Protein–RNA interactions for Protein: O00273

DFFA, DNA fragmentation factor subunit alpha, humanhuman

Predictions only

Length 331 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DFFAO00273 AC107222.1-201ENST00000510899 637 ntBASIC2.23□□□□□ -2.05
DFFAO00273 RNU6-1225P-201ENST00000516336 65 ntBASIC2.23□□□□□ -2.05
DFFAO00273 AL118556.1-201ENST00000555257 502 ntTSL 2 BASIC2.23□□□□□ -2.05
DFFAO00273 AC018904.1-201ENST00000560594 542 ntTSL 3 BASIC2.23□□□□□ -2.05
DFFAO00273 AC005498.1-201ENST00000592125 465 ntBASIC2.23□□□□□ -2.05
DFFAO00273 AC084824.5-201ENST00000612009 413 ntBASIC2.23□□□□□ -2.05
DFFAO00273 UBE2Q2P6-201ENST00000612666 153 ntBASIC2.23□□□□□ -2.05
DFFAO00273 MIR6895-201ENST00000613497 78 ntBASIC2.23□□□□□ -2.05
DFFAO00273 AC107308.1-201ENST00000615897 301 ntBASIC2.23□□□□□ -2.05
DFFAO00273 AC064859.1-201ENST00000624741 174 ntBASIC2.23□□□□□ -2.05
DFFAO00273 AL159972.1-201ENST00000625150 448 ntBASIC2.23□□□□□ -2.05
DFFAO00273 P2RY12-201ENST00000302632 1766 ntAPPRIS P1 TSL 1 (best) BASIC2.23□□□□□ -2.05
DFFAO00273 TSLP-202ENST00000379706 2411 ntTSL 1 (best) BASIC2.22□□□□□ -2.05
DFFAO00273 OR4M1-202ENST00000641200 3493 ntAPPRIS P1 BASIC2.22□□□□□ -2.05
DFFAO00273 CDK1-202ENST00000373809 1613 ntTSL 1 (best) BASIC2.22□□□□□ -2.05
DFFAO00273 RNU5E-8P-201ENST00000363502 116 ntBASIC2.22□□□□□ -2.05
DFFAO00273 SNORA68.1-201ENST00000364537 132 ntBASIC2.22□□□□□ -2.05
DFFAO00273 SNRPE-201ENST00000367208 355 ntTSL 2 BASIC2.22□□□□□ -2.05
DFFAO00273 RNU6-741P-201ENST00000383889 107 ntBASIC2.22□□□□□ -2.05
DFFAO00273 AL391863.2-201ENST00000411838 681 ntTSL 2 BASIC2.22□□□□□ -2.05
DFFAO00273 Z98742.3-201ENST00000418637 326 ntBASIC2.22□□□□□ -2.05
DFFAO00273 USP9YP21-201ENST00000420603 432 ntBASIC2.22□□□□□ -2.05
DFFAO00273 PTP4A1P7-201ENST00000423476 514 ntBASIC2.22□□□□□ -2.05
DFFAO00273 AC092047.1-201ENST00000424997 240 ntBASIC2.22□□□□□ -2.05
DFFAO00273 AC008850.1-201ENST00000427546 362 ntBASIC2.22□□□□□ -2.05
DFFAO00273 AL035407.1-201ENST00000429211 571 ntBASIC2.22□□□□□ -2.05
DFFAO00273 OR4K11P-201ENST00000431829 904 ntBASIC2.22□□□□□ -2.05
DFFAO00273 AC097347.1-201ENST00000438499 517 ntTSL 3 BASIC2.22□□□□□ -2.05
DFFAO00273 AP000146.1-202ENST00000441666 441 ntTSL 3 BASIC2.22□□□□□ -2.05
DFFAO00273 CBWD4P-201ENST00000445695 655 ntBASIC2.22□□□□□ -2.05
DFFAO00273 SATB1-AS1-204ENST00000453361 726 ntTSL 3 BASIC2.22□□□□□ -2.05
DFFAO00273 AL365273.2-201ENST00000491114 492 ntAPPRIS P1 TSL 5 BASIC2.22□□□□□ -2.05
DFFAO00273 CCNG1-203ENST00000504553 732 ntTSL 3 BASIC2.22□□□□□ -2.05
DFFAO00273 SUMO2P6-201ENST00000505273 288 ntBASIC2.22□□□□□ -2.05
DFFAO00273 VCAN-AS1-202ENST00000513899 453 ntTSL 3 BASIC2.22□□□□□ -2.05
DFFAO00273 AC106895.1-201ENST00000515825 548 ntTSL 4 BASIC2.22□□□□□ -2.05
DFFAO00273 RNA5SP200-201ENST00000516360 103 ntBASIC2.22□□□□□ -2.05
DFFAO00273 RNA5SP82-201ENST00000516707 92 ntBASIC2.22□□□□□ -2.05
DFFAO00273 SUB1P1-201ENST00000524415 382 ntBASIC2.22□□□□□ -2.05
DFFAO00273 LINC02460-201ENST00000543558 536 ntTSL 4 BASIC2.22□□□□□ -2.05
DFFAO00273 LINC02448-201ENST00000548613 583 ntTSL 2 BASIC2.22□□□□□ -2.05
DFFAO00273 AL391261.3-201ENST00000557194 520 ntBASIC2.22□□□□□ -2.05
DFFAO00273 TRAV28-201ENST00000557548 323 ntBASIC2.22□□□□□ -2.05
DFFAO00273 DISC1FP1-204ENST00000563681 466 ntTSL 3 BASIC2.22□□□□□ -2.05
DFFAO00273 AC010547.2-201ENST00000568523 409 ntTSL 5 BASIC2.22□□□□□ -2.05
DFFAO00273 MIR3912-201ENST00000577566 105 ntBASIC2.22□□□□□ -2.05
DFFAO00273 MIR4658-201ENST00000584344 65 ntBASIC2.22□□□□□ -2.05
DFFAO00273 AC008507.2-201ENST00000588402 1176 ntBASIC2.22□□□□□ -2.05
DFFAO00273 AL355877.2-201ENST00000603670 358 ntBASIC2.22□□□□□ -2.05
DFFAO00273 AP002802.2-201ENST00000605877 235 ntBASIC2.22□□□□□ -2.05
DFFAO00273 AC107294.1-201ENST00000609524 467 ntBASIC2.22□□□□□ -2.05
DFFAO00273 AL359962.2-201ENST00000610044 303 ntTSL 5 BASIC2.22□□□□□ -2.05
DFFAO00273 AC023158.2-201ENST00000614876 543 ntBASIC2.22□□□□□ -2.05
DFFAO00273 AL603758.1-201ENST00000618654 241 ntBASIC2.22□□□□□ -2.05
DFFAO00273 OR8K3-202ENST00000623845 939 ntAPPRIS P1 BASIC2.22□□□□□ -2.05
DFFAO00273 MIR4275-201ENST00000636486 87 ntBASIC2.22□□□□□ -2.05
DFFAO00273 AL022578.1-201ENST00000439330 1433 ntBASIC2.22□□□□□ -2.05
DFFAO00273 SNX16-212ENST00000615066 1918 ntTSL 5 BASIC2.22□□□□□ -2.05
DFFAO00273 EYS-202ENST00000342421 2168 ntTSL 1 (best) BASIC2.22□□□□□ -2.05
DFFAO00273 HTN1-201ENST00000246896 580 ntAPPRIS P1 TSL 1 (best) BASIC2.21□□□□□ -2.06
DFFAO00273 RNU6-217P-201ENST00000384164 104 ntBASIC2.21□□□□□ -2.06
DFFAO00273 SNORA3.2-201ENST00000408221 125 ntBASIC2.21□□□□□ -2.06
DFFAO00273 HMGB1P11-201ENST00000413899 637 ntBASIC2.21□□□□□ -2.06
DFFAO00273 TPMTP2-201ENST00000414372 726 ntBASIC2.21□□□□□ -2.06
DFFAO00273 AL158013.1-202ENST00000419666 520 ntTSL 5 BASIC2.21□□□□□ -2.06
DFFAO00273 AL356320.1-201ENST00000429616 163 ntBASIC2.21□□□□□ -2.06
DFFAO00273 PIGFP3-201ENST00000441918 722 ntBASIC2.21□□□□□ -2.06
DFFAO00273 SNORD121B-201ENST00000458838 81 ntBASIC2.21□□□□□ -2.06
DFFAO00273 snoU13.8-201ENST00000458890 104 ntBASIC2.21□□□□□ -2.06
DFFAO00273 AC138853.1-201ENST00000503549 823 ntBASIC2.21□□□□□ -2.06
DFFAO00273 ANXA2P1-201ENST00000505539 926 ntBASIC2.21□□□□□ -2.06
DFFAO00273 AC104803.1-201ENST00000506917 529 ntTSL 3 BASIC2.21□□□□□ -2.06
DFFAO00273 LINC02465-201ENST00000507099 532 ntTSL 4 BASIC2.21□□□□□ -2.06
DFFAO00273 LNX1-AS1-202ENST00000510785 550 ntTSL 2 BASIC2.21□□□□□ -2.06
DFFAO00273 AC104827.1-202ENST00000511917 1049 ntTSL 1 (best) BASIC2.21□□□□□ -2.06
DFFAO00273 AC008549.1-201ENST00000512900 643 ntBASIC2.21□□□□□ -2.06
DFFAO00273 RNU6-1028P-201ENST00000517164 93 ntBASIC2.21□□□□□ -2.06
DFFAO00273 LINC00824-201ENST00000517583 805 ntTSL 5 BASIC2.21□□□□□ -2.06
DFFAO00273 SNRPGP18-201ENST00000553000 214 ntBASIC2.21□□□□□ -2.06
DFFAO00273 AP000943.4-201ENST00000622912 357 ntBASIC2.21□□□□□ -2.06
DFFAO00273 AP003485.1-201ENST00000625093 753 ntBASIC2.21□□□□□ -2.06
DFFAO00273 CEP44-203ENST00000426172 3037 ntTSL 5 BASIC2.21□□□□□ -2.06
DFFAO00273 FAR1-204ENST00000532502 5820 ntTSL 2 BASIC2.2□□□□□ -2.06
DFFAO00273 PTPRQ-209ENST00000616559 8165 ntTSL 5 BASIC2.2□□□□□ -2.06
DFFAO00273 IVNS1ABP-201ENST00000367497 746 ntTSL 5 BASIC2.2□□□□□ -2.06
DFFAO00273 RNU6-1122P-201ENST00000384449 107 ntBASIC2.2□□□□□ -2.06
DFFAO00273 TRAJ32-201ENST00000390505 66 ntAPPRIS P1 BASIC2.2□□□□□ -2.06
DFFAO00273 RSL24D1P4-201ENST00000400938 484 ntBASIC2.2□□□□□ -2.06
DFFAO00273 RNU6ATAC16P-201ENST00000408591 138 ntBASIC2.2□□□□□ -2.06
DFFAO00273 PPP3R1-202ENST00000409377 684 ntTSL 3 BASIC2.2□□□□□ -2.06
DFFAO00273 AL135786.1-201ENST00000415892 214 ntBASIC2.2□□□□□ -2.06
DFFAO00273 MRPS36P1-201ENST00000421291 307 ntBASIC2.2□□□□□ -2.06
DFFAO00273 MTND4P6-201ENST00000438297 472 ntBASIC2.2□□□□□ -2.06
DFFAO00273 AL445687.1-201ENST00000439946 251 ntBASIC2.2□□□□□ -2.06
DFFAO00273 AL353705.4-201ENST00000449661 238 ntBASIC2.2□□□□□ -2.06
DFFAO00273 AP1S2P1-201ENST00000457344 379 ntBASIC2.2□□□□□ -2.06
DFFAO00273 AC107626.1-201ENST00000471084 183 ntBASIC2.2□□□□□ -2.06
DFFAO00273 AC004263.1-201ENST00000479327 332 ntBASIC2.2□□□□□ -2.06
DFFAO00273 AC090096.1-201ENST00000489168 390 ntBASIC2.2□□□□□ -2.06
DFFAO00273 LINC02032-201ENST00000490465 391 ntTSL 2 BASIC2.2□□□□□ -2.06
Retrieved 100 of 98,524 protein–RNA pairs in 89.2 ms