Protein–RNA interactions for Protein: O75351

VPS4B, Vacuolar protein sorting-associated protein 4B, humanhuman

Predictions only

Length 444 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS4BO75351 AC018630.2-202ENST00000422992 927 ntBASIC3.95□□□□□ -1.78
VPS4BO75351 MTCO3P46-201ENST00000425787 232 ntBASIC3.95□□□□□ -1.78
VPS4BO75351 LINC02095-201ENST00000430908 346 ntTSL 2 BASIC3.95□□□□□ -1.78
VPS4BO75351 ATP5JP1-201ENST00000431631 322 ntBASIC3.95□□□□□ -1.78
VPS4BO75351 GOT2P5-201ENST00000433995 546 ntBASIC3.95□□□□□ -1.78
VPS4BO75351 ARHGEF7-AS1-201ENST00000435037 321 ntTSL 3 BASIC3.95□□□□□ -1.78
VPS4BO75351 AL139289.1-201ENST00000436713 731 ntTSL 3 BASIC3.95□□□□□ -1.78
VPS4BO75351 AL451129.1-201ENST00000437471 285 ntTSL 3 BASIC3.95□□□□□ -1.78
VPS4BO75351 UBE2V1P7-201ENST00000446395 340 ntBASIC3.95□□□□□ -1.78
VPS4BO75351 MTND1P18-201ENST00000448191 573 ntBASIC3.95□□□□□ -1.78
VPS4BO75351 AL078587.1-201ENST00000448580 542 ntTSL 5 BASIC3.95□□□□□ -1.78
VPS4BO75351 AC005871.1-201ENST00000450247 475 ntTSL 3 BASIC3.95□□□□□ -1.78
VPS4BO75351 AC099794.1-201ENST00000450811 447 ntTSL 3 BASIC3.95□□□□□ -1.78
VPS4BO75351 AC092001.1-201ENST00000453012 261 ntBASIC3.95□□□□□ -1.78
VPS4BO75351 AL080313.2-201ENST00000456440 489 ntTSL 3 BASIC3.95□□□□□ -1.78
VPS4BO75351 RPS29P15-201ENST00000458329 171 ntBASIC3.95□□□□□ -1.78
VPS4BO75351 PTP4A2-203ENST00000470404 575 ntTSL 3 BASIC3.95□□□□□ -1.78
VPS4BO75351 AC110792.1-201ENST00000491826 472 ntBASIC3.95□□□□□ -1.78
VPS4BO75351 AC069360.1-201ENST00000503469 431 ntTSL 2 BASIC3.95□□□□□ -1.78
VPS4BO75351 AC091885.1-201ENST00000506658 268 ntBASIC3.95□□□□□ -1.78
VPS4BO75351 AC004062.1-201ENST00000509926 645 ntBASIC3.95□□□□□ -1.78
VPS4BO75351 AC098591.2-201ENST00000510152 315 ntBASIC3.95□□□□□ -1.78
VPS4BO75351 MTND3P22-201ENST00000510932 243 ntBASIC3.95□□□□□ -1.78
VPS4BO75351 AC010451.3-201ENST00000511721 444 ntTSL 3 BASIC3.95□□□□□ -1.78
VPS4BO75351 PANCR-202ENST00000513690 448 ntTSL 2 BASIC3.95□□□□□ -1.78
VPS4BO75351 AC010280.1-201ENST00000515199 340 ntTSL 2 BASIC3.95□□□□□ -1.78
VPS4BO75351 TRAV8-5-201ENST00000537369 341 ntBASIC3.95□□□□□ -1.78
VPS4BO75351 AL445074.1-201ENST00000555362 318 ntTSL 2 BASIC3.95□□□□□ -1.78
VPS4BO75351 AC076968.1-201ENST00000566418 429 ntTSL 5 BASIC3.95□□□□□ -1.78
VPS4BO75351 AC022968.1-201ENST00000567372 442 ntBASIC3.95□□□□□ -1.78
VPS4BO75351 AC022655.2-201ENST00000577280 318 ntBASIC3.95□□□□□ -1.78
VPS4BO75351 LIVAR-201ENST00000578633 384 ntTSL 3 BASIC3.95□□□□□ -1.78
VPS4BO75351 AC015967.1-201ENST00000619893 476 ntBASIC3.95□□□□□ -1.78
VPS4BO75351 AL359697.1-201ENST00000624879 587 ntBASIC3.95□□□□□ -1.78
VPS4BO75351 TTN-AS1-263ENST00000627527 784 ntTSL 5 BASIC3.95□□□□□ -1.78
VPS4BO75351 FGD4-213ENST00000546442 3503 ntTSL 5 BASIC3.95□□□□□ -1.78
VPS4BO75351 OTUD6B-AS1-201ENST00000522817 4275 ntTSL 2 BASIC3.95□□□□□ -1.78
VPS4BO75351 R3HDM1-220ENST00000628915 4325 ntTSL 5 BASIC3.95□□□□□ -1.78
VPS4BO75351 TARID-205ENST00000607033 2960 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
VPS4BO75351 FAM126B-202ENST00000418596 9333 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
VPS4BO75351 CRB1-201ENST00000367397 9023 ntTSL 2 BASIC3.95□□□□□ -1.78
VPS4BO75351 MGA-211ENST00000570161 11859 ntAPPRIS P4 TSL 5 BASIC3.95□□□□□ -1.78
VPS4BO75351 CYP3A4-201ENST00000336411 2153 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
VPS4BO75351 SYT14-204ENST00000472886 2966 ntAPPRIS P3 TSL 1 (best) BASIC3.94□□□□□ -1.78
VPS4BO75351 NR5A2-201ENST00000236914 3115 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
VPS4BO75351 GABPAP-201ENST00000419271 1356 ntBASIC3.94□□□□□ -1.78
VPS4BO75351 TMEM68-218ENST00000617782 2477 ntAPPRIS P1 TSL 5 BASIC3.94□□□□□ -1.78
VPS4BO75351 AC009812.4-201ENST00000569134 1805 ntBASIC3.94□□□□□ -1.78
VPS4BO75351 NACAP2-201ENST00000318548 624 ntBASIC3.94□□□□□ -1.78
VPS4BO75351 SNORA60-201ENST00000362396 134 ntBASIC3.94□□□□□ -1.78
VPS4BO75351 SNORA63.1-201ENST00000362493 131 ntBASIC3.94□□□□□ -1.78
VPS4BO75351 Y_RNA.231-201ENST00000364358 102 ntBASIC3.94□□□□□ -1.78
VPS4BO75351 RNU4-20P-201ENST00000365601 151 ntBASIC3.94□□□□□ -1.78
VPS4BO75351 SMIM11P1-201ENST00000369586 178 ntBASIC3.94□□□□□ -1.78
VPS4BO75351 RNU6-76P-201ENST00000384060 104 ntBASIC3.94□□□□□ -1.78
VPS4BO75351 RNU6-38P-201ENST00000384085 107 ntBASIC3.94□□□□□ -1.78
VPS4BO75351 SNORD3H-201ENST00000384486 214 ntBASIC3.94□□□□□ -1.78
VPS4BO75351 MT-TD-201ENST00000387419 68 ntBASIC3.94□□□□□ -1.78
VPS4BO75351 RNU6-332P-201ENST00000391193 108 ntBASIC3.94□□□□□ -1.78
VPS4BO75351 AL590704.1-201ENST00000402856 794 ntBASIC3.94□□□□□ -1.78
VPS4BO75351 MIR1183-201ENST00000408856 89 ntBASIC3.94□□□□□ -1.78
VPS4BO75351 RNU6-387P-201ENST00000411331 105 ntBASIC3.94□□□□□ -1.78
VPS4BO75351 GRM7-AS1-201ENST00000420230 430 ntTSL 3 BASIC3.94□□□□□ -1.78
VPS4BO75351 COX6B1P7-201ENST00000430845 235 ntBASIC3.94□□□□□ -1.78
VPS4BO75351 KCTD9P3-201ENST00000434597 1169 ntBASIC3.94□□□□□ -1.78
VPS4BO75351 SPIN4-AS1-201ENST00000451979 426 ntTSL 2 BASIC3.94□□□□□ -1.78
VPS4BO75351 MTND3P16-201ENST00000452205 344 ntBASIC3.94□□□□□ -1.78
VPS4BO75351 AC092264.1-201ENST00000456002 713 ntTSL 5 BASIC3.94□□□□□ -1.78
VPS4BO75351 RNU6-333P-201ENST00000459117 107 ntBASIC3.94□□□□□ -1.78
VPS4BO75351 RNU7-180P-201ENST00000459240 63 ntBASIC3.94□□□□□ -1.78
VPS4BO75351 AF213884.1-201ENST00000488102 463 ntBASIC3.94□□□□□ -1.78
VPS4BO75351 HMGB1P22-201ENST00000505315 124 ntBASIC3.94□□□□□ -1.78
VPS4BO75351 LINC01333-201ENST00000508083 724 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
VPS4BO75351 RNU4-29P-201ENST00000515943 174 ntBASIC3.94□□□□□ -1.78
VPS4BO75351 Vault.1-201ENST00000516474 102 ntBASIC3.94□□□□□ -1.78
VPS4BO75351 AC025524.1-201ENST00000518489 606 ntTSL 4 BASIC3.94□□□□□ -1.78
VPS4BO75351 AC009597.1-201ENST00000521215 584 ntTSL 4 BASIC3.94□□□□□ -1.78
VPS4BO75351 PSMA2P1-201ENST00000526365 646 ntBASIC3.94□□□□□ -1.78
VPS4BO75351 PIGY-201ENST00000527353 217 ntAPPRIS P1 BASIC3.94□□□□□ -1.78
VPS4BO75351 OR5AL2P-201ENST00000532185 920 ntBASIC3.94□□□□□ -1.78
VPS4BO75351 AC023050.3-201ENST00000541142 333 ntBASIC3.94□□□□□ -1.78
VPS4BO75351 AC005908.2-201ENST00000546078 530 ntTSL 3 BASIC3.94□□□□□ -1.78
VPS4BO75351 BNIP3P6-201ENST00000549284 499 ntBASIC3.94□□□□□ -1.78
VPS4BO75351 AC093012.1-202ENST00000549403 582 ntBASIC3.94□□□□□ -1.78
VPS4BO75351 AC116003.1-202ENST00000579386 501 ntTSL 3 BASIC3.94□□□□□ -1.78
VPS4BO75351 CCDC178-211ENST00000581852 876 ntAPPRIS ALT2 TSL 2 BASIC3.94□□□□□ -1.78
VPS4BO75351 AC020914.4-201ENST00000597690 277 ntBASIC3.94□□□□□ -1.78
VPS4BO75351 RNU6-89P-201ENST00000606519 100 ntBASIC3.94□□□□□ -1.78
VPS4BO75351 AC069200.1-201ENST00000609511 323 ntBASIC3.94□□□□□ -1.78
VPS4BO75351 AC084757.4-201ENST00000616350 526 ntBASIC3.94□□□□□ -1.78
VPS4BO75351 AC025034.2-201ENST00000623264 286 ntBASIC3.94□□□□□ -1.78
VPS4BO75351 AC022140.2-201ENST00000623500 188 ntBASIC3.94□□□□□ -1.78
VPS4BO75351 ANGPTL1-202ENST00000367629 2289 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
VPS4BO75351 SUCNR1-201ENST00000362032 4181 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
VPS4BO75351 THOC1-219ENST00000616322 2078 ntAPPRIS ALT1 TSL 5 BASIC3.94□□□□□ -1.78
VPS4BO75351 IFI16-208ENST00000448393 2245 ntAPPRIS ALT2 TSL 5 BASIC3.94□□□□□ -1.78
VPS4BO75351 ARAP2-210ENST00000618163 2592 ntTSL 5 BASIC3.94□□□□□ -1.78
VPS4BO75351 SCOC-202ENST00000394201 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC3.94□□□□□ -1.78
VPS4BO75351 UACA-202ENST00000379983 4859 ntAPPRIS ALT2 TSL 5 BASIC3.94□□□□□ -1.78
VPS4BO75351 ATP2B1-202ENST00000359142 6977 ntTSL 5 BASIC3.94□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 100.5 ms