Protein–RNA interactions for Protein: O76039

CDKL5, Cyclin-dependent kinase-like 5, humanhuman

Predictions only

Length 1,030 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL5O76039 Y_RNA.255-201ENST00000364581 97 ntBASIC4.19□□□□□ -1.74
CDKL5O76039 RNY3P13-201ENST00000365542 102 ntBASIC4.19□□□□□ -1.74
CDKL5O76039 RNU6-39P-201ENST00000384344 107 ntBASIC4.19□□□□□ -1.74
CDKL5O76039 U8.11-201ENST00000384699 133 ntBASIC4.19□□□□□ -1.74
CDKL5O76039 U8.12-201ENST00000384701 133 ntBASIC4.19□□□□□ -1.74
CDKL5O76039 AL590704.1-201ENST00000402856 794 ntBASIC4.19□□□□□ -1.74
CDKL5O76039 U3.39-201ENST00000408569 239 ntBASIC4.19□□□□□ -1.74
CDKL5O76039 RPS12P23-201ENST00000419579 400 ntBASIC4.19□□□□□ -1.74
CDKL5O76039 RPL35AP12-201ENST00000425362 338 ntBASIC4.19□□□□□ -1.74
CDKL5O76039 MTCO3P46-201ENST00000425787 232 ntBASIC4.19□□□□□ -1.74
CDKL5O76039 AL365400.1-201ENST00000431854 640 ntBASIC4.19□□□□□ -1.74
CDKL5O76039 AC127537.2-201ENST00000439258 465 ntBASIC4.19□□□□□ -1.74
CDKL5O76039 AC007099.2-201ENST00000444852 336 ntTSL 5 BASIC4.19□□□□□ -1.74
CDKL5O76039 LINC01005-202ENST00000451440 531 ntTSL 4 BASIC4.19□□□□□ -1.74
CDKL5O76039 AC092264.1-201ENST00000456002 713 ntTSL 5 BASIC4.19□□□□□ -1.74
CDKL5O76039 U8.18-201ENST00000459285 133 ntBASIC4.19□□□□□ -1.74
CDKL5O76039 AC100773.1-201ENST00000505409 520 ntTSL 5 BASIC4.19□□□□□ -1.74
CDKL5O76039 HSPD1P15-201ENST00000505573 1122 ntBASIC4.19□□□□□ -1.74
CDKL5O76039 AC093689.1-201ENST00000514737 246 ntTSL 5 BASIC4.19□□□□□ -1.74
CDKL5O76039 RNU2-27P-201ENST00000516185 142 ntBASIC4.19□□□□□ -1.74
CDKL5O76039 RNU4ATAC10P-201ENST00000516967 122 ntBASIC4.19□□□□□ -1.74
CDKL5O76039 AC107953.1-201ENST00000522216 297 ntBASIC4.19□□□□□ -1.74
CDKL5O76039 AC114550.2-201ENST00000524008 397 ntTSL 3 BASIC4.19□□□□□ -1.74
CDKL5O76039 AC022690.1-201ENST00000526681 550 ntBASIC4.19□□□□□ -1.74
CDKL5O76039 AL160191.1-202ENST00000554008 576 ntTSL 4 BASIC4.19□□□□□ -1.74
CDKL5O76039 AL121821.1-201ENST00000557067 530 ntTSL 3 BASIC4.19□□□□□ -1.74
CDKL5O76039 AC079203.2-201ENST00000559867 387 ntTSL 2 BASIC4.19□□□□□ -1.74
CDKL5O76039 PWRN1-202ENST00000562501 642 ntTSL 3 BASIC4.19□□□□□ -1.74
CDKL5O76039 FOPNL-205ENST00000573429 646 ntTSL 3 BASIC4.19□□□□□ -1.74
CDKL5O76039 AC010928.3-201ENST00000587712 541 ntBASIC4.19□□□□□ -1.74
CDKL5O76039 GLUD1P4-201ENST00000590914 418 ntBASIC4.19□□□□□ -1.74
CDKL5O76039 KC877982.1-201ENST00000602313 470 ntBASIC4.19□□□□□ -1.74
CDKL5O76039 AC004542.2-201ENST00000602847 546 ntTSL 3 BASIC4.19□□□□□ -1.74
CDKL5O76039 AC027045.1-201ENST00000609065 202 ntTSL 5 BASIC4.19□□□□□ -1.74
CDKL5O76039 AC105429.2-201ENST00000610567 517 ntBASIC4.19□□□□□ -1.74
CDKL5O76039 AC092628.2-201ENST00000622492 339 ntBASIC4.19□□□□□ -1.74
CDKL5O76039 RPS4Y2-201ENST00000629237 792 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
CDKL5O76039 FOXP2-227ENST00000638397 240 ntTSL 5 BASIC4.19□□□□□ -1.74
CDKL5O76039 AMY2A-201ENST00000414303 1634 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
CDKL5O76039 KIAA1109-203ENST00000388738 15574 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
CDKL5O76039 SULT1B1-201ENST00000310613 7115 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
CDKL5O76039 CCDC146-201ENST00000285871 3333 ntAPPRIS P2 TSL 1 (best) BASIC4.19□□□□□ -1.74
CDKL5O76039 FIGNL1-201ENST00000356889 3471 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
CDKL5O76039 LCA5L-218ENST00000485895 2551 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
CDKL5O76039 MCF2-210ENST00000536274 3461 ntAPPRIS ALT2 TSL 2 BASIC4.18□□□□□ -1.74
CDKL5O76039 MBNL1-220ENST00000493459 4205 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
CDKL5O76039 OR4G1P-203ENST00000641984 1631 ntBASIC4.18□□□□□ -1.74
CDKL5O76039 FOXP2-206ENST00000393491 6085 ntTSL 5 BASIC4.18□□□□□ -1.74
CDKL5O76039 OR1S2-201ENST00000302592 978 ntBASIC4.18□□□□□ -1.74
CDKL5O76039 DEFB108B-201ENST00000328698 222 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
CDKL5O76039 RNU5E-8P-201ENST00000363502 116 ntBASIC4.18□□□□□ -1.74
CDKL5O76039 Y_RNA.367-201ENST00000365544 101 ntBASIC4.18□□□□□ -1.74
CDKL5O76039 C1orf100-202ENST00000366537 483 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
CDKL5O76039 Y_RNA.419-201ENST00000384041 102 ntBASIC4.18□□□□□ -1.74
CDKL5O76039 TRAV8-1-201ENST00000390430 473 ntAPPRIS P1 BASIC4.18□□□□□ -1.74
CDKL5O76039 ATP5A1P2-201ENST00000412323 255 ntBASIC4.18□□□□□ -1.74
CDKL5O76039 AL162394.1-201ENST00000413271 419 ntTSL 2 BASIC4.18□□□□□ -1.74
CDKL5O76039 AL109924.3-201ENST00000413324 393 ntTSL 2 BASIC4.18□□□□□ -1.74
CDKL5O76039 AC137499.1-201ENST00000427602 88 ntBASIC4.18□□□□□ -1.74
CDKL5O76039 C21orf91-OT1-202ENST00000430815 717 ntTSL 5 BASIC4.18□□□□□ -1.74
CDKL5O76039 NOTCH2P1-201ENST00000443481 624 ntBASIC4.18□□□□□ -1.74
CDKL5O76039 AL356010.1-201ENST00000456364 102 ntBASIC4.18□□□□□ -1.74
CDKL5O76039 RPS4XP10-201ENST00000465034 731 ntBASIC4.18□□□□□ -1.74
CDKL5O76039 AC121764.1-201ENST00000472238 563 ntTSL 4 BASIC4.18□□□□□ -1.74
CDKL5O76039 AC103851.1-201ENST00000506833 274 ntBASIC4.18□□□□□ -1.74
CDKL5O76039 LINC02283-201ENST00000511634 474 ntTSL 3 BASIC4.18□□□□□ -1.74
CDKL5O76039 ABCA17P-206ENST00000512848 467 ntTSL 2 BASIC4.18□□□□□ -1.74
CDKL5O76039 RNU6-277P-201ENST00000516272 106 ntBASIC4.18□□□□□ -1.74
CDKL5O76039 RNU7-30P-201ENST00000516835 62 ntBASIC4.18□□□□□ -1.74
CDKL5O76039 BTF3P12-201ENST00000519620 469 ntBASIC4.18□□□□□ -1.74
CDKL5O76039 AC100768.1-201ENST00000525512 506 ntTSL 3 BASIC4.18□□□□□ -1.74
CDKL5O76039 STX3-204ENST00000530221 534 ntTSL 5 BASIC4.18□□□□□ -1.74
CDKL5O76039 AC136475.4-201ENST00000534271 280 ntTSL 5 BASIC4.18□□□□□ -1.74
CDKL5O76039 NACA-211ENST00000548563 827 ntTSL 5 BASIC4.18□□□□□ -1.74
CDKL5O76039 AC008083.3-202ENST00000552063 277 ntTSL 3 BASIC4.18□□□□□ -1.74
CDKL5O76039 AC011611.1-201ENST00000552179 197 ntBASIC4.18□□□□□ -1.74
CDKL5O76039 AL049779.1-201ENST00000553306 670 ntTSL 2 BASIC4.18□□□□□ -1.74
CDKL5O76039 LINC02328-203ENST00000557195 682 ntTSL 3 BASIC4.18□□□□□ -1.74
CDKL5O76039 AL355375.2-201ENST00000574825 175 ntBASIC4.18□□□□□ -1.74
CDKL5O76039 AC105224.1-201ENST00000587055 421 ntBASIC4.18□□□□□ -1.74
CDKL5O76039 AC243960.4-201ENST00000600532 288 ntBASIC4.18□□□□□ -1.74
CDKL5O76039 AC004853.1-201ENST00000604902 698 ntBASIC4.18□□□□□ -1.74
CDKL5O76039 RMST_7.1-201ENST00000621935 268 ntBASIC4.18□□□□□ -1.74
CDKL5O76039 AL160413.1-201ENST00000622780 310 ntBASIC4.18□□□□□ -1.74
CDKL5O76039 U6.98-201ENST00000637157 84 ntBASIC4.18□□□□□ -1.74
CDKL5O76039 FTO-223ENST00000640179 210 ntTSL 5 BASIC4.18□□□□□ -1.74
CDKL5O76039 AC025164.2-202ENST00000499685 5699 ntTSL 3 BASIC4.18□□□□□ -1.74
CDKL5O76039 ELAVL2-204ENST00000397312 3805 ntAPPRIS P3 TSL 1 (best) BASIC4.18□□□□□ -1.74
CDKL5O76039 ATXN3-248ENST00000558190 26812 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
CDKL5O76039 CENPJ-205ENST00000545981 4299 ntTSL 2 BASIC4.18□□□□□ -1.74
CDKL5O76039 RGS21-201ENST00000417209 1794 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
CDKL5O76039 KCNJ16-203ENST00000392671 3981 ntAPPRIS P1 TSL 2 BASIC4.17□□□□□ -1.74
CDKL5O76039 AC007656.2-201ENST00000624902 4547 ntBASIC4.17□□□□□ -1.74
CDKL5O76039 ZNF483-201ENST00000309235 3655 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
CDKL5O76039 Y_RNA.22-201ENST00000362492 102 ntBASIC4.17□□□□□ -1.74
CDKL5O76039 RNU5A-8P-201ENST00000364102 114 ntBASIC4.17□□□□□ -1.74
CDKL5O76039 SNORA51.2-201ENST00000364595 132 ntBASIC4.17□□□□□ -1.74
CDKL5O76039 RNA5SP479-201ENST00000364858 117 ntBASIC4.17□□□□□ -1.74
CDKL5O76039 RNA5SP235-201ENST00000365411 114 ntBASIC4.17□□□□□ -1.74
CDKL5O76039 RNU6-996P-201ENST00000365438 107 ntBASIC4.17□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 98.1 ms