Protein–RNA interactions for Protein: O94985

CLSTN1, Calsyntenin-1, humanhuman

Predictions only

Length 981 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN1O94985 LINC01707-201ENST00000425517 627 ntTSL 3 BASIC4.54□□□□□ -1.68
CLSTN1O94985 USP9YP18-201ENST00000425912 695 ntBASIC4.54□□□□□ -1.68
CLSTN1O94985 AL121872.1-202ENST00000435867 308 ntTSL 5 BASIC4.54□□□□□ -1.68
CLSTN1O94985 MTATP6P13-201ENST00000438531 667 ntBASIC4.54□□□□□ -1.68
CLSTN1O94985 AF228730.2-201ENST00000438784 848 ntBASIC4.54□□□□□ -1.68
CLSTN1O94985 AC018643.1-201ENST00000445459 414 ntTSL 5 BASIC4.54□□□□□ -1.68
CLSTN1O94985 DDX3P2-201ENST00000446138 111 ntBASIC4.54□□□□□ -1.68
CLSTN1O94985 CACYBPP2-201ENST00000453625 678 ntBASIC4.54□□□□□ -1.68
CLSTN1O94985 AL135752.1-201ENST00000479477 471 ntBASIC4.54□□□□□ -1.68
CLSTN1O94985 AL160314.1-201ENST00000490836 438 ntBASIC4.54□□□□□ -1.68
CLSTN1O94985 CEACAMP10-202ENST00000495431 496 ntBASIC4.54□□□□□ -1.68
CLSTN1O94985 RNU6-1231P-201ENST00000517185 103 ntBASIC4.54□□□□□ -1.68
CLSTN1O94985 ADI1P3-201ENST00000549509 470 ntBASIC4.54□□□□□ -1.68
CLSTN1O94985 MTCO3P24-201ENST00000572729 782 ntBASIC4.54□□□□□ -1.68
CLSTN1O94985 AC007001.1-201ENST00000590912 670 ntTSL 5 BASIC4.54□□□□□ -1.68
CLSTN1O94985 AL670379.4-201ENST00000605279 254 ntBASIC4.54□□□□□ -1.68
CLSTN1O94985 AC012409.4-201ENST00000612923 249 ntBASIC4.54□□□□□ -1.68
CLSTN1O94985 AC027309.3-201ENST00000623419 351 ntBASIC4.54□□□□□ -1.68
CLSTN1O94985 LINC01090-203ENST00000632331 466 ntTSL 5 BASIC4.54□□□□□ -1.68
CLSTN1O94985 ATM-228ENST00000639240 498 ntTSL 5 BASIC4.54□□□□□ -1.68
CLSTN1O94985 ATM-230ENST00000640388 578 ntTSL 5 BASIC4.54□□□□□ -1.68
CLSTN1O94985 IDE-202ENST00000371581 4480 ntTSL 2 BASIC4.54□□□□□ -1.68
CLSTN1O94985 SAMD3-214ENST00000532763 3690 ntTSL 5 BASIC4.54□□□□□ -1.68
CLSTN1O94985 EPS15-202ENST00000371730 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC4.54□□□□□ -1.68
CLSTN1O94985 AL365440.2-201ENST00000419738 2597 ntTSL 2 BASIC4.54□□□□□ -1.68
CLSTN1O94985 CCDC168-201ENST00000322527 21466 ntAPPRIS P1 TSL 3 BASIC4.53□□□□□ -1.68
CLSTN1O94985 KNTC1-205ENST00000450485 3655 ntTSL 2 BASIC4.53□□□□□ -1.68
CLSTN1O94985 RNA5SP366-201ENST00000365454 123 ntBASIC4.53□□□□□ -1.68
CLSTN1O94985 WFDC6-202ENST00000372670 620 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
CLSTN1O94985 DPRX-201ENST00000376650 648 ntAPPRIS P1 TSL 3 BASIC4.53□□□□□ -1.68
CLSTN1O94985 Y_RNA.450-201ENST00000384198 113 ntBASIC4.53□□□□□ -1.68
CLSTN1O94985 Y_RNA.481-201ENST00000384373 102 ntBASIC4.53□□□□□ -1.68
CLSTN1O94985 RNU6-817P-201ENST00000391083 104 ntBASIC4.53□□□□□ -1.68
CLSTN1O94985 SNORA3C-201ENST00000408792 125 ntBASIC4.53□□□□□ -1.68
CLSTN1O94985 RPL30P2-201ENST00000414021 291 ntBASIC4.53□□□□□ -1.68
CLSTN1O94985 AC108032.1-201ENST00000416706 207 ntBASIC4.53□□□□□ -1.68
CLSTN1O94985 MTCO1P20-201ENST00000425366 358 ntBASIC4.53□□□□□ -1.68
CLSTN1O94985 AL592045.1-201ENST00000429867 352 ntBASIC4.53□□□□□ -1.68
CLSTN1O94985 AL354936.1-201ENST00000441521 649 ntTSL 5 BASIC4.53□□□□□ -1.68
CLSTN1O94985 AC003071.1-201ENST00000451219 789 ntBASIC4.53□□□□□ -1.68
CLSTN1O94985 AC104472.2-201ENST00000469035 601 ntBASIC4.53□□□□□ -1.68
CLSTN1O94985 ATP5J2-209ENST00000488775 306 ntTSL 2 BASIC4.53□□□□□ -1.68
CLSTN1O94985 RPL39P36-201ENST00000490784 156 ntBASIC4.53□□□□□ -1.68
CLSTN1O94985 RPL30P5-201ENST00000494923 336 ntBASIC4.53□□□□□ -1.68
CLSTN1O94985 RPL29P14-201ENST00000495837 428 ntBASIC4.53□□□□□ -1.68
CLSTN1O94985 APOOP4-201ENST00000513530 597 ntBASIC4.53□□□□□ -1.68
CLSTN1O94985 AC016598.2-201ENST00000514942 525 ntTSL 5 BASIC4.53□□□□□ -1.68
CLSTN1O94985 RNA5SP503-201ENST00000517047 117 ntBASIC4.53□□□□□ -1.68
CLSTN1O94985 RNA5SP290-201ENST00000517133 127 ntBASIC4.53□□□□□ -1.68
CLSTN1O94985 TRIQK-207ENST00000519069 598 ntTSL 4 BASIC4.53□□□□□ -1.68
CLSTN1O94985 DEUP1-203ENST00000527307 767 ntTSL 3 BASIC4.53□□□□□ -1.68
CLSTN1O94985 SNHG1-210ENST00000539303 240 ntTSL 3 BASIC4.53□□□□□ -1.68
CLSTN1O94985 UTS2-201ENST00000054668 420 ntAPPRIS P4 TSL 1 (best) BASIC4.53□□□□□ -1.68
CLSTN1O94985 TMEM106C-220ENST00000552561 810 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
CLSTN1O94985 AC016597.1-201ENST00000564893 528 ntTSL 4 BASIC4.53□□□□□ -1.68
CLSTN1O94985 AL606490.9-201ENST00000603331 271 ntBASIC4.53□□□□□ -1.68
CLSTN1O94985 AC174048.1-201ENST00000603389 144 ntBASIC4.53□□□□□ -1.68
CLSTN1O94985 AL161798.1-201ENST00000604630 131 ntBASIC4.53□□□□□ -1.68
CLSTN1O94985 UBE2Q2P6-201ENST00000612666 153 ntBASIC4.53□□□□□ -1.68
CLSTN1O94985 VPS8-228ENST00000628962 207 ntTSL 5 BASIC4.53□□□□□ -1.68
CLSTN1O94985 AL109837.2-201ENST00000632608 295 ntTSL 3 BASIC4.53□□□□□ -1.68
CLSTN1O94985 POSTN-202ENST00000379743 3196 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
CLSTN1O94985 LRRC39-201ENST00000342895 1881 ntAPPRIS P1 TSL 5 BASIC4.53□□□□□ -1.68
CLSTN1O94985 NXPE1-204ENST00000536271 2289 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
CLSTN1O94985 RPS4XP5-202ENST00000449995 1334 ntBASIC4.52□□□□□ -1.69
CLSTN1O94985 CCDC82-202ENST00000423339 1878 ntAPPRIS P2 TSL 1 (best) BASIC4.52□□□□□ -1.69
CLSTN1O94985 RNU6-996P-201ENST00000365438 107 ntBASIC4.52□□□□□ -1.69
CLSTN1O94985 RNU6-741P-201ENST00000383889 107 ntBASIC4.52□□□□□ -1.69
CLSTN1O94985 SNORA69-201ENST00000383895 132 ntBASIC4.52□□□□□ -1.69
CLSTN1O94985 RNU1-89P-201ENST00000384592 164 ntBASIC4.52□□□□□ -1.69
CLSTN1O94985 MDM2-208ENST00000393410 732 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
CLSTN1O94985 CISD1P1-201ENST00000393907 327 ntBASIC4.52□□□□□ -1.69
CLSTN1O94985 RNU2-33P-201ENST00000410344 192 ntBASIC4.52□□□□□ -1.69
CLSTN1O94985 USP9YP27-201ENST00000418455 438 ntBASIC4.52□□□□□ -1.69
CLSTN1O94985 AL109913.1-201ENST00000421173 514 ntBASIC4.52□□□□□ -1.69
CLSTN1O94985 AC114808.2-201ENST00000428335 536 ntTSL 4 BASIC4.52□□□□□ -1.69
CLSTN1O94985 AC011742.1-201ENST00000431448 434 ntBASIC4.52□□□□□ -1.69
CLSTN1O94985 AL512844.2-201ENST00000433990 593 ntBASIC4.52□□□□□ -1.69
CLSTN1O94985 AC083863.1-201ENST00000438811 231 ntBASIC4.52□□□□□ -1.69
CLSTN1O94985 RPL23AP89-201ENST00000439324 255 ntBASIC4.52□□□□□ -1.69
CLSTN1O94985 AC016691.1-201ENST00000441321 413 ntBASIC4.52□□□□□ -1.69
CLSTN1O94985 RPL21P133-201ENST00000443666 476 ntBASIC4.52□□□□□ -1.69
CLSTN1O94985 AL118520.1-201ENST00000450770 291 ntBASIC4.52□□□□□ -1.69
CLSTN1O94985 AL356010.1-201ENST00000456364 102 ntBASIC4.52□□□□□ -1.69
CLSTN1O94985 RPS23P7-201ENST00000466210 444 ntBASIC4.52□□□□□ -1.69
CLSTN1O94985 AC026353.1-201ENST00000470523 558 ntTSL 2 BASIC4.52□□□□□ -1.69
CLSTN1O94985 RNA5SP401-201ENST00000515920 127 ntBASIC4.52□□□□□ -1.69
CLSTN1O94985 RNU6-1281P-201ENST00000516223 105 ntBASIC4.52□□□□□ -1.69
CLSTN1O94985 AC084879.2-201ENST00000551656 369 ntTSL 3 BASIC4.52□□□□□ -1.69
CLSTN1O94985 TRAV28-201ENST00000557548 323 ntBASIC4.52□□□□□ -1.69
CLSTN1O94985 AC007495.2-202ENST00000564102 535 ntTSL 4 BASIC4.52□□□□□ -1.69
CLSTN1O94985 FAM27D1-201ENST00000612308 341 ntBASIC4.52□□□□□ -1.69
CLSTN1O94985 MIR3653-201ENST00000625572 110 ntBASIC4.52□□□□□ -1.69
CLSTN1O94985 SLC16A10-201ENST00000368850 10051 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
CLSTN1O94985 CCDC91-201ENST00000381259 2334 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
CLSTN1O94985 CNOT6L-201ENST00000504123 8843 ntAPPRIS P1 TSL 2 BASIC4.52□□□□□ -1.69
CLSTN1O94985 CDH10-201ENST00000264463 3438 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
CLSTN1O94985 AC006020.1-201ENST00000420179 1854 ntBASIC4.52□□□□□ -1.69
CLSTN1O94985 CCNH-206ENST00000508855 2391 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
CLSTN1O94985 ZGRF1-212ENST00000612287 2176 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 113.7 ms