Protein–RNA interactions for Protein: O43353

RIPK2, Receptor-interacting serine/threonine-protein kinase 2, humanhuman

Predictions only

Length 540 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIPK2O43353 TRAPPC13-204ENST00000438419 1437 ntAPPRIS P4 TSL 1 (best) BASIC2.67□□□□□ -1.98
RIPK2O43353 AC093536.2-201ENST00000565257 1406 ntBASIC2.67□□□□□ -1.98
RIPK2O43353 AC011477.1-204ENST00000623416 1325 ntBASIC2.67□□□□□ -1.98
RIPK2O43353 ZNF567-201ENST00000360729 2691 ntTSL 1 (best) BASIC2.66□□□□□ -1.98
RIPK2O43353 CCDC66-201ENST00000326595 3027 ntAPPRIS P3 TSL 1 (best) BASIC2.66□□□□□ -1.98
RIPK2O43353 RNU6-884P-201ENST00000363889 107 ntBASIC2.66□□□□□ -1.98
RIPK2O43353 RNU6-114P-201ENST00000384704 105 ntBASIC2.66□□□□□ -1.98
RIPK2O43353 ANAPC10P1-201ENST00000395991 556 ntBASIC2.66□□□□□ -1.98
RIPK2O43353 AL138827.1-201ENST00000402666 306 ntBASIC2.66□□□□□ -1.98
RIPK2O43353 RNU4ATAC16P-201ENST00000408512 126 ntBASIC2.66□□□□□ -1.98
RIPK2O43353 AC023141.4-201ENST00000412031 328 ntBASIC2.66□□□□□ -1.98
RIPK2O43353 GPC5-IT1-201ENST00000416664 658 ntTSL 3 BASIC2.66□□□□□ -1.98
RIPK2O43353 ZYG11AP1-201ENST00000430329 837 ntBASIC2.66□□□□□ -1.98
RIPK2O43353 AL139132.1-201ENST00000431587 344 ntBASIC2.66□□□□□ -1.98
RIPK2O43353 AC084290.1-201ENST00000434995 374 ntBASIC2.66□□□□□ -1.98
RIPK2O43353 LINC00353-201ENST00000435401 685 ntTSL 5 BASIC2.66□□□□□ -1.98
RIPK2O43353 DMD-AS3-201ENST00000439592 293 ntTSL 3 BASIC2.66□□□□□ -1.98
RIPK2O43353 RPS12P2-201ENST00000439728 269 ntBASIC2.66□□□□□ -1.98
RIPK2O43353 AL356475.1-201ENST00000440321 341 ntTSL 5 BASIC2.66□□□□□ -1.98
RIPK2O43353 AC011816.1-201ENST00000441346 546 ntBASIC2.66□□□□□ -1.98
RIPK2O43353 AL671855.1-201ENST00000446875 1203 ntBASIC2.66□□□□□ -1.98
RIPK2O43353 VN1R34P-201ENST00000447387 883 ntBASIC2.66□□□□□ -1.98
RIPK2O43353 AC009961.3-201ENST00000449832 765 ntBASIC2.66□□□□□ -1.98
RIPK2O43353 AL157400.4-201ENST00000455699 667 ntTSL 1 (best) BASIC2.66□□□□□ -1.98
RIPK2O43353 AL133351.1-201ENST00000456189 417 ntTSL 2 BASIC2.66□□□□□ -1.98
RIPK2O43353 MIR1302-2HG-201ENST00000469289 535 ntTSL 5 BASIC2.66□□□□□ -1.98
RIPK2O43353 AP000852.1-201ENST00000472460 573 ntBASIC2.66□□□□□ -1.98
RIPK2O43353 AC090096.1-201ENST00000489168 390 ntBASIC2.66□□□□□ -1.98
RIPK2O43353 SLC25A15P5-201ENST00000508033 253 ntBASIC2.66□□□□□ -1.98
RIPK2O43353 VCAN-AS1-202ENST00000513899 453 ntTSL 3 BASIC2.66□□□□□ -1.98
RIPK2O43353 SCARNA17.1-201ENST00000516211 143 ntBASIC2.66□□□□□ -1.98
RIPK2O43353 RNU6-311P-201ENST00000516224 102 ntBASIC2.66□□□□□ -1.98
RIPK2O43353 SCARNA17.2-201ENST00000516334 143 ntBASIC2.66□□□□□ -1.98
RIPK2O43353 ZFAND1-217ENST00000521895 885 ntTSL 3 BASIC2.66□□□□□ -1.98
RIPK2O43353 AC078962.4-201ENST00000546135 254 ntTSL 3 BASIC2.66□□□□□ -1.98
RIPK2O43353 LINC02294-201ENST00000549330 497 ntTSL 2 BASIC2.66□□□□□ -1.98
RIPK2O43353 AL359212.1-201ENST00000556608 614 ntBASIC2.66□□□□□ -1.98
RIPK2O43353 AC074050.1-201ENST00000563247 211 ntBASIC2.66□□□□□ -1.98
RIPK2O43353 MIR5092-201ENST00000583139 88 ntBASIC2.66□□□□□ -1.98
RIPK2O43353 AC096708.3-201ENST00000584226 559 ntTSL 2 BASIC2.66□□□□□ -1.98
RIPK2O43353 TPMTP1-201ENST00000592307 737 ntBASIC2.66□□□□□ -1.98
RIPK2O43353 AC021749.1-201ENST00000604322 607 ntBASIC2.66□□□□□ -1.98
RIPK2O43353 MTND4LP5-201ENST00000605152 292 ntBASIC2.66□□□□□ -1.98
RIPK2O43353 AC013562.2-201ENST00000611632 603 ntBASIC2.66□□□□□ -1.98
RIPK2O43353 SCARNA17.4-201ENST00000614296 143 ntBASIC2.66□□□□□ -1.98
RIPK2O43353 AL162274.2-201ENST00000614406 332 ntBASIC2.66□□□□□ -1.98
RIPK2O43353 SDR42E1P2-201ENST00000614861 481 ntBASIC2.66□□□□□ -1.98
RIPK2O43353 AC068787.1-201ENST00000623908 691 ntBASIC2.66□□□□□ -1.98
RIPK2O43353 AC079228.1-201ENST00000624774 1049 ntBASIC2.66□□□□□ -1.98
RIPK2O43353 SATB1-AS1-227ENST00000625533 743 ntTSL 5 BASIC2.66□□□□□ -1.98
RIPK2O43353 COMMD6-213ENST00000626103 120 ntTSL 5 BASIC2.66□□□□□ -1.98
RIPK2O43353 AKAP9-202ENST00000358100 10309 ntTSL 1 (best) BASIC2.66□□□□□ -1.98
RIPK2O43353 DDX43P2-201ENST00000604753 1354 ntBASIC2.65□□□□□ -1.98
RIPK2O43353 LIPI-203ENST00000536861 1529 ntAPPRIS ALT2 TSL 1 (best) BASIC2.65□□□□□ -1.99
RIPK2O43353 MIR422A-201ENST00000362286 90 ntBASIC2.65□□□□□ -1.99
RIPK2O43353 Y_RNA.192-201ENST00000363977 102 ntBASIC2.65□□□□□ -1.99
RIPK2O43353 RNU6-560P-201ENST00000364007 108 ntBASIC2.65□□□□□ -1.99
RIPK2O43353 RNU1-112P-201ENST00000364401 164 ntBASIC2.65□□□□□ -1.99
RIPK2O43353 RNU1-39P-201ENST00000383897 165 ntBASIC2.65□□□□□ -1.99
RIPK2O43353 SNORA18.3-201ENST00000384122 132 ntBASIC2.65□□□□□ -1.99
RIPK2O43353 U3.26-201ENST00000391236 204 ntBASIC2.65□□□□□ -1.99
RIPK2O43353 AL139095.1-201ENST00000404326 391 ntBASIC2.65□□□□□ -1.99
RIPK2O43353 C1D-204ENST00000410067 736 ntAPPRIS P1 TSL 1 (best) BASIC2.65□□□□□ -1.99
RIPK2O43353 AL592148.1-201ENST00000413568 445 ntBASIC2.65□□□□□ -1.99
RIPK2O43353 AL360169.1-201ENST00000435116 143 ntTSL 5 BASIC2.65□□□□□ -1.99
RIPK2O43353 CR769776.1-201ENST00000441254 787 ntBASIC2.65□□□□□ -1.99
RIPK2O43353 AL513412.1-201ENST00000445708 553 ntTSL 4 BASIC2.65□□□□□ -1.99
RIPK2O43353 PTENP1-201ENST00000447117 1215 ntBASIC2.65□□□□□ -1.99
RIPK2O43353 RPL12P25-201ENST00000455592 494 ntBASIC2.65□□□□□ -1.99
RIPK2O43353 AL356270.1-201ENST00000456587 522 ntTSL 3 BASIC2.65□□□□□ -1.99
RIPK2O43353 USP9YP25-201ENST00000457708 443 ntBASIC2.65□□□□□ -1.99
RIPK2O43353 RNU7-26P-201ENST00000458980 63 ntBASIC2.65□□□□□ -1.99
RIPK2O43353 RPL37P25-201ENST00000507308 276 ntBASIC2.65□□□□□ -1.99
RIPK2O43353 AL159163.1-201ENST00000507747 600 ntAPPRIS P1 TSL 5 BASIC2.65□□□□□ -1.99
RIPK2O43353 AC018752.1-201ENST00000507813 206 ntTSL 5 BASIC2.65□□□□□ -1.99
RIPK2O43353 RNA5SP282-201ENST00000516355 108 ntBASIC2.65□□□□□ -1.99
RIPK2O43353 SNORA67.7-201ENST00000516664 135 ntBASIC2.65□□□□□ -1.99
RIPK2O43353 AP001318.2-201ENST00000533378 492 ntTSL 3 BASIC2.65□□□□□ -1.99
RIPK2O43353 OR5V1-216ENST00000543825 1048 ntAPPRIS P1 BASIC2.65□□□□□ -1.99
RIPK2O43353 AC008114.1-201ENST00000544122 427 ntTSL 2 BASIC2.65□□□□□ -1.99
RIPK2O43353 TCF4-AS2-201ENST00000586467 445 ntTSL 2 BASIC2.65□□□□□ -1.99
RIPK2O43353 AC012493.2-201ENST00000595083 291 ntBASIC2.65□□□□□ -1.99
RIPK2O43353 AC008739.3-201ENST00000603262 127 ntBASIC2.65□□□□□ -1.99
RIPK2O43353 AL357094.1-201ENST00000603845 844 ntBASIC2.65□□□□□ -1.99
RIPK2O43353 AL355816.2-201ENST00000610049 647 ntBASIC2.65□□□□□ -1.99
RIPK2O43353 AC092106.3-201ENST00000611308 722 ntBASIC2.65□□□□□ -1.99
RIPK2O43353 AC068506.1-202ENST00000613388 545 ntTSL 3 BASIC2.65□□□□□ -1.99
RIPK2O43353 TUG1_2.1-201ENST00000614234 87 ntBASIC2.65□□□□□ -1.99
RIPK2O43353 ATP5A1P2-202ENST00000616464 443 ntBASIC2.65□□□□□ -1.99
RIPK2O43353 AC006133.1-201ENST00000617106 264 ntBASIC2.65□□□□□ -1.99
RIPK2O43353 AC013470.4-201ENST00000619978 986 ntBASIC2.65□□□□□ -1.99
RIPK2O43353 PTP4A2-219ENST00000626355 606 ntTSL 5 BASIC2.65□□□□□ -1.99
RIPK2O43353 WARS-244ENST00000627608 123 ntTSL 5 BASIC2.65□□□□□ -1.99
RIPK2O43353 HMHB1-202ENST00000638299 126 ntAPPRIS P2 TSL 1 (best) BASIC2.65□□□□□ -1.99
RIPK2O43353 TIGD2-201ENST00000317005 2083 ntAPPRIS P1 BASIC2.65□□□□□ -1.99
RIPK2O43353 MTND4P27-201ENST00000450813 1354 ntBASIC2.64□□□□□ -1.99
RIPK2O43353 PCF11-AS1-201ENST00000602322 1516 ntBASIC2.64□□□□□ -1.99
RIPK2O43353 SNORA38-201ENST00000363946 132 ntBASIC2.64□□□□□ -1.99
RIPK2O43353 SNORA67.1-201ENST00000364749 141 ntBASIC2.64□□□□□ -1.99
RIPK2O43353 RNU6-1083P-201ENST00000384022 107 ntBASIC2.64□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 113.6 ms