Protein–RNA interactions for Protein: A6NMK7

CPSF4L, Putative cleavage and polyadenylation specificity factor subunit 4-like protein, humanhuman

Known RBP Predictions only

Length 179 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4LA6NMK7 AC008526.1-201ENST00000509149 338 ntBASIC0.92□□□□□ -2.26
CPSF4LA6NMK7 NPM1P52-201ENST00000518264 846 ntBASIC0.92□□□□□ -2.26
CPSF4LA6NMK7 AP001804.3-201ENST00000525146 880 ntBASIC0.92□□□□□ -2.26
CPSF4LA6NMK7 RERG-IT1-201ENST00000539734 301 ntTSL 3 BASIC0.92□□□□□ -2.26
CPSF4LA6NMK7 AC026771.1-201ENST00000564672 415 ntTSL 2 BASIC0.92□□□□□ -2.26
CPSF4LA6NMK7 AL355812.1-201ENST00000603215 216 ntBASIC0.92□□□□□ -2.26
CPSF4LA6NMK7 AP000942.3-201ENST00000603702 160 ntBASIC0.92□□□□□ -2.26
CPSF4LA6NMK7 AP001485.1-201ENST00000604799 199 ntBASIC0.92□□□□□ -2.26
CPSF4LA6NMK7 AC106052.1-201ENST00000608029 497 ntBASIC0.92□□□□□ -2.26
CPSF4LA6NMK7 AP005137.2-201ENST00000609238 400 ntBASIC0.92□□□□□ -2.26
CPSF4LA6NMK7 AC025588.4-201ENST00000615802 908 ntBASIC0.92□□□□□ -2.26
CPSF4LA6NMK7 SDAD1P2-201ENST00000441308 2028 ntBASIC0.92□□□□□ -2.26
CPSF4LA6NMK7 AC080128.1-201ENST00000474389 1917 ntBASIC0.91□□□□□ -2.26
CPSF4LA6NMK7 SNHG14-215ENST00000551631 4008 ntTSL 5 BASIC0.91□□□□□ -2.26
CPSF4LA6NMK7 RNU6-837P-201ENST00000391056 108 ntBASIC0.91□□□□□ -2.26
CPSF4LA6NMK7 NPM1P10-201ENST00000398310 865 ntBASIC0.91□□□□□ -2.26
CPSF4LA6NMK7 AL035405.1-201ENST00000400795 710 ntBASIC0.91□□□□□ -2.26
CPSF4LA6NMK7 AL512604.1-201ENST00000404812 257 ntBASIC0.91□□□□□ -2.26
CPSF4LA6NMK7 OR9R1P-201ENST00000412200 877 ntBASIC0.91□□□□□ -2.26
CPSF4LA6NMK7 AL161449.1-201ENST00000414531 1199 ntBASIC0.91□□□□□ -2.26
CPSF4LA6NMK7 AC007179.1-201ENST00000415159 438 ntTSL 3 BASIC0.91□□□□□ -2.26
CPSF4LA6NMK7 RPL21P90-201ENST00000415692 466 ntBASIC0.91□□□□□ -2.26
CPSF4LA6NMK7 AC003075.1-202ENST00000419382 720 ntTSL 3 BASIC0.91□□□□□ -2.26
CPSF4LA6NMK7 SEPT2P1-201ENST00000419651 180 ntBASIC0.91□□□□□ -2.26
CPSF4LA6NMK7 AL365496.1-201ENST00000426885 215 ntBASIC0.91□□□□□ -2.26
CPSF4LA6NMK7 USP12PX-201ENST00000432383 1057 ntBASIC0.91□□□□□ -2.26
CPSF4LA6NMK7 FKBP7-205ENST00000434643 666 ntAPPRIS ALT2 TSL 1 (best) BASIC0.91□□□□□ -2.26
CPSF4LA6NMK7 AC004383.1-201ENST00000438135 289 ntBASIC0.91□□□□□ -2.26
CPSF4LA6NMK7 AP000146.1-202ENST00000441666 441 ntTSL 3 BASIC0.91□□□□□ -2.26
CPSF4LA6NMK7 AL359385.1-201ENST00000456509 365 ntBASIC0.91□□□□□ -2.26
CPSF4LA6NMK7 AL139260.1-202ENST00000456813 441 ntTSL 3 BASIC0.91□□□□□ -2.26
CPSF4LA6NMK7 LINC02118-201ENST00000505899 407 ntTSL 3 BASIC0.91□□□□□ -2.26
CPSF4LA6NMK7 MRPS33P3-201ENST00000513456 322 ntBASIC0.91□□□□□ -2.26
CPSF4LA6NMK7 AC093879.2-201ENST00000513645 427 ntTSL 3 BASIC0.91□□□□□ -2.26
CPSF4LA6NMK7 AC010280.1-201ENST00000515199 340 ntTSL 2 BASIC0.91□□□□□ -2.26
CPSF4LA6NMK7 CA1-215ENST00000522389 551 ntTSL 3 BASIC0.91□□□□□ -2.26
CPSF4LA6NMK7 AP005639.2-201ENST00000527592 928 ntBASIC0.91□□□□□ -2.26
CPSF4LA6NMK7 EIF4EP5-201ENST00000528228 640 ntBASIC0.91□□□□□ -2.26
CPSF4LA6NMK7 AC087242.1-201ENST00000536931 572 ntTSL 4 BASIC0.91□□□□□ -2.26
CPSF4LA6NMK7 SUB1P3-201ENST00000564581 315 ntBASIC0.91□□□□□ -2.26
CPSF4LA6NMK7 AC087481.2-201ENST00000565492 330 ntBASIC0.91□□□□□ -2.26
CPSF4LA6NMK7 MIR4299-201ENST00000577899 72 ntBASIC0.91□□□□□ -2.26
CPSF4LA6NMK7 AC090666.1-201ENST00000578241 445 ntBASIC0.91□□□□□ -2.26
CPSF4LA6NMK7 MIR4524B-201ENST00000581569 115 ntBASIC0.91□□□□□ -2.26
CPSF4LA6NMK7 AL355810.1-201ENST00000614629 552 ntBASIC0.91□□□□□ -2.26
CPSF4LA6NMK7 AC079395.3-201ENST00000615161 484 ntBASIC0.91□□□□□ -2.26
CPSF4LA6NMK7 AC005858.4-201ENST00000623191 700 ntBASIC0.91□□□□□ -2.26
CPSF4LA6NMK7 AC007785.2-201ENST00000598627 1916 ntBASIC0.91□□□□□ -2.26
CPSF4LA6NMK7 FGF7-202ENST00000560270 1688 ntTSL 1 (best) BASIC0.91□□□□□ -2.26
CPSF4LA6NMK7 TECRL-202ENST00000507440 2876 ntTSL 5 BASIC0.9□□□□□ -2.26
CPSF4LA6NMK7 CCT4P2-201ENST00000233836 1548 ntBASIC0.9□□□□□ -2.26
CPSF4LA6NMK7 MGAT4C-209ENST00000611864 25116 ntAPPRIS P1 TSL 5 BASIC0.9□□□□□ -2.26
CPSF4LA6NMK7 DDX10P1-201ENST00000448545 1933 ntBASIC0.9□□□□□ -2.27
CPSF4LA6NMK7 RNU6-666P-201ENST00000363499 107 ntBASIC0.9□□□□□ -2.27
CPSF4LA6NMK7 RNU4-38P-201ENST00000364472 129 ntBASIC0.9□□□□□ -2.27
CPSF4LA6NMK7 RNU6-19P-201ENST00000384718 107 ntBASIC0.9□□□□□ -2.27
CPSF4LA6NMK7 SFR1P1-201ENST00000403720 688 ntBASIC0.9□□□□□ -2.27
CPSF4LA6NMK7 TMEM167AP1-201ENST00000423409 219 ntBASIC0.9□□□□□ -2.27
CPSF4LA6NMK7 MTCYBP29-201ENST00000436327 1006 ntBASIC0.9□□□□□ -2.27
CPSF4LA6NMK7 SNRPFP4-201ENST00000456366 242 ntBASIC0.9□□□□□ -2.27
CPSF4LA6NMK7 PABPC1P3-201ENST00000469174 459 ntBASIC0.9□□□□□ -2.27
CPSF4LA6NMK7 AC087884.1-201ENST00000469738 328 ntBASIC0.9□□□□□ -2.27
CPSF4LA6NMK7 LINC02270-201ENST00000505386 610 ntTSL 1 (best) BASIC0.9□□□□□ -2.27
CPSF4LA6NMK7 AC091906.1-201ENST00000511310 391 ntTSL 2 BASIC0.9□□□□□ -2.27
CPSF4LA6NMK7 MRPS36P2-201ENST00000512569 299 ntBASIC0.9□□□□□ -2.27
CPSF4LA6NMK7 RNU4ATAC11P-201ENST00000515939 126 ntBASIC0.9□□□□□ -2.27
CPSF4LA6NMK7 SNORA31.8-201ENST00000516327 108 ntBASIC0.9□□□□□ -2.27
CPSF4LA6NMK7 IFNG-AS1-201ENST00000536914 494 ntTSL 5 BASIC0.9□□□□□ -2.27
CPSF4LA6NMK7 AL049775.2-201ENST00000557547 558 ntTSL 4 BASIC0.9□□□□□ -2.27
CPSF4LA6NMK7 LINC02253-201ENST00000559321 448 ntTSL 2 BASIC0.9□□□□□ -2.27
CPSF4LA6NMK7 AC091563.1-202ENST00000574086 522 ntTSL 5 BASIC0.9□□□□□ -2.27
CPSF4LA6NMK7 MIR4285-201ENST00000581001 85 ntBASIC0.9□□□□□ -2.27
CPSF4LA6NMK7 AC105094.2-203ENST00000590357 555 ntTSL 4 BASIC0.9□□□□□ -2.27
CPSF4LA6NMK7 AP001542.2-201ENST00000593141 364 ntBASIC0.9□□□□□ -2.27
CPSF4LA6NMK7 AC025165.5-201ENST00000602802 578 ntBASIC0.9□□□□□ -2.27
CPSF4LA6NMK7 AC080078.3-201ENST00000605407 463 ntBASIC0.9□□□□□ -2.27
CPSF4LA6NMK7 AC103810.9-201ENST00000606688 112 ntBASIC0.9□□□□□ -2.27
CPSF4LA6NMK7 GPR22-201ENST00000304402 2942 ntAPPRIS P1 TSL 1 (best) BASIC0.89□□□□□ -2.27
CPSF4LA6NMK7 ZNF679-201ENST00000255746 1297 ntAPPRIS P1 TSL 1 (best) BASIC0.89□□□□□ -2.27
CPSF4LA6NMK7 EDDM3A-201ENST00000326842 927 ntAPPRIS P1 TSL 1 (best) BASIC0.89□□□□□ -2.27
CPSF4LA6NMK7 RNU1-105P-201ENST00000363470 161 ntBASIC0.89□□□□□ -2.27
CPSF4LA6NMK7 SNORA23-201ENST00000365128 182 ntBASIC0.89□□□□□ -2.27
CPSF4LA6NMK7 SNORA22-201ENST00000383907 134 ntBASIC0.89□□□□□ -2.27
CPSF4LA6NMK7 SNORA22C-201ENST00000384614 134 ntBASIC0.89□□□□□ -2.27
CPSF4LA6NMK7 MAGI2-AS2-201ENST00000411616 476 ntTSL 2 BASIC0.89□□□□□ -2.27
CPSF4LA6NMK7 AC009411.1-202ENST00000412424 548 ntTSL 4 BASIC0.89□□□□□ -2.27
CPSF4LA6NMK7 AC004870.3-202ENST00000412996 432 ntTSL 3 BASIC0.89□□□□□ -2.27
CPSF4LA6NMK7 AC009276.1-201ENST00000422042 253 ntTSL 5 BASIC0.89□□□□□ -2.27
CPSF4LA6NMK7 EIF4EP4-201ENST00000424916 578 ntBASIC0.89□□□□□ -2.27
CPSF4LA6NMK7 AL353729.1-201ENST00000425044 720 ntBASIC0.89□□□□□ -2.27
CPSF4LA6NMK7 AL360175.1-201ENST00000426547 285 ntTSL 5 BASIC0.89□□□□□ -2.27
CPSF4LA6NMK7 LINC01953-201ENST00000426870 717 ntTSL 5 BASIC0.89□□□□□ -2.27
CPSF4LA6NMK7 AL353689.1-201ENST00000438895 199 ntBASIC0.89□□□□□ -2.27
CPSF4LA6NMK7 AC018643.1-201ENST00000445459 414 ntTSL 5 BASIC0.89□□□□□ -2.27
CPSF4LA6NMK7 AL357140.2-201ENST00000445884 440 ntTSL 3 BASIC0.89□□□□□ -2.27
CPSF4LA6NMK7 MYCBP2-AS1-203ENST00000450627 349 ntTSL 3 BASIC0.89□□□□□ -2.27
CPSF4LA6NMK7 AC233982.1-201ENST00000451247 436 ntBASIC0.89□□□□□ -2.27
CPSF4LA6NMK7 AC109992.2-201ENST00000460977 765 ntTSL 3 BASIC0.89□□□□□ -2.27
CPSF4LA6NMK7 AC107626.1-201ENST00000471084 183 ntBASIC0.89□□□□□ -2.27
CPSF4LA6NMK7 AC117503.1-201ENST00000472241 394 ntBASIC0.89□□□□□ -2.27
Retrieved 100 of 98,524 protein–RNA pairs in 102.5 ms