17□□□□□ -2.06
VAPBO95292 MTND1P23-201ENST00000416931 372 ntBASIC2.17□□□□□ -2.06
VAPBO95292 AC092634.2-201ENST00000428146 1010 ntBASIC2.17□□□□□ -2.06
VAPBO95292 AC097347.1-201ENST00000438499 517 ntTSL 3 BASIC2.17□□□□□ -2.06
VAPBO95292 OFD1P7Y-201ENST00000454643 1155 ntBASIC2.17□□□□□ -2.06
VAPBO95292 AL445465.2-201ENST00000455530 461 ntTSL 2 BASIC2.17□□□□□ -2.06
VAPBO95292 LINC02053-202ENST00000488262 940 ntTSL 1 (best) BASIC2.17□□□□□ -2.06
VAPBO95292 AC026414.1-201ENST00000504046 698 ntBASIC2.17□□□□□ -2.06
VAPBO95292 AC023141.11-201ENST00000508864 202 ntBASIC2.17□□□□□ -2.06
VAPBO95292 AC093677.1-201ENST00000514414 678 ntBASIC2.17□□□□□ -2.06
VAPBO95292 AC110296.1-201ENST00000515680 341 ntTSL 3 BASIC2.17□□□□□ -2.06
VAPBO95292 RNU5F-8P-201ENST00000515941 111 ntBASIC2.17□□□□□ -2.06
VAPBO95292 LINC01932-201ENST00000520323 573 ntTSL 5 BASIC2.17□□□□□ -2.06
VAPBO95292 MTCO3P15-201ENST00000526563 574 ntBASIC2.17□□□□□ -2.06
VAPBO95292 AP001363.1-201ENST00000544108 264 ntTSL 3 BASIC2.17□□□□□ -2.06
VAPBO95292 AC068993.2-201ENST00000546563 395 ntTSL 5 BASIC2.17□□□□□ -2.06
VAPBO95292 AC096558.2-201ENST00000546678 506 ntTSL 3 BASIC2.17□□□□□ -2.06
VAPBO95292 AL352955.1-201ENST00000555490 332 ntTSL 3 BASIC2.17□□□□□ -2.06
VAPBO95292 AC090519.2-201ENST00000559034 655 ntTSL 5 BASIC2.17□□□□□ -2.06
VAPBO95292 ABBA01006766.1-201ENST00000584728 294 ntBASIC2.17□□□□□ -2.06
VAPBO95292 AC008543.4-201ENST00000585694 442 ntTSL 2 BASIC2.17□□□□□ -2.06
VAPBO95292 AC002545.1-201ENST00000592511 181 ntBASIC2.17□□□□□ -2.06
VAPBO95292 AC025594.3-201ENST00000613068 790 ntBASIC2.17□□□□□ -2.06
VAPBO95292 MIR6132-201ENST00000622083 109 ntBASIC2.17□□□□□ -2.06
VAPBO95292 AC068057.2-201ENST00000624047 895 ntBASIC2.17□□□□□ -2.06
VAPBO95292 CU459211.1-201ENST00000635667 749 ntBASIC2.17□□□□□ -2.06
VAPBO95292 AP000553.5-201ENST00000641933 54 ntBASIC2.17□□□□□ -2.06
VAPBO95292 TRIQK-204ENST00000517858 1882 ntTSL 3 BASIC2.17□□□□□ -2.06
VAPBO95292 AK9-203ENST00000368948 2478 ntTSL 5 BASIC2.17□□□□□ -2.06
VAPBO95292 AC080128.1-201ENST00000474389 1917 ntBASIC2.17□□□□□ -2.06
VAPBO95292 KIF20B-202ENST00000371728 6419 ntAPPRIS ALT2 TSL 1 (best) BASIC2.17□□□□□ -2.06
VAPBO95292 ATXN3L-201ENST00000380622 2164 ntAPPRIS P1 BASIC2.16□□□□□ -2.06
VAPBO95292 AC130466.1-201ENST00000636354 4683 ntTSL 5 BASIC2.16□□□□□ -2.06
VAPBO95292 C2orf73-208ENST00000615983 1376 ntTSL 1 (best) BASIC2.16□□□□□ -2.06
VAPBO95292 ANKRD36P1-201ENST00000344424 659 ntBASIC2.16□□□□□ -2.06
VAPBO95292 RNU5E-8P-201ENST00000363502 116 ntBASIC2.16□□□□□ -2.06
VAPBO95292 RNU6-1078P-201ENST00000364522 103 ntBASIC2.16□□□□□ -2.06
VAPBO95292 RNU1-91P-201ENST00000364746 163 ntBASIC2.16□□□□□ -2.06
VAPBO95292 TXNDC8-202ENST00000374510 455 ntAPPRIS P2 TSL 1 (best) BASIC2.16□□□□□ -2.06
VAPBO95292 XGY1-201ENST00000381172 446 ntBASIC2.16□□□□□ -2.06
VAPBO95292 RNU6-1083P-201ENST00000384022 107 ntBASIC2.16□□□□□ -2.06
VAPBO95292 RNU6-1122P-201ENST00000384449 107 ntBASIC2.16□□□□□ -2.06
VAPBO95292 RNU2-33P-201ENST00000410344 192 ntBASIC2.16□□□□□ -2.06
VAPBO95292 RNU2-42P-201ENST00000410697 113 ntBASIC2.16□□□□□ -2.06
VAPBO95292 RNU6-920P-201ENST00000410926 92 ntBASIC2.16□□□□□ -2.06
VAPBO95292 Z75741.2-201ENST00000417272 1167 ntBASIC2.16□□□□□ -2.06
VAPBO95292 AC005005.2-201ENST00000420779 380 ntBASIC2.16□□□□□ -2.06
VAPBO95292 PTP4A1P7-201ENST00000423476 514 ntBASIC2.16□□□□□ -2.06
VAPBO95292 MTND4P6-201ENST00000438297 472 ntBASIC2.16□□□□□ -2.06
VAPBO95292 OSTCP8-201ENST00000445117 448 ntBASIC2.16□□□□□ -2.06
VAPBO95292 AL118520.1-201ENST00000450770 291 ntBASIC2.16□□□□□ -2.06
VAPBO95292 RNU6-717P-201ENST00000459076 104 ntBASIC2.16□□□□□ -2.06
VAPBO95292 RPS20P22-201ENST00000473700 357 ntBASIC2.16□□□□□ -2.06
VAPBO95292 AC109486.1-201ENST00000486833 374 ntBASIC2.16□□□□□ -2.06
VAPBO95292 LINC02465-201ENST00000507099 532 ntTSL 4 BASIC2.16□□□□□ -2.06
VAPBO95292 AC011377.1-201ENST00000517708 275 ntTSL 3 BASIC2.16□□□□□ -2.06
VAPBO95292 PPP1R42-212ENST00000522909 1282 ntAPPRIS ALT2 TSL 5 BASIC2.16□□□□□ -2.06
VAPBO95292 AC104417.1-201ENST00000523974 751 ntBASIC2.16□□□□□ -2.06
VAPBO95292 RRAS2-210ENST00000534746 993 ntTSL 2 BASIC2.16□□□□□ -2.06
VAPBO95292 AF131215.7-201ENST00000602443 707 ntBASIC2.16□□□□□ -2.06
VAPBO95292 LINC01002-202ENST00000631412 459 ntTSL 5 BASIC2.16□□□□□ -2.06
Retrieved 100 of 98,524 protein–RNA pairs in 142.2 ms