Protein–RNA interactions for Protein: Q9Y6N9

USH1C, Harmonin, humanhuman

Predictions only

Length 552 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USH1CQ9Y6N9 RPS3P1-201ENST00000456781 192 ntBASIC2.15□□□□□ -2.07
USH1CQ9Y6N9 AC126389.1-201ENST00000477436 290 ntBASIC2.15□□□□□ -2.07
USH1CQ9Y6N9 RN7SL429P-201ENST00000479090 223 ntBASIC2.15□□□□□ -2.07
USH1CQ9Y6N9 RN7SL489P-201ENST00000486185 223 ntBASIC2.15□□□□□ -2.07
USH1CQ9Y6N9 LARP1BP2-201ENST00000486594 519 ntBASIC2.15□□□□□ -2.07
USH1CQ9Y6N9 RN7SL327P-201ENST00000488659 223 ntBASIC2.15□□□□□ -2.07
USH1CQ9Y6N9 RPL23AP49-201ENST00000492925 468 ntBASIC2.15□□□□□ -2.07
USH1CQ9Y6N9 AC022493.1-201ENST00000492984 337 ntBASIC2.15□□□□□ -2.07
USH1CQ9Y6N9 LINC01612-201ENST00000504509 469 ntTSL 3 BASIC2.15□□□□□ -2.07
USH1CQ9Y6N9 LINC02428-201ENST00000508099 527 ntTSL 5 BASIC2.15□□□□□ -2.07
USH1CQ9Y6N9 SCARNA15.2-201ENST00000516409 127 ntBASIC2.15□□□□□ -2.07
USH1CQ9Y6N9 RNA5SP148-201ENST00000516527 94 ntBASIC2.15□□□□□ -2.07
USH1CQ9Y6N9 RNU6-1261P-201ENST00000517194 104 ntBASIC2.15□□□□□ -2.07
USH1CQ9Y6N9 MTCYBP20-201ENST00000524239 1129 ntBASIC2.15□□□□□ -2.07
USH1CQ9Y6N9 NDUFS5P6-201ENST00000529136 295 ntBASIC2.15□□□□□ -2.07
USH1CQ9Y6N9 MYRFL-202ENST00000535034 881 ntTSL 1 (best) BASIC2.15□□□□□ -2.07
USH1CQ9Y6N9 AC092745.2-201ENST00000537764 620 ntTSL 3 BASIC2.15□□□□□ -2.07
USH1CQ9Y6N9 MRPL42-203ENST00000547098 701 ntTSL 3 BASIC2.15□□□□□ -2.07
USH1CQ9Y6N9 AC011611.4-201ENST00000547721 779 ntTSL 2 BASIC2.15□□□□□ -2.07
USH1CQ9Y6N9 AC125611.1-201ENST00000549563 229 ntBASIC2.15□□□□□ -2.07
USH1CQ9Y6N9 AL133166.1-201ENST00000551040 1034 ntTSL 4 BASIC2.15□□□□□ -2.07
USH1CQ9Y6N9 AC009097.3-201ENST00000563557 1018 ntBASIC2.15□□□□□ -2.07
USH1CQ9Y6N9 LRRC37A5P-203ENST00000580181 585 ntBASIC2.15□□□□□ -2.07
USH1CQ9Y6N9 OR4K7P-201ENST00000580232 945 ntBASIC2.15□□□□□ -2.07
USH1CQ9Y6N9 MIR7515HG-213ENST00000585872 758 ntTSL 5 BASIC2.15□□□□□ -2.07
USH1CQ9Y6N9 AP001429.1-201ENST00000602568 530 ntBASIC2.15□□□□□ -2.07
USH1CQ9Y6N9 MIR6817-201ENST00000615588 66 ntBASIC2.15□□□□□ -2.07
USH1CQ9Y6N9 RN7SL853P-201ENST00000617250 223 ntBASIC2.15□□□□□ -2.07
USH1CQ9Y6N9 DUXAP9-208ENST00000622815 614 ntBASIC2.15□□□□□ -2.07
USH1CQ9Y6N9 OR8K3-202ENST00000623845 939 ntAPPRIS P1 BASIC2.15□□□□□ -2.07
USH1CQ9Y6N9 CU459211.1-201ENST00000635667 749 ntBASIC2.15□□□□□ -2.07
USH1CQ9Y6N9 AC010149.2-201ENST00000637608 315 ntBASIC2.15□□□□□ -2.07
USH1CQ9Y6N9 MIR7515-201ENST00000637837 67 ntBASIC2.15□□□□□ -2.07
USH1CQ9Y6N9 RPAP3-202ENST00000380650 2149 ntTSL 1 (best) BASIC2.15□□□□□ -2.07
USH1CQ9Y6N9 SCOC-202ENST00000394201 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC2.15□□□□□ -2.07
USH1CQ9Y6N9 AL359851.1-201ENST00000569460 4997 ntBASIC2.15□□□□□ -2.07
USH1CQ9Y6N9 ATP13A3-201ENST00000256031 7322 ntAPPRIS P1 TSL 5 BASIC2.15□□□□□ -2.07
USH1CQ9Y6N9 ZNF451-208ENST00000491832 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC2.15□□□□□ -2.07
USH1CQ9Y6N9 RNA5SP68-201ENST00000363885 119 ntBASIC2.14□□□□□ -2.07
USH1CQ9Y6N9 RNA5SP160-201ENST00000364866 120 ntBASIC2.14□□□□□ -2.07
USH1CQ9Y6N9 RNA5SP126-201ENST00000365092 109 ntBASIC2.14□□□□□ -2.07
USH1CQ9Y6N9 SNORA67.4-201ENST00000384688 142 ntBASIC2.14□□□□□ -2.07
USH1CQ9Y6N9 SNORA48.3-201ENST00000391081 134 ntBASIC2.14□□□□□ -2.07
USH1CQ9Y6N9 RPL22P22-201ENST00000395439 379 ntBASIC2.14□□□□□ -2.07
USH1CQ9Y6N9 AL592310.1-201ENST00000414330 671 ntBASIC2.14□□□□□ -2.07
USH1CQ9Y6N9 RPS7P9-201ENST00000414704 586 ntBASIC2.14□□□□□ -2.07
USH1CQ9Y6N9 AF212831.1-201ENST00000430064 377 ntTSL 3 BASIC2.14□□□□□ -2.07
USH1CQ9Y6N9 AL451074.3-201ENST00000437709 472 ntBASIC2.14□□□□□ -2.07
USH1CQ9Y6N9 AC004485.1-201ENST00000439839 527 ntTSL 5 BASIC2.14□□□□□ -2.07
USH1CQ9Y6N9 AL049734.2-201ENST00000441066 616 ntBASIC2.14□□□□□ -2.07
USH1CQ9Y6N9 MTCYBP11-201ENST00000447254 1109 ntBASIC2.14□□□□□ -2.07
USH1CQ9Y6N9 EEF1B2P7-201ENST00000451177 676 ntBASIC2.14□□□□□ -2.07
USH1CQ9Y6N9 AC092666.1-201ENST00000492054 573 ntTSL 4 BASIC2.14□□□□□ -2.07
USH1CQ9Y6N9 ANKRD36B-207ENST00000497329 649 ntTSL 1 (best) BASIC2.14□□□□□ -2.07
USH1CQ9Y6N9 MTCO2P9-201ENST00000503214 694 ntBASIC2.14□□□□□ -2.07
USH1CQ9Y6N9 AC109329.2-201ENST00000519658 482 ntBASIC2.14□□□□□ -2.07
USH1CQ9Y6N9 ZFPM2-AS1-204ENST00000520433 748 ntTSL 3 BASIC2.14□□□□□ -2.07
USH1CQ9Y6N9 MIR100HG-213ENST00000531470 560 ntTSL 4 BASIC2.14□□□□□ -2.07
USH1CQ9Y6N9 PLCZ1-203ENST00000534932 525 ntTSL 4 BASIC2.14□□□□□ -2.07
USH1CQ9Y6N9 AP002770.2-201ENST00000543613 532 ntBASIC2.14□□□□□ -2.07
USH1CQ9Y6N9 AC007610.2-201ENST00000566770 666 ntTSL 3 BASIC2.14□□□□□ -2.07
USH1CQ9Y6N9 MIR3935-201ENST00000583472 104 ntBASIC2.14□□□□□ -2.07
USH1CQ9Y6N9 AC002984.1-201ENST00000591692 448 ntBASIC2.14□□□□□ -2.07
USH1CQ9Y6N9 AL356280.1-201ENST00000603614 379 ntBASIC2.14□□□□□ -2.07
USH1CQ9Y6N9 AC103710.4-201ENST00000609301 899 ntBASIC2.14□□□□□ -2.07
USH1CQ9Y6N9 uc_338.20-201ENST00000621563 178 ntBASIC2.14□□□□□ -2.07
USH1CQ9Y6N9 AC009902.3-201ENST00000606235 2172 ntBASIC2.14□□□□□ -2.07
USH1CQ9Y6N9 OR2L2-203ENST00000642011 4225 ntAPPRIS P1 BASIC2.14□□□□□ -2.07
USH1CQ9Y6N9 TBC1D15-210ENST00000485960 2489 ntAPPRIS P1 TSL 1 (best) BASIC2.13□□□□□ -2.07
USH1CQ9Y6N9 CCT4P2-201ENST00000233836 1548 ntBASIC2.13□□□□□ -2.07
USH1CQ9Y6N9 MTCO1P9-201ENST00000505577 1534 ntBASIC2.13□□□□□ -2.07
USH1CQ9Y6N9 GNGT1-201ENST00000248572 720 ntAPPRIS P1 TSL 1 (best) BASIC2.13□□□□□ -2.07
USH1CQ9Y6N9 SNORA38-201ENST00000363946 132 ntBASIC2.13□□□□□ -2.07
USH1CQ9Y6N9 MAPK8-202ENST00000374174 739 ntTSL 3 BASIC2.13□□□□□ -2.07
USH1CQ9Y6N9 RNU6-207P-201ENST00000384137 107 ntBASIC2.13□□□□□ -2.07
USH1CQ9Y6N9 SNORA36C-201ENST00000384289 132 ntBASIC2.13□□□□□ -2.07
USH1CQ9Y6N9 AP003170.3-201ENST00000399123 158 ntTSL 5 BASIC2.13□□□□□ -2.07
USH1CQ9Y6N9 RNU4-72P-201ENST00000410754 173 ntBASIC2.13□□□□□ -2.07
USH1CQ9Y6N9 RNA5SP508-201ENST00000411327 119 ntBASIC2.13□□□□□ -2.07
USH1CQ9Y6N9 AC092660.1-201ENST00000420648 371 ntTSL 2 BASIC2.13□□□□□ -2.07
USH1CQ9Y6N9 ABCC5-AS1-201ENST00000422946 469 ntTSL 2 BASIC2.13□□□□□ -2.07
USH1CQ9Y6N9 FAM204CP-201ENST00000424489 642 ntBASIC2.13□□□□□ -2.07
USH1CQ9Y6N9 MTCO2P1-201ENST00000424648 477 ntBASIC2.13□□□□□ -2.07
USH1CQ9Y6N9 AC023590.1-204ENST00000434023 431 ntTSL 5 BASIC2.13□□□□□ -2.07
USH1CQ9Y6N9 MTCYBP45-201ENST00000435243 565 ntBASIC2.13□□□□□ -2.07
USH1CQ9Y6N9 UBE2FP3-201ENST00000436366 524 ntBASIC2.13□□□□□ -2.07
USH1CQ9Y6N9 AC093155.1-201ENST00000440164 826 ntBASIC2.13□□□□□ -2.07
USH1CQ9Y6N9 AC018816.1-203ENST00000441894 338 ntTSL 3 BASIC2.13□□□□□ -2.07
USH1CQ9Y6N9 RPL32P28-201ENST00000443577 397 ntBASIC2.13□□□□□ -2.07
USH1CQ9Y6N9 AL139109.1-201ENST00000455491 297 ntBASIC2.13□□□□□ -2.07
USH1CQ9Y6N9 AC011998.3-201ENST00000457053 254 ntTSL 3 BASIC2.13□□□□□ -2.07
USH1CQ9Y6N9 AC090453.1-201ENST00000495560 436 ntBASIC2.13□□□□□ -2.07
USH1CQ9Y6N9 AC138853.1-201ENST00000503549 823 ntBASIC2.13□□□□□ -2.07
USH1CQ9Y6N9 NDUFB4P2-201ENST00000509515 391 ntBASIC2.13□□□□□ -2.07
USH1CQ9Y6N9 AC008413.1-201ENST00000511864 177 ntBASIC2.13□□□□□ -2.07
USH1CQ9Y6N9 AC027338.1-201ENST00000514840 825 ntBASIC2.13□□□□□ -2.07
USH1CQ9Y6N9 RNU4-29P-201ENST00000515943 174 ntBASIC2.13□□□□□ -2.07
USH1CQ9Y6N9 RNU6-334P-201ENST00000517072 102 ntBASIC2.13□□□□□ -2.07
USH1CQ9Y6N9 RPL7P20-201ENST00000520308 745 ntBASIC2.13□□□□□ -2.07
USH1CQ9Y6N9 AC104248.1-202ENST00000524134 486 ntTSL 5 BASIC2.13□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 96.7 ms