Protein–RNA interactions for Protein: A7MD48

SRRM4, Serine/arginine repetitive matrix protein 4, humanhuman

Known RBP Predictions only

Length 611 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM4A7MD48 AC003687.1-201ENST00000578040 427 ntTSL 3 BASIC2.74□□□□□ -1.97
SRRM4A7MD48 MIR3611-201ENST00000584484 83 ntBASIC2.74□□□□□ -1.97
SRRM4A7MD48 AC009977.1-201ENST00000586015 570 ntBASIC2.74□□□□□ -1.97
SRRM4A7MD48 AC078795.2-201ENST00000602835 1252 ntBASIC2.74□□□□□ -1.97
SRRM4A7MD48 DUXAP4-201ENST00000603046 613 ntBASIC2.74□□□□□ -1.97
SRRM4A7MD48 AC080078.2-201ENST00000603766 501 ntBASIC2.74□□□□□ -1.97
SRRM4A7MD48 AC004492.1-201ENST00000607036 742 ntBASIC2.74□□□□□ -1.97
SRRM4A7MD48 AC097717.1-249ENST00000608040 401 ntTSL 5 BASIC2.74□□□□□ -1.97
SRRM4A7MD48 MIR7851-201ENST00000610611 160 ntBASIC2.74□□□□□ -1.97
SRRM4A7MD48 AC104073.3-201ENST00000610942 955 ntBASIC2.74□□□□□ -1.97
SRRM4A7MD48 AC025594.3-201ENST00000613068 790 ntBASIC2.74□□□□□ -1.97
SRRM4A7MD48 UBE2Q2P2-203ENST00000613592 761 ntBASIC2.74□□□□□ -1.97
SRRM4A7MD48 AL590491.2-201ENST00000614608 499 ntTSL 5 BASIC2.74□□□□□ -1.97
SRRM4A7MD48 MESTIT1_2.1-201ENST00000616328 235 ntBASIC2.74□□□□□ -1.97
SRRM4A7MD48 HOTTIP_4.1-201ENST00000618195 165 ntBASIC2.74□□□□□ -1.97
SRRM4A7MD48 AC006338.1-201ENST00000618453 749 ntBASIC2.74□□□□□ -1.97
SRRM4A7MD48 AC007998.5-201ENST00000622938 237 ntBASIC2.74□□□□□ -1.97
SRRM4A7MD48 MTND5P29-201ENST00000458676 1807 ntBASIC2.74□□□□□ -1.97
SRRM4A7MD48 ZFYVE16-202ENST00000505560 6599 ntAPPRIS P1 TSL 1 (best) BASIC2.74□□□□□ -1.97
SRRM4A7MD48 AC019117.3-201ENST00000637807 3523 ntAPPRIS P1 TSL 5 BASIC2.74□□□□□ -1.97
SRRM4A7MD48 PRKG2-206ENST00000545647 3852 ntTSL 5 BASIC2.74□□□□□ -1.97
SRRM4A7MD48 SLC25A46-206ENST00000509432 1596 ntTSL 2 BASIC2.74□□□□□ -1.97
SRRM4A7MD48 ADGRV1-201ENST00000405460 19557 ntAPPRIS P1 TSL 1 (best) BASIC2.73□□□□□ -1.97
SRRM4A7MD48 ZBTB20-201ENST00000357258 27125 ntAPPRIS P1 TSL 1 (best) BASIC2.73□□□□□ -1.97
SRRM4A7MD48 TOP2A-201ENST00000423485 5758 ntAPPRIS P1 TSL 1 (best) BASIC2.73□□□□□ -1.97
SRRM4A7MD48 TECRL-202ENST00000507440 2876 ntTSL 5 BASIC2.73□□□□□ -1.97
SRRM4A7MD48 DOPEY1-203ENST00000369739 7743 ntAPPRIS ALT1 TSL 1 (best) BASIC2.73□□□□□ -1.97
SRRM4A7MD48 OR10A7-201ENST00000326258 951 ntAPPRIS P1 BASIC2.73□□□□□ -1.97
SRRM4A7MD48 RNU6-805P-201ENST00000365643 106 ntBASIC2.73□□□□□ -1.97
SRRM4A7MD48 AKAP14-202ENST00000371422 412 ntAPPRIS ALT2 TSL 1 (best) BASIC2.73□□□□□ -1.97
SRRM4A7MD48 RFX3-203ENST00000381984 364 ntTSL 3 BASIC2.73□□□□□ -1.97
SRRM4A7MD48 RNU6-217P-201ENST00000384164 104 ntBASIC2.73□□□□□ -1.97
SRRM4A7MD48 SNORD17-201ENST00000390930 237 ntBASIC2.73□□□□□ -1.97
SRRM4A7MD48 RNU6-817P-201ENST00000391083 104 ntBASIC2.73□□□□□ -1.97
SRRM4A7MD48 RPL23AP32-201ENST00000395315 459 ntBASIC2.73□□□□□ -1.97
SRRM4A7MD48 STAP1-202ENST00000396225 1146 ntAPPRIS P1 TSL 1 (best) BASIC2.73□□□□□ -1.97
SRRM4A7MD48 NDUFS5P1-201ENST00000405668 289 ntBASIC2.73□□□□□ -1.97
SRRM4A7MD48 RNU6-648P-201ENST00000410190 107 ntBASIC2.73□□□□□ -1.97
SRRM4A7MD48 AC126124.2-201ENST00000413542 321 ntBASIC2.73□□□□□ -1.97
SRRM4A7MD48 AC069157.1-201ENST00000421749 137 ntBASIC2.73□□□□□ -1.97
SRRM4A7MD48 MTCO2P34-201ENST00000421994 607 ntBASIC2.73□□□□□ -1.97
SRRM4A7MD48 LINC01402-201ENST00000422226 279 ntTSL 3 BASIC2.73□□□□□ -1.97
SRRM4A7MD48 LINC01037-201ENST00000427337 424 ntTSL 5 BASIC2.73□□□□□ -1.97
SRRM4A7MD48 USP9YP14-201ENST00000430663 563 ntBASIC2.73□□□□□ -1.97
SRRM4A7MD48 AC007389.2-201ENST00000434630 306 ntBASIC2.73□□□□□ -1.97
SRRM4A7MD48 AL365258.1-201ENST00000440885 247 ntTSL 3 BASIC2.73□□□□□ -1.97
SRRM4A7MD48 USP9YP15-201ENST00000442391 422 ntBASIC2.73□□□□□ -1.97
SRRM4A7MD48 AL138799.4-201ENST00000443939 643 ntTSL 3 BASIC2.73□□□□□ -1.97
SRRM4A7MD48 AC008264.1-201ENST00000447612 367 ntBASIC2.73□□□□□ -1.97
SRRM4A7MD48 RBMY2UP-201ENST00000453474 324 ntBASIC2.73□□□□□ -1.97
SRRM4A7MD48 RNU6-956P-201ENST00000458868 103 ntBASIC2.73□□□□□ -1.97
SRRM4A7MD48 SNORD42A-201ENST00000459584 64 ntBASIC2.73□□□□□ -1.97
SRRM4A7MD48 RPL23AP67-201ENST00000465341 474 ntBASIC2.73□□□□□ -1.97
SRRM4A7MD48 AP002884.2-201ENST00000471647 395 ntBASIC2.73□□□□□ -1.97
SRRM4A7MD48 KC877373.1-201ENST00000479066 408 ntBASIC2.73□□□□□ -1.97
SRRM4A7MD48 RPS4XP22-201ENST00000480755 780 ntBASIC2.73□□□□□ -1.97
SRRM4A7MD48 AC010587.1-201ENST00000505809 469 ntBASIC2.73□□□□□ -1.97
SRRM4A7MD48 AL136537.1-201ENST00000508199 538 ntTSL 3 BASIC2.73□□□□□ -1.97
SRRM4A7MD48 RNU4ATAC15P-201ENST00000516415 126 ntBASIC2.73□□□□□ -1.97
SRRM4A7MD48 IGKV2-26-201ENST00000518305 343 ntBASIC2.73□□□□□ -1.97
SRRM4A7MD48 TRMT10BP1-201ENST00000519377 943 ntBASIC2.73□□□□□ -1.97
SRRM4A7MD48 ZDHHC20P3-201ENST00000531576 336 ntBASIC2.73□□□□□ -1.97
SRRM4A7MD48 AP000867.2-201ENST00000532468 320 ntBASIC2.73□□□□□ -1.97
SRRM4A7MD48 AP002453.2-201ENST00000533503 320 ntBASIC2.73□□□□□ -1.97
SRRM4A7MD48 AC012414.6-201ENST00000568241 401 ntBASIC2.73□□□□□ -1.97
SRRM4A7MD48 MIR3186-201ENST00000577404 85 ntBASIC2.73□□□□□ -1.97
SRRM4A7MD48 MIR5047-201ENST00000579212 100 ntBASIC2.73□□□□□ -1.97
SRRM4A7MD48 LINC01909-202ENST00000584919 815 ntTSL 3 BASIC2.73□□□□□ -1.97
SRRM4A7MD48 GLUD1P4-201ENST00000590914 418 ntBASIC2.73□□□□□ -1.97
SRRM4A7MD48 AC108747.1-201ENST00000609508 535 ntBASIC2.73□□□□□ -1.97
SRRM4A7MD48 LINC02033-202ENST00000623312 492 ntTSL 3 BASIC2.73□□□□□ -1.97
SRRM4A7MD48 AL392088.2-201ENST00000637607 285 ntBASIC2.73□□□□□ -1.97
SRRM4A7MD48 FARSBP1-201ENST00000435808 1778 ntBASIC2.73□□□□□ -1.97
SRRM4A7MD48 C12orf4-201ENST00000261250 3826 ntAPPRIS P1 TSL 1 (best) BASIC2.73□□□□□ -1.97
SRRM4A7MD48 MBNL3-204ENST00000370853 2661 ntAPPRIS P4 TSL 1 (best) BASIC2.73□□□□□ -1.97
SRRM4A7MD48 MACC1-205ENST00000589011 2686 ntAPPRIS P1 TSL 5 BASIC2.73□□□□□ -1.97
SRRM4A7MD48 MME-211ENST00000492661 2854 ntAPPRIS P1 TSL 2 BASIC2.72□□□□□ -1.97
SRRM4A7MD48 CNOT6L-201ENST00000504123 8843 ntAPPRIS P1 TSL 2 BASIC2.72□□□□□ -1.97
SRRM4A7MD48 ATP2C1-202ENST00000359644 3401 ntAPPRIS P3 TSL 1 (best) BASIC2.72□□□□□ -1.97
SRRM4A7MD48 GNG5P1-201ENST00000255500 204 ntBASIC2.72□□□□□ -1.97
SRRM4A7MD48 TEX43-201ENST00000357147 464 ntAPPRIS P1 TSL 1 (best) BASIC2.72□□□□□ -1.97
SRRM4A7MD48 RNU4-35P-201ENST00000362588 141 ntBASIC2.72□□□□□ -1.97
SRRM4A7MD48 RNA5SP197-201ENST00000363357 119 ntBASIC2.72□□□□□ -1.97
SRRM4A7MD48 RNU6-511P-201ENST00000363496 107 ntBASIC2.72□□□□□ -1.97
SRRM4A7MD48 RNU6-799P-201ENST00000363567 107 ntBASIC2.72□□□□□ -1.97
SRRM4A7MD48 RNU6-960P-201ENST00000364056 120 ntBASIC2.72□□□□□ -1.97
SRRM4A7MD48 Y_RNA.245-201ENST00000364493 95 ntBASIC2.72□□□□□ -1.97
SRRM4A7MD48 EQTN-201ENST00000380031 725 ntAPPRIS ALT2 TSL 1 (best) BASIC2.72□□□□□ -1.97
SRRM4A7MD48 MIR325-201ENST00000385260 98 ntBASIC2.72□□□□□ -1.97
SRRM4A7MD48 MS4A4E-201ENST00000398984 479 ntTSL 5 BASIC2.72□□□□□ -1.97
SRRM4A7MD48 RNU6ATAC-201ENST00000408749 126 ntBASIC2.72□□□□□ -1.97
SRRM4A7MD48 RPS3AP3-201ENST00000411933 242 ntBASIC2.72□□□□□ -1.97
SRRM4A7MD48 NBDY-202ENST00000423617 543 ntAPPRIS P1 TSL 2 BASIC2.72□□□□□ -1.97
SRRM4A7MD48 AC005062.1-206ENST00000424516 710 ntTSL 3 BASIC2.72□□□□□ -1.97
SRRM4A7MD48 HTR2A-AS1-201ENST00000430913 429 ntTSL 3 BASIC2.72□□□□□ -1.97
SRRM4A7MD48 AL135908.1-201ENST00000431394 446 ntTSL 3 BASIC2.72□□□□□ -1.97
SRRM4A7MD48 AC073063.1-201ENST00000434352 607 ntBASIC2.72□□□□□ -1.97
SRRM4A7MD48 RPL36AP6-201ENST00000435770 321 ntBASIC2.72□□□□□ -1.97
SRRM4A7MD48 RPL23AP22-201ENST00000437556 453 ntBASIC2.72□□□□□ -1.97
SRRM4A7MD48 MTND6P13-201ENST00000443510 523 ntBASIC2.72□□□□□ -1.97
Retrieved 100 of 98,524 protein–RNA pairs in 117.7 ms