Protein–RNA interactions for Protein: Q9Y5H8

PCDHA3, Protocadherin alpha-3, humanhuman

Predictions only

Length 950 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA3Q9Y5H8 AC008056.1-201ENST00000553322 394 ntTSL 3 BASIC4.05□□□□□ -1.76
PCDHA3Q9Y5H8 MIR4703-201ENST00000577728 79 ntBASIC4.05□□□□□ -1.76
PCDHA3Q9Y5H8 AC006270.2-201ENST00000578523 652 ntBASIC4.05□□□□□ -1.76
PCDHA3Q9Y5H8 AP005264.4-201ENST00000592203 422 ntTSL 5 BASIC4.05□□□□□ -1.76
PCDHA3Q9Y5H8 AC008946.1-201ENST00000599756 421 ntTSL 3 BASIC4.05□□□□□ -1.76
PCDHA3Q9Y5H8 BNIP3P10-201ENST00000605360 577 ntBASIC4.05□□□□□ -1.76
PCDHA3Q9Y5H8 ARF4P1-201ENST00000605447 541 ntBASIC4.05□□□□□ -1.76
PCDHA3Q9Y5H8 AC016747.2-202ENST00000607743 332 ntTSL 5 BASIC4.05□□□□□ -1.76
PCDHA3Q9Y5H8 AC244093.3-201ENST00000615419 411 ntTSL 3 BASIC4.05□□□□□ -1.76
PCDHA3Q9Y5H8 AL589994.2-201ENST00000621124 579 ntBASIC4.05□□□□□ -1.76
PCDHA3Q9Y5H8 AL158835.3-201ENST00000625908 565 ntTSL 5 BASIC4.05□□□□□ -1.76
PCDHA3Q9Y5H8 AC092442.1-201ENST00000636216 138 ntAPPRIS P1 TSL 5 BASIC4.05□□□□□ -1.76
PCDHA3Q9Y5H8 TARID-205ENST00000607033 2960 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
PCDHA3Q9Y5H8 API5P2-201ENST00000397055 1498 ntBASIC4.05□□□□□ -1.76
PCDHA3Q9Y5H8 SETDB2-202ENST00000317257 5619 ntAPPRIS ALT2 TSL 1 (best) BASIC4.04□□□□□ -1.76
PCDHA3Q9Y5H8 AC103710.2-202ENST00000641454 2853 ntBASIC4.04□□□□□ -1.76
PCDHA3Q9Y5H8 Y_RNA.160-201ENST00000363677 92 ntBASIC4.04□□□□□ -1.76
PCDHA3Q9Y5H8 TRAJ7-201ENST00000390530 59 ntAPPRIS P1 BASIC4.04□□□□□ -1.76
PCDHA3Q9Y5H8 RNU6-193P-201ENST00000410977 107 ntBASIC4.04□□□□□ -1.76
PCDHA3Q9Y5H8 AF241725.1-201ENST00000416182 480 ntTSL 3 BASIC4.04□□□□□ -1.76
PCDHA3Q9Y5H8 AC018630.2-202ENST00000422992 927 ntBASIC4.04□□□□□ -1.76
PCDHA3Q9Y5H8 AL157378.1-201ENST00000424506 265 ntTSL 5 BASIC4.04□□□□□ -1.76
PCDHA3Q9Y5H8 SRIP2-201ENST00000428470 166 ntBASIC4.04□□□□□ -1.76
PCDHA3Q9Y5H8 ATP5JP1-201ENST00000431631 322 ntBASIC4.04□□□□□ -1.76
PCDHA3Q9Y5H8 LINC01797-202ENST00000433432 765 ntTSL 3 BASIC4.04□□□□□ -1.76
PCDHA3Q9Y5H8 RPL7P28-201ENST00000437739 740 ntBASIC4.04□□□□□ -1.76
PCDHA3Q9Y5H8 AL121601.2-201ENST00000438019 707 ntBASIC4.04□□□□□ -1.76
PCDHA3Q9Y5H8 AC018643.1-201ENST00000445459 414 ntTSL 5 BASIC4.04□□□□□ -1.76
PCDHA3Q9Y5H8 snoU13.4-201ENST00000458916 104 ntBASIC4.04□□□□□ -1.76
PCDHA3Q9Y5H8 AC046136.1-201ENST00000459855 533 ntTSL 3 BASIC4.04□□□□□ -1.76
PCDHA3Q9Y5H8 RPL21P11-201ENST00000461458 483 ntBASIC4.04□□□□□ -1.76
PCDHA3Q9Y5H8 AC010618.1-201ENST00000469924 477 ntBASIC4.04□□□□□ -1.76
PCDHA3Q9Y5H8 RPL31P13-201ENST00000484151 370 ntBASIC4.04□□□□□ -1.76
PCDHA3Q9Y5H8 AC108860.1-201ENST00000484521 383 ntBASIC4.04□□□□□ -1.76
PCDHA3Q9Y5H8 VN1R105P-201ENST00000486595 910 ntBASIC4.04□□□□□ -1.76
PCDHA3Q9Y5H8 RPL39P36-201ENST00000490784 156 ntBASIC4.04□□□□□ -1.76
PCDHA3Q9Y5H8 EIF4EP3-201ENST00000498782 656 ntBASIC4.04□□□□□ -1.76
PCDHA3Q9Y5H8 MRPL36-203ENST00000505818 595 ntAPPRIS P1 TSL 3 BASIC4.04□□□□□ -1.76
PCDHA3Q9Y5H8 AC005921.1-201ENST00000510589 286 ntBASIC4.04□□□□□ -1.76
PCDHA3Q9Y5H8 AC108078.2-201ENST00000510750 236 ntBASIC4.04□□□□□ -1.76
PCDHA3Q9Y5H8 AC092440.1-201ENST00000512563 571 ntTSL 4 BASIC4.04□□□□□ -1.76
PCDHA3Q9Y5H8 FTH1P9-201ENST00000513251 355 ntBASIC4.04□□□□□ -1.76
PCDHA3Q9Y5H8 SNORA31.3-201ENST00000516029 96 ntBASIC4.04□□□□□ -1.76
PCDHA3Q9Y5H8 AF117829.1-204ENST00000519854 284 ntTSL 3 BASIC4.04□□□□□ -1.76
PCDHA3Q9Y5H8 AL160262.1-201ENST00000522264 254 ntTSL 3 BASIC4.04□□□□□ -1.76
PCDHA3Q9Y5H8 LINCR-0001-203ENST00000524047 545 ntTSL 4 BASIC4.04□□□□□ -1.76
PCDHA3Q9Y5H8 CLEC7A-212ENST00000533022 625 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
PCDHA3Q9Y5H8 CACNA1C-IT2-201ENST00000541871 589 ntTSL 2 BASIC4.04□□□□□ -1.76
PCDHA3Q9Y5H8 AC092326.1-201ENST00000567465 674 ntTSL 3 BASIC4.04□□□□□ -1.76
PCDHA3Q9Y5H8 RPL23AP84-201ENST00000571193 464 ntBASIC4.04□□□□□ -1.76
PCDHA3Q9Y5H8 AC005730.3-201ENST00000583067 366 ntBASIC4.04□□□□□ -1.76
PCDHA3Q9Y5H8 BNIP3P9-201ENST00000603714 553 ntBASIC4.04□□□□□ -1.76
PCDHA3Q9Y5H8 AL137849.1-201ENST00000604767 169 ntBASIC4.04□□□□□ -1.76
PCDHA3Q9Y5H8 AL590392.1-201ENST00000604960 446 ntBASIC4.04□□□□□ -1.76
PCDHA3Q9Y5H8 AL365204.3-201ENST00000612448 685 ntBASIC4.04□□□□□ -1.76
PCDHA3Q9Y5H8 AC010338.1-201ENST00000621823 717 ntBASIC4.04□□□□□ -1.76
PCDHA3Q9Y5H8 KIF2A-205ENST00000506857 2219 ntTSL 2 BASIC4.04□□□□□ -1.76
PCDHA3Q9Y5H8 ATP7A-201ENST00000341514 8483 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
PCDHA3Q9Y5H8 CRISPLD1-205ENST00000523524 2100 ntTSL 2 BASIC4.04□□□□□ -1.76
PCDHA3Q9Y5H8 CCDC110-202ENST00000393540 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC4.04□□□□□ -1.76
PCDHA3Q9Y5H8 NCOA1-202ENST00000348332 6895 ntAPPRIS P4 TSL 1 (best) BASIC4.04□□□□□ -1.76
PCDHA3Q9Y5H8 TMCO5A-203ENST00000558158 2894 ntAPPRIS ALT2 TSL 3 BASIC4.04□□□□□ -1.76
PCDHA3Q9Y5H8 MUC19-205ENST00000454784 24775 ntTSL 5 BASIC4.03□□□□□ -1.76
PCDHA3Q9Y5H8 AL589745.1-201ENST00000421190 3336 ntTSL 5 BASIC4.03□□□□□ -1.76
PCDHA3Q9Y5H8 IGSF11-AS1-201ENST00000477009 1604 ntTSL 2 BASIC4.03□□□□□ -1.76
PCDHA3Q9Y5H8 NLGN1-201ENST00000361589 5092 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
PCDHA3Q9Y5H8 PRO1804-201ENST00000623780 2050 ntBASIC4.03□□□□□ -1.76
PCDHA3Q9Y5H8 RPL26-201ENST00000293842 524 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
PCDHA3Q9Y5H8 NACAP2-201ENST00000318548 624 ntBASIC4.03□□□□□ -1.76
PCDHA3Q9Y5H8 AC007685.1-201ENST00000329806 452 ntBASIC4.03□□□□□ -1.76
PCDHA3Q9Y5H8 RNU6-552P-201ENST00000362869 119 ntBASIC4.03□□□□□ -1.76
PCDHA3Q9Y5H8 Y_RNA.279-201ENST00000364763 95 ntBASIC4.03□□□□□ -1.76
PCDHA3Q9Y5H8 Y_RNA.576-201ENST00000384781 102 ntBASIC4.03□□□□□ -1.76
PCDHA3Q9Y5H8 MIR1183-201ENST00000408856 89 ntBASIC4.03□□□□□ -1.76
PCDHA3Q9Y5H8 AL138760.1-201ENST00000423283 435 ntTSL 3 BASIC4.03□□□□□ -1.76
PCDHA3Q9Y5H8 AC012498.1-201ENST00000424037 437 ntBASIC4.03□□□□□ -1.76
PCDHA3Q9Y5H8 AL691449.1-201ENST00000426570 421 ntBASIC4.03□□□□□ -1.76
PCDHA3Q9Y5H8 IGKV1OR9-2-201ENST00000431378 277 ntBASIC4.03□□□□□ -1.76
PCDHA3Q9Y5H8 LINC00844-201ENST00000432535 477 ntTSL 2 BASIC4.03□□□□□ -1.76
PCDHA3Q9Y5H8 AP000936.1-201ENST00000442124 483 ntTSL 5 BASIC4.03□□□□□ -1.76
PCDHA3Q9Y5H8 AL118520.1-201ENST00000450770 291 ntBASIC4.03□□□□□ -1.76
PCDHA3Q9Y5H8 RPL23AP31-201ENST00000456160 467 ntBASIC4.03□□□□□ -1.76
PCDHA3Q9Y5H8 RPL23AP11-201ENST00000475260 469 ntBASIC4.03□□□□□ -1.76
PCDHA3Q9Y5H8 RPL23AP55-201ENST00000498163 452 ntBASIC4.03□□□□□ -1.76
PCDHA3Q9Y5H8 MFAP3L-206ENST00000506110 548 ntTSL 3 BASIC4.03□□□□□ -1.76
PCDHA3Q9Y5H8 AC098591.2-201ENST00000510152 315 ntBASIC4.03□□□□□ -1.76
PCDHA3Q9Y5H8 AC023141.12-201ENST00000512399 199 ntBASIC4.03□□□□□ -1.76
PCDHA3Q9Y5H8 AC025465.4-201ENST00000513422 638 ntBASIC4.03□□□□□ -1.76
PCDHA3Q9Y5H8 CENPUP1-201ENST00000526649 1202 ntBASIC4.03□□□□□ -1.76
PCDHA3Q9Y5H8 AC104002.1-201ENST00000557025 380 ntTSL 3 BASIC4.03□□□□□ -1.76
PCDHA3Q9Y5H8 MED28P6-201ENST00000558776 231 ntBASIC4.03□□□□□ -1.76
PCDHA3Q9Y5H8 MIR3939-201ENST00000582614 106 ntBASIC4.03□□□□□ -1.76
PCDHA3Q9Y5H8 AC067852.3-201ENST00000589177 561 ntBASIC4.03□□□□□ -1.76
PCDHA3Q9Y5H8 AC104763.2-201ENST00000604179 382 ntBASIC4.03□□□□□ -1.76
PCDHA3Q9Y5H8 AC008945.2-201ENST00000606056 604 ntBASIC4.03□□□□□ -1.76
PCDHA3Q9Y5H8 RNF111-206ENST00000559209 5278 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
PCDHA3Q9Y5H8 PPIP5K2-215ENST00000613674 4933 ntAPPRIS ALT2 TSL 2 BASIC4.03□□□□□ -1.76
PCDHA3Q9Y5H8 ZNF439-201ENST00000304030 2622 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
PCDHA3Q9Y5H8 CNOT4-202ENST00000356162 2594 ntTSL 5 BASIC4.03□□□□□ -1.77
PCDHA3Q9Y5H8 MS4A14-201ENST00000300187 2997 ntAPPRIS P3 TSL 1 (best) BASIC4.02□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 185.9 ms