Protein–RNA interactions for Protein: O60609

GFRA3, GDNF family receptor alpha-3, humanhuman

Predictions only

Length 400 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GFRA3O60609 Y_RNA.617-201ENST00000410920 90 ntBASIC5.41□□□□□ -1.54
GFRA3O60609 ARHGEF7-AS1-201ENST00000435037 321 ntTSL 3 BASIC5.41□□□□□ -1.54
GFRA3O60609 AC009296.1-201ENST00000443146 155 ntBASIC5.41□□□□□ -1.54
GFRA3O60609 AC124916.1-201ENST00000444020 547 ntBASIC5.41□□□□□ -1.54
GFRA3O60609 AC096638.1-201ENST00000444678 216 ntBASIC5.41□□□□□ -1.54
GFRA3O60609 AC098820.1-201ENST00000453157 512 ntTSL 2 BASIC5.41□□□□□ -1.54
GFRA3O60609 ACA64.4-201ENST00000459070 127 ntBASIC5.41□□□□□ -1.54
GFRA3O60609 RNU6-953P-201ENST00000459154 107 ntBASIC5.41□□□□□ -1.54
GFRA3O60609 AC008517.1-201ENST00000502383 585 ntTSL 4 BASIC5.41□□□□□ -1.54
GFRA3O60609 RNU6-1114P-201ENST00000516022 107 ntBASIC5.41□□□□□ -1.54
GFRA3O60609 RNU6-970P-201ENST00000516312 107 ntBASIC5.41□□□□□ -1.54
GFRA3O60609 Y_RNA.692-201ENST00000516627 105 ntBASIC5.41□□□□□ -1.54
GFRA3O60609 RNU6-914P-201ENST00000516749 109 ntBASIC5.41□□□□□ -1.54
GFRA3O60609 AP003400.1-201ENST00000528319 231 ntTSL 5 BASIC5.41□□□□□ -1.54
GFRA3O60609 MSANTD4-206ENST00000617528 508 ntTSL 5 BASIC5.41□□□□□ -1.54
GFRA3O60609 SHMT1-211ENST00000618902 378 ntTSL 5 BASIC5.41□□□□□ -1.54
GFRA3O60609 BNC1-202ENST00000569704 3169 ntAPPRIS ALT2 TSL 5 BASIC5.41□□□□□ -1.54
GFRA3O60609 AC105749.1-201ENST00000631338 2008 ntBASIC5.41□□□□□ -1.54
GFRA3O60609 TERB1-203ENST00000558713 2257 ntAPPRIS P1 TSL 5 BASIC5.41□□□□□ -1.54
GFRA3O60609 TANC2-202ENST00000424789 11721 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
GFRA3O60609 CNOT1-202ENST00000441024 4999 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
GFRA3O60609 ZNF337-202ENST00000376436 3613 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
GFRA3O60609 AL031119.1-201ENST00000404707 1879 ntBASIC5.41□□□□□ -1.54
GFRA3O60609 Z82209.1-201ENST00000422141 2135 ntBASIC5.41□□□□□ -1.54
GFRA3O60609 PTPRZ1-202ENST00000449182 4627 ntAPPRIS ALT2 TSL 1 (best) BASIC5.41□□□□□ -1.54
GFRA3O60609 TNKS-206ENST00000518281 3897 ntTSL 2 BASIC5.41□□□□□ -1.54
GFRA3O60609 PLCB1-211ENST00000617005 6458 ntTSL 5 BASIC5.41□□□□□ -1.54
GFRA3O60609 LIN7C-202ENST00000524596 4290 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
GFRA3O60609 OR4S2-202ENST00000641692 2211 ntAPPRIS P1 BASIC5.4□□□□□ -1.54
GFRA3O60609 AC009779.8-201ENST00000641684 4384 ntBASIC5.4□□□□□ -1.54
GFRA3O60609 FOXM1-202ENST00000359843 3315 ntAPPRIS P4 TSL 1 (best) BASIC5.4□□□□□ -1.54
GFRA3O60609 AP000756.2-201ENST00000624168 2567 ntBASIC5.4□□□□□ -1.54
GFRA3O60609 MFSD8-219ENST00000641228 2559 ntBASIC5.4□□□□□ -1.54
GFRA3O60609 MLIP-206ENST00000502396 3102 ntAPPRIS ALT2 TSL 2 BASIC5.4□□□□□ -1.54
GFRA3O60609 TCF7L2-222ENST00000627217 3680 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
GFRA3O60609 GCNT2-201ENST00000265012 4214 ntAPPRIS P3 TSL 1 (best) BASIC5.4□□□□□ -1.54
GFRA3O60609 CEACAM1-207ENST00000403444 3427 ntAPPRIS ALT2 TSL 1 (best) BASIC5.4□□□□□ -1.54
GFRA3O60609 PTPRO-208ENST00000542557 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC5.4□□□□□ -1.54
GFRA3O60609 ZEB1-205ENST00000446923 6267 ntAPPRIS ALT2 TSL 5 BASIC5.4□□□□□ -1.54
GFRA3O60609 Y_RNA.114-201ENST00000363265 113 ntBASIC5.4□□□□□ -1.54
GFRA3O60609 RNU6-1107P-201ENST00000364817 104 ntBASIC5.4□□□□□ -1.54
GFRA3O60609 SNORA51.5-201ENST00000384126 131 ntBASIC5.4□□□□□ -1.54
GFRA3O60609 SNORA20B-201ENST00000384220 132 ntBASIC5.4□□□□□ -1.54
GFRA3O60609 TRAV8-7-201ENST00000390456 341 ntAPPRIS P1 BASIC5.4□□□□□ -1.54
GFRA3O60609 RNU6-440P-201ENST00000390882 105 ntBASIC5.4□□□□□ -1.54
GFRA3O60609 RNU6-817P-201ENST00000391083 104 ntBASIC5.4□□□□□ -1.54
GFRA3O60609 EIF4EBP2P3-201ENST00000403144 334 ntBASIC5.4□□□□□ -1.54
GFRA3O60609 AL451107.1-201ENST00000416310 408 ntTSL 2 BASIC5.4□□□□□ -1.54
GFRA3O60609 AL121914.1-201ENST00000450188 156 ntBASIC5.4□□□□□ -1.54
GFRA3O60609 KRTAP5-14P-201ENST00000502328 121 ntBASIC5.4□□□□□ -1.54
GFRA3O60609 AC006296.1-201ENST00000514401 591 ntTSL 2 BASIC5.4□□□□□ -1.54
GFRA3O60609 AL160408.5-201ENST00000607759 526 ntTSL 4 BASIC5.4□□□□□ -1.54
GFRA3O60609 AC092628.2-201ENST00000622492 339 ntBASIC5.4□□□□□ -1.54
GFRA3O60609 DNHD1-212ENST00000527990 14298 ntAPPRIS P1 TSL 5 BASIC5.4□□□□□ -1.55
GFRA3O60609 ZFYVE9-202ENST00000357206 4567 ntAPPRIS ALT1 TSL 1 (best) BASIC5.4□□□□□ -1.55
GFRA3O60609 AC015813.6-201ENST00000624409 5808 ntBASIC5.4□□□□□ -1.55
GFRA3O60609 MEF2C-225ENST00000625585 3467 ntAPPRIS ALT1 TSL 5 BASIC5.4□□□□□ -1.55
GFRA3O60609 OR6N2-202ENST00000641131 3455 ntAPPRIS P1 BASIC5.4□□□□□ -1.55
GFRA3O60609 PCGF5-204ENST00000543648 7144 ntAPPRIS P1 TSL 2 BASIC5.4□□□□□ -1.55
GFRA3O60609 SPHKAP-201ENST00000344657 6804 ntAPPRIS P3 TSL 1 (best) BASIC5.4□□□□□ -1.55
GFRA3O60609 AC099654.2-201ENST00000433031 1980 ntBASIC5.4□□□□□ -1.55
GFRA3O60609 RBMS2-201ENST00000262031 8382 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.55
GFRA3O60609 AC007402.1-201ENST00000440698 3939 ntTSL 2 BASIC5.4□□□□□ -1.55
GFRA3O60609 ADAM21-201ENST00000603540 2658 ntAPPRIS P1 TSL 3 BASIC5.4□□□□□ -1.55
GFRA3O60609 AGTR1-204ENST00000418473 2071 ntTSL 5 BASIC5.39□□□□□ -1.55
GFRA3O60609 THOC1-219ENST00000616322 2078 ntAPPRIS ALT1 TSL 5 BASIC5.39□□□□□ -1.55
GFRA3O60609 NABP1-204ENST00000410026 11521 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
GFRA3O60609 HHLA2-211ENST00000619531 2548 ntAPPRIS P3 TSL 5 BASIC5.39□□□□□ -1.55
GFRA3O60609 TTC3-201ENST00000354749 9084 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
GFRA3O60609 CTNND1-212ENST00000525902 4984 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
GFRA3O60609 CTNND1-214ENST00000526772 4966 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
GFRA3O60609 ARHGEF6-201ENST00000250617 6019 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
GFRA3O60609 DNAH12-203ENST00000389536 2613 ntTSL 5 BASIC5.39□□□□□ -1.55
GFRA3O60609 RASGRP1-209ENST00000559830 1910 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
GFRA3O60609 C18orf54-202ENST00000382911 4056 ntTSL 5 BASIC5.39□□□□□ -1.55
GFRA3O60609 Y_RNA.220-201ENST00000364244 109 ntBASIC5.39□□□□□ -1.55
GFRA3O60609 RNA5SP515-201ENST00000364570 118 ntBASIC5.39□□□□□ -1.55
GFRA3O60609 RNU6-1082P-201ENST00000364574 107 ntBASIC5.39□□□□□ -1.55
GFRA3O60609 RNU6-1145P-201ENST00000384246 107 ntBASIC5.39□□□□□ -1.55
GFRA3O60609 MIR134-201ENST00000385258 73 ntBASIC5.39□□□□□ -1.55
GFRA3O60609 MIRLET7F2-201ENST00000385277 83 ntBASIC5.39□□□□□ -1.55
GFRA3O60609 RNU6-710P-201ENST00000410424 105 ntBASIC5.39□□□□□ -1.55
GFRA3O60609 ELOCP21-201ENST00000412558 336 ntBASIC5.39□□□□□ -1.55
GFRA3O60609 GPC5-AS1-201ENST00000419288 393 ntTSL 3 BASIC5.39□□□□□ -1.55
GFRA3O60609 RPS27P1-201ENST00000450552 247 ntBASIC5.39□□□□□ -1.55
GFRA3O60609 AURKAPS2-201ENST00000454983 333 ntBASIC5.39□□□□□ -1.55
GFRA3O60609 MIR892C-201ENST00000516410 77 ntBASIC5.39□□□□□ -1.55
GFRA3O60609 AC018630.3-201ENST00000542637 96 ntBASIC5.39□□□□□ -1.55
GFRA3O60609 LINC01584-202ENST00000563990 852 ntTSL 3 BASIC5.39□□□□□ -1.55
GFRA3O60609 MIR4277-201ENST00000578298 84 ntBASIC5.39□□□□□ -1.55
GFRA3O60609 AC025574.2-201ENST00000615621 514 ntBASIC5.39□□□□□ -1.55
GFRA3O60609 MIR3202-2-201ENST00000635980 79 ntBASIC5.39□□□□□ -1.55
GFRA3O60609 THOC2-220ENST00000618150 3211 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
GFRA3O60609 NSD3-206ENST00000527502 4471 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
GFRA3O60609 ZCCHC10-201ENST00000324170 2178 ntAPPRIS P3 TSL 1 (best) BASIC5.39□□□□□ -1.55
GFRA3O60609 BX322639.1-201ENST00000609841 6590 ntTSL 4 BASIC5.39□□□□□ -1.55
GFRA3O60609 CD47-201ENST00000355354 5020 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
GFRA3O60609 EIF5AL1-201ENST00000520547 3840 ntAPPRIS P1 BASIC5.39□□□□□ -1.55
GFRA3O60609 BDNF-217ENST00000533131 3878 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
GFRA3O60609 MYO3B-202ENST00000408978 5529 ntAPPRIS P3 TSL 1 (best) BASIC5.39□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 99.6 ms