Protein–RNA interactions for Protein: O14562

UBFD1, Ubiquitin domain-containing protein UBFD1, humanhuman

Known RBP Predictions only

Length 309 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBFD1O14562 AC016229.1-201ENST00000589242 487 ntTSL 5 BASIC1.88□□□□□ -2.11
UBFD1O14562 STARD13-AS-208ENST00000589472 859 ntTSL 5 BASIC1.88□□□□□ -2.11
UBFD1O14562 AL161629.2-201ENST00000615347 275 ntBASIC1.88□□□□□ -2.11
UBFD1O14562 AL031601.2-202ENST00000622650 282 ntBASIC1.88□□□□□ -2.11
UBFD1O14562 AC068631.1-219ENST00000625826 668 ntTSL 5 BASIC1.88□□□□□ -2.11
UBFD1O14562 MIR219B-201ENST00000637023 88 ntBASIC1.88□□□□□ -2.11
UBFD1O14562 AC099063.3-201ENST00000642066 185 ntBASIC1.88□□□□□ -2.11
UBFD1O14562 SNX10-209ENST00000619420 2361 ntAPPRIS ALT1 TSL 5 BASIC1.88□□□□□ -2.11
UBFD1O14562 OR4G11P-202ENST00000642116 1414 ntBASIC1.88□□□□□ -2.11
UBFD1O14562 PLSCR5-201ENST00000443512 1969 ntAPPRIS P1 TSL 1 (best) BASIC1.88□□□□□ -2.11
UBFD1O14562 PCDH11Y-203ENST00000362095 4220 ntAPPRIS ALT2 TSL 1 (best) BASIC1.88□□□□□ -2.11
UBFD1O14562 OR4G2P-202ENST00000641004 1759 ntBASIC1.87□□□□□ -2.11
UBFD1O14562 LINC01592-202ENST00000518540 2367 ntTSL 2 BASIC1.87□□□□□ -2.11
UBFD1O14562 RNF128-202ENST00000324342 2654 ntTSL 1 (best) BASIC1.87□□□□□ -2.11
UBFD1O14562 ATP13A3-201ENST00000256031 7322 ntAPPRIS P1 TSL 5 BASIC1.87□□□□□ -2.11
UBFD1O14562 TECRL-202ENST00000507440 2876 ntTSL 5 BASIC1.87□□□□□ -2.11
UBFD1O14562 RNU6-1159P-201ENST00000362933 107 ntBASIC1.87□□□□□ -2.11
UBFD1O14562 RNU6-492P-201ENST00000363035 104 ntBASIC1.87□□□□□ -2.11
UBFD1O14562 RNU6-878P-201ENST00000384578 110 ntBASIC1.87□□□□□ -2.11
UBFD1O14562 RNU6-1072P-201ENST00000384703 107 ntBASIC1.87□□□□□ -2.11
UBFD1O14562 RNU6-443P-201ENST00000384780 107 ntBASIC1.87□□□□□ -2.11
UBFD1O14562 CASP3-203ENST00000393588 677 ntTSL 4 BASIC1.87□□□□□ -2.11
UBFD1O14562 GSTA9P-201ENST00000406231 611 ntBASIC1.87□□□□□ -2.11
UBFD1O14562 RNU6ATAC15P-201ENST00000408279 121 ntBASIC1.87□□□□□ -2.11
UBFD1O14562 MTCO2P1-201ENST00000424648 477 ntBASIC1.87□□□□□ -2.11
UBFD1O14562 AC107081.2-201ENST00000425779 802 ntTSL 5 BASIC1.87□□□□□ -2.11
UBFD1O14562 BLOC1S2P1-201ENST00000428431 301 ntBASIC1.87□□□□□ -2.11
UBFD1O14562 AC002386.1-201ENST00000436714 398 ntTSL 2 BASIC1.87□□□□□ -2.11
UBFD1O14562 KTN1-207ENST00000438792 4449 ntAPPRIS ALT2 TSL 5 BASIC1.87□□□□□ -2.11
UBFD1O14562 AC005297.2-201ENST00000450430 606 ntBASIC1.87□□□□□ -2.11
UBFD1O14562 AL353691.1-201ENST00000451332 387 ntBASIC1.87□□□□□ -2.11
UBFD1O14562 USP9YP34-201ENST00000453983 808 ntBASIC1.87□□□□□ -2.11
UBFD1O14562 AL139109.1-201ENST00000455491 297 ntBASIC1.87□□□□□ -2.11
UBFD1O14562 KPNA2P1-201ENST00000458289 1591 ntBASIC1.87□□□□□ -2.11
UBFD1O14562 RPL32P14-201ENST00000463196 378 ntBASIC1.87□□□□□ -2.11
UBFD1O14562 AL049714.1-201ENST00000466686 347 ntBASIC1.87□□□□□ -2.11
UBFD1O14562 AC092757.1-201ENST00000467293 467 ntBASIC1.87□□□□□ -2.11
UBFD1O14562 AL135752.1-201ENST00000479477 471 ntBASIC1.87□□□□□ -2.11
UBFD1O14562 RPS27P26-201ENST00000494583 239 ntBASIC1.87□□□□□ -2.11
UBFD1O14562 MGAT4A-209ENST00000495056 683 ntTSL 2 BASIC1.87□□□□□ -2.11
UBFD1O14562 AC106872.3-201ENST00000495104 446 ntBASIC1.87□□□□□ -2.11
UBFD1O14562 AP003730.2-201ENST00000526385 546 ntTSL 3 BASIC1.87□□□□□ -2.11
UBFD1O14562 AC015771.1-201ENST00000527283 554 ntTSL 4 BASIC1.87□□□□□ -2.11
UBFD1O14562 LINC02448-201ENST00000548613 583 ntTSL 2 BASIC1.87□□□□□ -2.11
UBFD1O14562 LINC02329-201ENST00000554753 511 ntTSL 5 BASIC1.87□□□□□ -2.11
UBFD1O14562 TIMM9-203ENST00000555061 598 ntAPPRIS P1 TSL 1 (best) BASIC1.87□□□□□ -2.11
UBFD1O14562 AC135628.1-201ENST00000568867 534 ntBASIC1.87□□□□□ -2.11
UBFD1O14562 AC068135.2-201ENST00000569293 1028 ntBASIC1.87□□□□□ -2.11
UBFD1O14562 ANKRD36BP2-206ENST00000575193 1245 ntBASIC1.87□□□□□ -2.11
UBFD1O14562 MIR4666A-201ENST00000580160 79 ntBASIC1.87□□□□□ -2.11
UBFD1O14562 AC009977.1-201ENST00000586015 570 ntBASIC1.87□□□□□ -2.11
UBFD1O14562 AC105224.1-201ENST00000587055 421 ntBASIC1.87□□□□□ -2.11
UBFD1O14562 AC090330.1-201ENST00000588646 764 ntBASIC1.87□□□□□ -2.11
UBFD1O14562 CERS6-AS1-202ENST00000594898 499 ntTSL 5 BASIC1.87□□□□□ -2.11
UBFD1O14562 AP003973.1-201ENST00000604639 691 ntBASIC1.87□□□□□ -2.11
UBFD1O14562 CERS6-AS1-209ENST00000609766 642 ntTSL 5 BASIC1.87□□□□□ -2.11
UBFD1O14562 ANKRD36C-207ENST00000612359 650 ntTSL 1 (best) BASIC1.87□□□□□ -2.11
UBFD1O14562 AL590099.1-201ENST00000615276 138 ntBASIC1.87□□□□□ -2.11
UBFD1O14562 AC090132.2-201ENST00000615881 347 ntBASIC1.87□□□□□ -2.11
UBFD1O14562 AC008568.2-201ENST00000623862 2313 ntBASIC1.87□□□□□ -2.11
UBFD1O14562 U6.101-201ENST00000637707 76 ntBASIC1.87□□□□□ -2.11
UBFD1O14562 OR5H6-203ENST00000642105 978 ntBASIC1.87□□□□□ -2.11
UBFD1O14562 SYT14-201ENST00000367015 5094 ntAPPRIS ALT2 TSL 1 (best) BASIC1.87□□□□□ -2.11
UBFD1O14562 AC008163.1-205ENST00000413944 4649 ntTSL 1 (best) BASIC1.87□□□□□ -2.11
UBFD1O14562 AC087359.1-201ENST00000508335 1740 ntBASIC1.86□□□□□ -2.11
UBFD1O14562 AL359851.1-201ENST00000569460 4997 ntBASIC1.86□□□□□ -2.11
UBFD1O14562 LINC00305-201ENST00000323355 873 ntTSL 1 (best) BASIC1.86□□□□□ -2.11
UBFD1O14562 ZBTB8OSP1-201ENST00000342688 498 ntBASIC1.86□□□□□ -2.11
UBFD1O14562 DEFB108F-201ENST00000344638 222 ntBASIC1.86□□□□□ -2.11
UBFD1O14562 RNU6-549P-201ENST00000384433 107 ntBASIC1.86□□□□□ -2.11
UBFD1O14562 MIR325-201ENST00000385260 98 ntBASIC1.86□□□□□ -2.11
UBFD1O14562 RNU4ATAC16P-201ENST00000408512 126 ntBASIC1.86□□□□□ -2.11
UBFD1O14562 RNU2-40P-201ENST00000410833 196 ntBASIC1.86□□□□□ -2.11
UBFD1O14562 AL365356.1-201ENST00000411512 736 ntTSL 3 BASIC1.86□□□□□ -2.11
UBFD1O14562 LUZP4P1-201ENST00000415420 344 ntBASIC1.86□□□□□ -2.11
UBFD1O14562 AC003092.1-201ENST00000415536 639 ntTSL 3 BASIC1.86□□□□□ -2.11
UBFD1O14562 RPL27AP8-201ENST00000424277 446 ntBASIC1.86□□□□□ -2.11
UBFD1O14562 AC007742.1-201ENST00000425789 329 ntBASIC1.86□□□□□ -2.11
UBFD1O14562 AC007566.1-201ENST00000427458 643 ntTSL 5 BASIC1.86□□□□□ -2.11
UBFD1O14562 PCYT1B-AS1-201ENST00000432626 275 ntTSL 2 BASIC1.86□□□□□ -2.11
UBFD1O14562 LANCL1-AS1-203ENST00000433296 864 ntTSL 2 BASIC1.86□□□□□ -2.11
UBFD1O14562 ELOCP26-201ENST00000436067 329 ntBASIC1.86□□□□□ -2.11
UBFD1O14562 AL714022.1-201ENST00000439897 151 ntBASIC1.86□□□□□ -2.11
UBFD1O14562 BTBD7P2-201ENST00000441962 620 ntBASIC1.86□□□□□ -2.11
UBFD1O14562 AC110995.1-201ENST00000444185 628 ntTSL 3 BASIC1.86□□□□□ -2.11
UBFD1O14562 AC026347.1-201ENST00000463255 474 ntTSL 3 BASIC1.86□□□□□ -2.11
UBFD1O14562 ANKRD7-204ENST00000477532 744 ntTSL 5 BASIC1.86□□□□□ -2.11
UBFD1O14562 AC116337.2-201ENST00000477662 156 ntBASIC1.86□□□□□ -2.11
UBFD1O14562 RN7SL274P-201ENST00000492268 272 ntBASIC1.86□□□□□ -2.11
UBFD1O14562 ANKRD36B-207ENST00000497329 649 ntTSL 1 (best) BASIC1.86□□□□□ -2.11
UBFD1O14562 KLRA1P-201ENST00000503499 986 ntBASIC1.86□□□□□ -2.11
UBFD1O14562 LINC02447-203ENST00000504402 292 ntTSL 3 BASIC1.86□□□□□ -2.11
UBFD1O14562 AC034226.1-201ENST00000506429 487 ntTSL 2 BASIC1.86□□□□□ -2.11
UBFD1O14562 RN7SKP219-201ENST00000516825 296 ntBASIC1.86□□□□□ -2.11
UBFD1O14562 COX6CP5-201ENST00000527162 228 ntBASIC1.86□□□□□ -2.11
UBFD1O14562 DEFB108D-201ENST00000527787 222 ntBASIC1.86□□□□□ -2.11
UBFD1O14562 FAM92A1P1-201ENST00000528023 890 ntBASIC1.86□□□□□ -2.11
UBFD1O14562 PDZD9-203ENST00000537222 1068 ntTSL 3 BASIC1.86□□□□□ -2.11
UBFD1O14562 OR11H5P-201ENST00000554039 926 ntBASIC1.86□□□□□ -2.11
UBFD1O14562 AL049775.2-201ENST00000557547 558 ntTSL 4 BASIC1.86□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 183.1 ms