Protein–RNA interactions for Protein: O14627

CDX4, Homeobox protein CDX-4, humanhuman

Predicted RBP Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDX4O14627 AL590099.1-201ENST00000615276 138 ntBASIC2.75□□□□□ -1.97
CDX4O14627 AL591441.2-201ENST00000620059 535 ntTSL 5 BASIC2.75□□□□□ -1.97
CDX4O14627 C3orf85-208ENST00000622536 925 ntAPPRIS P5 TSL 5 BASIC2.75□□□□□ -1.97
CDX4O14627 AL356266.1-201ENST00000623311 483 ntBASIC2.75□□□□□ -1.97
CDX4O14627 AC099063.3-201ENST00000642066 185 ntBASIC2.75□□□□□ -1.97
CDX4O14627 NT5C3A-202ENST00000381626 1909 ntAPPRIS ALT1 TSL 5 BASIC2.75□□□□□ -1.97
CDX4O14627 AC093274.1-201ENST00000503488 5454 ntTSL 5 BASIC2.75□□□□□ -1.97
CDX4O14627 FASTKD1-205ENST00000453929 2791 ntTSL 2 BASIC2.75□□□□□ -1.97
CDX4O14627 RMDN2-205ENST00000407257 2280 ntTSL 5 BASIC2.75□□□□□ -1.97
CDX4O14627 TFEC-203ENST00000393485 2704 ntTSL 2 BASIC2.74□□□□□ -1.97
CDX4O14627 RNF128-202ENST00000324342 2654 ntTSL 1 (best) BASIC2.74□□□□□ -1.97
CDX4O14627 FRS2-201ENST00000397997 6550 ntAPPRIS P1 TSL 5 BASIC2.74□□□□□ -1.97
CDX4O14627 PMCH-201ENST00000329406 766 ntAPPRIS P1 TSL 1 (best) BASIC2.74□□□□□ -1.97
CDX4O14627 OSTN-201ENST00000339051 402 ntAPPRIS P1 TSL 1 (best) BASIC2.74□□□□□ -1.97
CDX4O14627 U8.2-201ENST00000363156 134 ntBASIC2.74□□□□□ -1.97
CDX4O14627 U3.4-201ENST00000363352 213 ntBASIC2.74□□□□□ -1.97
CDX4O14627 RNU4-75P-201ENST00000364621 146 ntBASIC2.74□□□□□ -1.97
CDX4O14627 Y_RNA.302-201ENST00000364997 102 ntBASIC2.74□□□□□ -1.97
CDX4O14627 CRLS1-202ENST00000378868 994 ntTSL 5 BASIC2.74□□□□□ -1.97
CDX4O14627 TRAJ32-201ENST00000390505 66 ntAPPRIS P1 BASIC2.74□□□□□ -1.97
CDX4O14627 ZNF705D-201ENST00000400078 925 ntAPPRIS P1 TSL 2 BASIC2.74□□□□□ -1.97
CDX4O14627 SNORA3.2-201ENST00000408221 125 ntBASIC2.74□□□□□ -1.97
CDX4O14627 MIR1305-201ENST00000408300 86 ntBASIC2.74□□□□□ -1.97
CDX4O14627 RNA5SP21-201ENST00000410917 96 ntBASIC2.74□□□□□ -1.97
CDX4O14627 MTCO1P17-201ENST00000411522 491 ntBASIC2.74□□□□□ -1.97
CDX4O14627 AC109780.2-201ENST00000413467 845 ntBASIC2.74□□□□□ -1.97
CDX4O14627 AL513477.1-202ENST00000417061 214 ntBASIC2.74□□□□□ -1.97
CDX4O14627 AL358234.1-201ENST00000421132 273 ntTSL 5 BASIC2.74□□□□□ -1.97
CDX4O14627 TRAPPC2P4-201ENST00000421750 331 ntBASIC2.74□□□□□ -1.97
CDX4O14627 AC107081.2-201ENST00000425779 802 ntTSL 5 BASIC2.74□□□□□ -1.97
CDX4O14627 TOMM20P4-201ENST00000427861 435 ntBASIC2.74□□□□□ -1.97
CDX4O14627 MTCO3P5-201ENST00000433620 714 ntBASIC2.74□□□□□ -1.97
CDX4O14627 ZNF385D-AS2-201ENST00000436306 424 ntTSL 5 BASIC2.74□□□□□ -1.97
CDX4O14627 HMGN2P20-201ENST00000437531 273 ntBASIC2.74□□□□□ -1.97
CDX4O14627 AC004866.2-201ENST00000438285 481 ntBASIC2.74□□□□□ -1.97
CDX4O14627 HIGD1AP11-201ENST00000438361 280 ntBASIC2.74□□□□□ -1.97
CDX4O14627 MTND1P30-201ENST00000441241 901 ntBASIC2.74□□□□□ -1.97
CDX4O14627 LINC00529-201ENST00000443854 241 ntTSL 2 BASIC2.74□□□□□ -1.97
CDX4O14627 RPL36AP33-201ENST00000450395 310 ntBASIC2.74□□□□□ -1.97
CDX4O14627 RPL23AP31-201ENST00000456160 467 ntBASIC2.74□□□□□ -1.97
CDX4O14627 RPL30P9-201ENST00000465586 330 ntBASIC2.74□□□□□ -1.97
CDX4O14627 AC022447.3-201ENST00000506865 495 ntBASIC2.74□□□□□ -1.97
CDX4O14627 AC063919.1-201ENST00000514281 254 ntTSL 3 BASIC2.74□□□□□ -1.97
CDX4O14627 LINC02484-202ENST00000514877 546 ntTSL 3 BASIC2.74□□□□□ -1.97
CDX4O14627 Y_RNA.695-201ENST00000516715 107 ntBASIC2.74□□□□□ -1.97
CDX4O14627 AC093331.1-201ENST00000521474 169 ntBASIC2.74□□□□□ -1.97
CDX4O14627 AP001205.1-201ENST00000521625 449 ntTSL 3 BASIC2.74□□□□□ -1.97
CDX4O14627 AC103798.1-201ENST00000532562 376 ntTSL 2 BASIC2.74□□□□□ -1.97
CDX4O14627 KLRF2-201ENST00000535540 731 ntAPPRIS P1 TSL 1 (best) BASIC2.74□□□□□ -1.97
CDX4O14627 AC084819.1-201ENST00000537293 424 ntTSL 1 (best) BASIC2.74□□□□□ -1.97
CDX4O14627 AC092745.2-201ENST00000537764 620 ntTSL 3 BASIC2.74□□□□□ -1.97
CDX4O14627 AC069228.1-202ENST00000550272 737 ntTSL 3 BASIC2.74□□□□□ -1.97
CDX4O14627 AC090049.1-201ENST00000551075 1011 ntTSL 3 BASIC2.74□□□□□ -1.97
CDX4O14627 LINC02461-201ENST00000553211 836 ntTSL 3 BASIC2.74□□□□□ -1.97
CDX4O14627 SETP2-201ENST00000553886 926 ntBASIC2.74□□□□□ -1.97
CDX4O14627 AL135746.1-201ENST00000554205 547 ntTSL 3 BASIC2.74□□□□□ -1.97
CDX4O14627 AL163153.1-201ENST00000554223 283 ntBASIC2.74□□□□□ -1.97
CDX4O14627 AL157955.1-201ENST00000554433 331 ntTSL 3 BASIC2.74□□□□□ -1.97
CDX4O14627 TIMM9-207ENST00000555930 448 ntTSL 3 BASIC2.74□□□□□ -1.97
CDX4O14627 AL845331.3-202ENST00000562856 261 ntBASIC2.74□□□□□ -1.97
CDX4O14627 FAM60BP-201ENST00000578364 658 ntBASIC2.74□□□□□ -1.97
CDX4O14627 MIR4474-201ENST00000579189 78 ntBASIC2.74□□□□□ -1.97
CDX4O14627 AC091691.2-201ENST00000581940 567 ntTSL 4 BASIC2.74□□□□□ -1.97
CDX4O14627 AP001029.3-201ENST00000588063 596 ntBASIC2.74□□□□□ -1.97
CDX4O14627 RSL24D1P11-201ENST00000591045 491 ntBASIC2.74□□□□□ -1.97
CDX4O14627 AC090227.2-201ENST00000591105 340 ntTSL 5 BASIC2.74□□□□□ -1.97
CDX4O14627 AC073544.2-201ENST00000601155 540 ntBASIC2.74□□□□□ -1.97
CDX4O14627 AL031775.1-201ENST00000607014 887 ntBASIC2.74□□□□□ -1.97
CDX4O14627 AL355810.1-201ENST00000614629 552 ntBASIC2.74□□□□□ -1.97
CDX4O14627 AC002550.2-201ENST00000621246 394 ntBASIC2.74□□□□□ -1.97
CDX4O14627 AL356596.1-201ENST00000624230 379 ntBASIC2.74□□□□□ -1.97
CDX4O14627 AC092608.2-201ENST00000624427 218 ntBASIC2.74□□□□□ -1.97
CDX4O14627 MUC15-201ENST00000281268 2968 ntTSL 5 BASIC2.74□□□□□ -1.97
CDX4O14627 AC092104.1-201ENST00000497346 1441 ntBASIC2.74□□□□□ -1.97
CDX4O14627 POLK-217ENST00000515295 1438 ntTSL 1 (best) BASIC2.74□□□□□ -1.97
CDX4O14627 SLAIN1-203ENST00000351546 2394 ntTSL 2 BASIC2.74□□□□□ -1.97
CDX4O14627 ROCK1P1-203ENST00000608049 2457 ntTSL 1 (best) BASIC2.74□□□□□ -1.97
CDX4O14627 C1orf141-202ENST00000371006 2053 ntAPPRIS P3 TSL 2 BASIC2.73□□□□□ -1.97
CDX4O14627 SAGE1-201ENST00000324447 2952 ntAPPRIS P2 TSL 5 BASIC2.73□□□□□ -1.97
CDX4O14627 DMD-203ENST00000357033 13956 ntAPPRIS P3 TSL 1 (best) BASIC2.73□□□□□ -1.97
CDX4O14627 THUMPD3P1-201ENST00000506556 1480 ntBASIC2.73□□□□□ -1.97
CDX4O14627 RPL7P26-201ENST00000333817 754 ntBASIC2.73□□□□□ -1.97
CDX4O14627 OR2M2-201ENST00000359682 1044 ntAPPRIS P1 BASIC2.73□□□□□ -1.97
CDX4O14627 RNU6-623P-201ENST00000363143 105 ntBASIC2.73□□□□□ -1.97
CDX4O14627 RNU6-433P-201ENST00000363216 104 ntBASIC2.73□□□□□ -1.97
CDX4O14627 Y_RNA.194-201ENST00000363985 102 ntBASIC2.73□□□□□ -1.97
CDX4O14627 RNU6-343P-201ENST00000364709 104 ntBASIC2.73□□□□□ -1.97
CDX4O14627 RNU6-1207P-201ENST00000384343 107 ntBASIC2.73□□□□□ -1.97
CDX4O14627 AL591034.1-201ENST00000407447 340 ntBASIC2.73□□□□□ -1.97
CDX4O14627 PPP1R1C-203ENST00000409702 1157 ntAPPRIS P1 TSL 1 (best) BASIC2.73□□□□□ -1.97
CDX4O14627 RNU2-43P-201ENST00000410306 190 ntBASIC2.73□□□□□ -1.97
CDX4O14627 RNU6-55P-201ENST00000411092 107 ntBASIC2.73□□□□□ -1.97
CDX4O14627 RNU6-954P-201ENST00000411355 107 ntBASIC2.73□□□□□ -1.97
CDX4O14627 AC006150.1-201ENST00000412014 263 ntTSL 5 BASIC2.73□□□□□ -1.97
CDX4O14627 AC093157.2-201ENST00000414686 671 ntTSL 5 BASIC2.73□□□□□ -1.97
CDX4O14627 RPL23AP39-201ENST00000415533 405 ntBASIC2.73□□□□□ -1.97
CDX4O14627 AL137856.1-202ENST00000418238 422 ntTSL 3 BASIC2.73□□□□□ -1.97
CDX4O14627 LINC00189-202ENST00000431661 308 ntTSL 5 BASIC2.73□□□□□ -1.97
CDX4O14627 AL359081.1-201ENST00000432083 615 ntTSL 2 BASIC2.73□□□□□ -1.97
CDX4O14627 AL353706.1-201ENST00000436728 494 ntBASIC2.73□□□□□ -1.97
Retrieved 100 of 98,524 protein–RNA pairs in 85.8 ms