Protein–RNA interactions for Protein: H3BMG3

SMKR1, Small lysine-rich protein 1, humanhuman

Predictions only

Length 65 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMKR1H3BMG3 GABRG2-209ENST00000638660 3799 ntTSL 5 BASIC2.04□□□□□ -2.08
SMKR1H3BMG3 UBE2L2-201ENST00000254302 429 ntBASIC2.04□□□□□ -2.08
SMKR1H3BMG3 DEFB112-201ENST00000322246 342 ntAPPRIS P1 TSL 1 (best) BASIC2.04□□□□□ -2.08
SMKR1H3BMG3 RNU1-33P-201ENST00000364249 162 ntBASIC2.04□□□□□ -2.08
SMKR1H3BMG3 SNORA70.2-201ENST00000364506 135 ntBASIC2.04□□□□□ -2.08
SMKR1H3BMG3 LINC01545-201ENST00000377879 521 ntTSL 1 (best) BASIC2.04□□□□□ -2.08
SMKR1H3BMG3 RNU6-769P-201ENST00000384407 104 ntBASIC2.04□□□□□ -2.08
SMKR1H3BMG3 AC119751.3-201ENST00000399720 670 ntBASIC2.04□□□□□ -2.08
SMKR1H3BMG3 AL021407.1-201ENST00000404531 386 ntBASIC2.04□□□□□ -2.08
SMKR1H3BMG3 ANKRD18EP-201ENST00000405487 2632 ntBASIC2.04□□□□□ -2.08
SMKR1H3BMG3 AC007064.1-201ENST00000412238 351 ntBASIC2.04□□□□□ -2.08
SMKR1H3BMG3 AL357500.1-201ENST00000413004 279 ntTSL 3 BASIC2.04□□□□□ -2.08
SMKR1H3BMG3 AC073311.1-201ENST00000420146 505 ntTSL 5 BASIC2.04□□□□□ -2.08
SMKR1H3BMG3 AL354692.1-201ENST00000423044 315 ntBASIC2.04□□□□□ -2.08
SMKR1H3BMG3 ISCA1P1-201ENST00000426679 387 ntBASIC2.04□□□□□ -2.08
SMKR1H3BMG3 MICF-203ENST00000432679 129 ntBASIC2.04□□□□□ -2.08
SMKR1H3BMG3 AL161935.3-201ENST00000433770 347 ntTSL 2 BASIC2.04□□□□□ -2.08
SMKR1H3BMG3 AC004869.2-201ENST00000436501 229 ntTSL 3 BASIC2.04□□□□□ -2.08
SMKR1H3BMG3 AL591503.2-201ENST00000442314 1005 ntBASIC2.04□□□□□ -2.08
SMKR1H3BMG3 HMGN2P10-201ENST00000448085 265 ntBASIC2.04□□□□□ -2.08
SMKR1H3BMG3 AL135787.1-201ENST00000450154 302 ntTSL 3 BASIC2.04□□□□□ -2.08
SMKR1H3BMG3 EEF1B2P7-201ENST00000451177 676 ntBASIC2.04□□□□□ -2.08
SMKR1H3BMG3 AL441989.1-201ENST00000454204 382 ntTSL 3 BASIC2.04□□□□□ -2.08
SMKR1H3BMG3 SLC16A12-AS1-202ENST00000454270 478 ntTSL 2 BASIC2.04□□□□□ -2.08
SMKR1H3BMG3 AL157373.1-201ENST00000456036 276 ntTSL 3 BASIC2.04□□□□□ -2.08
SMKR1H3BMG3 AC091770.1-201ENST00000456513 373 ntTSL 2 BASIC2.04□□□□□ -2.08
SMKR1H3BMG3 AL121769.1-201ENST00000469473 401 ntBASIC2.04□□□□□ -2.08
SMKR1H3BMG3 AC128713.1-201ENST00000471495 306 ntBASIC2.04□□□□□ -2.08
SMKR1H3BMG3 UBE2V1P12-201ENST00000503954 474 ntBASIC2.04□□□□□ -2.08
SMKR1H3BMG3 RPF2P2-201ENST00000504693 896 ntBASIC2.04□□□□□ -2.08
SMKR1H3BMG3 MTND3P3-201ENST00000505004 126 ntBASIC2.04□□□□□ -2.08
SMKR1H3BMG3 AC023141.11-201ENST00000508864 202 ntBASIC2.04□□□□□ -2.08
SMKR1H3BMG3 GYPA-209ENST00000512789 258 ntTSL 1 (best) BASIC2.04□□□□□ -2.08
SMKR1H3BMG3 AC010374.2-201ENST00000512933 535 ntBASIC2.04□□□□□ -2.08
SMKR1H3BMG3 VCAN-AS1-202ENST00000513899 453 ntTSL 3 BASIC2.04□□□□□ -2.08
SMKR1H3BMG3 SNORA31.3-201ENST00000516029 96 ntBASIC2.04□□□□□ -2.08
SMKR1H3BMG3 SNORA31.6-201ENST00000516241 130 ntBASIC2.04□□□□□ -2.08
SMKR1H3BMG3 SNORD19.2-201ENST00000516978 73 ntBASIC2.04□□□□□ -2.08
SMKR1H3BMG3 RNU1-104P-201ENST00000517280 175 ntBASIC2.04□□□□□ -2.08
SMKR1H3BMG3 AC087362.1-201ENST00000527912 434 ntTSL 5 BASIC2.04□□□□□ -2.08
SMKR1H3BMG3 HPRT1P3-201ENST00000539521 576 ntBASIC2.04□□□□□ -2.08
SMKR1H3BMG3 LINC02350-201ENST00000544419 480 ntTSL 3 BASIC2.04□□□□□ -2.08
SMKR1H3BMG3 AC021739.1-201ENST00000559631 174 ntBASIC2.04□□□□□ -2.08
SMKR1H3BMG3 AC024270.4-201ENST00000570202 421 ntTSL 3 BASIC2.04□□□□□ -2.08
SMKR1H3BMG3 MIR4446-201ENST00000578505 67 ntBASIC2.04□□□□□ -2.08
SMKR1H3BMG3 MSMB-202ENST00000582163 488 ntAPPRIS P1 TSL 1 (best) BASIC2.04□□□□□ -2.08
SMKR1H3BMG3 MIR4293-201ENST00000584305 78 ntBASIC2.04□□□□□ -2.08
SMKR1H3BMG3 AL356575.1-201ENST00000603008 283 ntBASIC2.04□□□□□ -2.08
SMKR1H3BMG3 RPL12P50-201ENST00000603116 116 ntBASIC2.04□□□□□ -2.08
SMKR1H3BMG3 AC069200.1-201ENST00000609511 323 ntBASIC2.04□□□□□ -2.08
SMKR1H3BMG3 AC025594.3-201ENST00000613068 790 ntBASIC2.04□□□□□ -2.08
SMKR1H3BMG3 AL136313.1-201ENST00000624804 202 ntBASIC2.04□□□□□ -2.08
SMKR1H3BMG3 COMMD6-213ENST00000626103 120 ntTSL 5 BASIC2.04□□□□□ -2.08
SMKR1H3BMG3 AC013470.2-206ENST00000636804 771 ntAPPRIS P5 TSL 5 BASIC2.04□□□□□ -2.08
SMKR1H3BMG3 AL035425.3-201ENST00000564206 4996 ntBASIC2.04□□□□□ -2.08
SMKR1H3BMG3 DPY19L2P1-203ENST00000458672 3347 ntTSL 1 (best) BASIC2.04□□□□□ -2.08
SMKR1H3BMG3 CEP44-203ENST00000426172 3037 ntTSL 5 BASIC2.04□□□□□ -2.08
SMKR1H3BMG3 LINC01592-202ENST00000518540 2367 ntTSL 2 BASIC2.03□□□□□ -2.08
SMKR1H3BMG3 OR51A7-202ENST00000641490 2186 ntAPPRIS P1 BASIC2.03□□□□□ -2.08
SMKR1H3BMG3 ZNF334-205ENST00000615481 3706 ntAPPRIS ALT2 TSL 5 BASIC2.03□□□□□ -2.08
SMKR1H3BMG3 LRRC6-212ENST00000618342 1754 ntAPPRIS ALT1 TSL 5 BASIC2.03□□□□□ -2.08
SMKR1H3BMG3 NEB-203ENST00000397345 26202 ntAPPRIS ALT2 TSL 5 BASIC2.03□□□□□ -2.08
SMKR1H3BMG3 NEB-209ENST00000427231 26202 ntAPPRIS ALT2 TSL 5 BASIC2.03□□□□□ -2.08
SMKR1H3BMG3 CCDC82-201ENST00000278520 2941 ntAPPRIS P2 TSL 5 BASIC2.03□□□□□ -2.08
SMKR1H3BMG3 APC-201ENST00000257430 10701 ntAPPRIS P1 TSL 5 BASIC2.03□□□□□ -2.08
SMKR1H3BMG3 ZNF29P-201ENST00000225587 168 ntBASIC2.03□□□□□ -2.08
SMKR1H3BMG3 HSFY1-202ENST00000309834 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC2.03□□□□□ -2.08
SMKR1H3BMG3 EDDM3A-201ENST00000326842 927 ntAPPRIS P1 TSL 1 (best) BASIC2.03□□□□□ -2.08
SMKR1H3BMG3 HSFY2-202ENST00000344884 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC2.03□□□□□ -2.08
SMKR1H3BMG3 RNU6-433P-201ENST00000363216 104 ntBASIC2.03□□□□□ -2.08
SMKR1H3BMG3 RNU6-1284P-201ENST00000363701 100 ntBASIC2.03□□□□□ -2.08
SMKR1H3BMG3 SNORA9.2-201ENST00000365361 133 ntBASIC2.03□□□□□ -2.08
SMKR1H3BMG3 EQTN-202ENST00000380032 1033 ntAPPRIS P3 TSL 1 (best) BASIC2.03□□□□□ -2.08
SMKR1H3BMG3 MIR141-201ENST00000384975 95 ntBASIC2.03□□□□□ -2.08
SMKR1H3BMG3 RNU6ATAC-201ENST00000408749 126 ntBASIC2.03□□□□□ -2.08
SMKR1H3BMG3 ZNF90P2-204ENST00000419323 1075 ntBASIC2.03□□□□□ -2.08
SMKR1H3BMG3 AL589946.1-201ENST00000421465 420 ntTSL 3 BASIC2.03□□□□□ -2.08
SMKR1H3BMG3 ZFY-AS1-202ENST00000431145 419 ntTSL 3 BASIC2.03□□□□□ -2.08
SMKR1H3BMG3 FCF1P1-201ENST00000432690 571 ntBASIC2.03□□□□□ -2.08
SMKR1H3BMG3 RPL36AP53-201ENST00000432891 316 ntBASIC2.03□□□□□ -2.08
SMKR1H3BMG3 GSAP-208ENST00000441833 737 ntTSL 1 (best) BASIC2.03□□□□□ -2.08
SMKR1H3BMG3 RPS24P13-201ENST00000442520 397 ntBASIC2.03□□□□□ -2.08
SMKR1H3BMG3 NAALADL2-AS3-202ENST00000453180 413 ntTSL 3 BASIC2.03□□□□□ -2.08
SMKR1H3BMG3 MTATP6P7-201ENST00000453315 681 ntBASIC2.03□□□□□ -2.08
SMKR1H3BMG3 RBM43P1-201ENST00000476891 1081 ntBASIC2.03□□□□□ -2.08
SMKR1H3BMG3 AC090525.1-201ENST00000479116 478 ntBASIC2.03□□□□□ -2.08
SMKR1H3BMG3 C4orf33-204ENST00000502887 1126 ntTSL 1 (best) BASIC2.03□□□□□ -2.08
SMKR1H3BMG3 AC106895.1-201ENST00000515825 548 ntTSL 4 BASIC2.03□□□□□ -2.08
SMKR1H3BMG3 AC105185.1-201ENST00000518705 535 ntBASIC2.03□□□□□ -2.08
SMKR1H3BMG3 AC026403.1-201ENST00000518938 295 ntBASIC2.03□□□□□ -2.08
SMKR1H3BMG3 DEFB108A-201ENST00000530110 222 ntBASIC2.03□□□□□ -2.08
SMKR1H3BMG3 AP000907.2-201ENST00000530827 353 ntBASIC2.03□□□□□ -2.08
SMKR1H3BMG3 AP004247.1-201ENST00000531556 1289 ntBASIC2.03□□□□□ -2.08
SMKR1H3BMG3 PCLAF-207ENST00000559519 749 ntTSL 2 BASIC2.03□□□□□ -2.08
SMKR1H3BMG3 BLOC1S6-207ENST00000565216 573 ntTSL 3 BASIC2.03□□□□□ -2.08
SMKR1H3BMG3 AC073878.2-201ENST00000565449 385 ntTSL 3 BASIC2.03□□□□□ -2.08
SMKR1H3BMG3 MIR3670-2-201ENST00000582974 65 ntBASIC2.03□□□□□ -2.08
SMKR1H3BMG3 MIR3605-201ENST00000583214 100 ntBASIC2.03□□□□□ -2.08
SMKR1H3BMG3 MIR3670-1-201ENST00000584160 65 ntBASIC2.03□□□□□ -2.08
SMKR1H3BMG3 MIR3670-3-201ENST00000584855 65 ntBASIC2.03□□□□□ -2.08
Retrieved 100 of 98,524 protein–RNA pairs in 104.4 ms