Protein–RNA interactions for Protein: Q9Y5F3

PCDHB1, Protocadherin beta-1, humanhuman

Predictions only

Length 818 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB1Q9Y5F3 AC010525.2-201ENST00000590920 195 ntBASIC4.09□□□□□ -1.75
PCDHB1Q9Y5F3 AC104763.2-201ENST00000604179 382 ntBASIC4.09□□□□□ -1.75
PCDHB1Q9Y5F3 TMEM212-205ENST00000619900 585 ntAPPRIS P1 TSL 3 BASIC4.09□□□□□ -1.75
PCDHB1Q9Y5F3 THEMIS-202ENST00000368250 4101 ntAPPRIS P3 TSL 5 BASIC4.09□□□□□ -1.75
PCDHB1Q9Y5F3 MCF2-201ENST00000338585 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC4.09□□□□□ -1.75
PCDHB1Q9Y5F3 OR8J3-203ENST00000641913 3047 ntAPPRIS P1 BASIC4.09□□□□□ -1.75
PCDHB1Q9Y5F3 ETV1-202ENST00000399357 6096 ntTSL 2 BASIC4.09□□□□□ -1.75
PCDHB1Q9Y5F3 TBC1D31-210ENST00000521676 3256 ntTSL 5 BASIC4.09□□□□□ -1.76
PCDHB1Q9Y5F3 ITCH-202ENST00000374864 6401 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.76
PCDHB1Q9Y5F3 UBA6-201ENST00000322244 9564 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
PCDHB1Q9Y5F3 NCOA1-202ENST00000348332 6895 ntAPPRIS P4 TSL 1 (best) BASIC4.08□□□□□ -1.76
PCDHB1Q9Y5F3 SELENOI-201ENST00000260585 8101 ntAPPRIS P2 TSL 1 (best) BASIC4.08□□□□□ -1.76
PCDHB1Q9Y5F3 SENP7-202ENST00000348610 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC4.08□□□□□ -1.76
PCDHB1Q9Y5F3 AK9-202ENST00000355283 2499 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
PCDHB1Q9Y5F3 MIR448-201ENST00000362131 111 ntBASIC4.08□□□□□ -1.76
PCDHB1Q9Y5F3 SNORA60-201ENST00000362396 134 ntBASIC4.08□□□□□ -1.76
PCDHB1Q9Y5F3 RNU5A-1-201ENST00000362698 116 ntBASIC4.08□□□□□ -1.76
PCDHB1Q9Y5F3 RNU6-1287P-201ENST00000362914 107 ntBASIC4.08□□□□□ -1.76
PCDHB1Q9Y5F3 SNORD46.1-201ENST00000364139 104 ntBASIC4.08□□□□□ -1.76
PCDHB1Q9Y5F3 Y_RNA.333-201ENST00000365274 102 ntBASIC4.08□□□□□ -1.76
PCDHB1Q9Y5F3 TCEAL7-202ENST00000372666 852 ntAPPRIS P1 TSL 2 BASIC4.08□□□□□ -1.76
PCDHB1Q9Y5F3 DAZ4-202ENST00000382314 3910 ntAPPRIS ALT2 TSL 5 BASIC4.08□□□□□ -1.76
PCDHB1Q9Y5F3 SNORA36C-201ENST00000384289 132 ntBASIC4.08□□□□□ -1.76
PCDHB1Q9Y5F3 RNU6-1060P-201ENST00000384664 107 ntBASIC4.08□□□□□ -1.76
PCDHB1Q9Y5F3 MIR93-201ENST00000385024 80 ntBASIC4.08□□□□□ -1.76
PCDHB1Q9Y5F3 MIR513A2-201ENST00000385249 127 ntBASIC4.08□□□□□ -1.76
PCDHB1Q9Y5F3 RNU6-1009P-201ENST00000390996 107 ntBASIC4.08□□□□□ -1.76
PCDHB1Q9Y5F3 CD3D-202ENST00000392884 476 ntTSL 2 BASIC4.08□□□□□ -1.76
PCDHB1Q9Y5F3 RNA5SP239-201ENST00000410218 129 ntBASIC4.08□□□□□ -1.76
PCDHB1Q9Y5F3 RNA5SP104-201ENST00000410989 118 ntBASIC4.08□□□□□ -1.76
PCDHB1Q9Y5F3 LHFPL3-AS1-203ENST00000417290 950 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
PCDHB1Q9Y5F3 AC009161.1-201ENST00000417306 376 ntBASIC4.08□□□□□ -1.76
PCDHB1Q9Y5F3 AC005062.1-207ENST00000418442 587 ntTSL 3 BASIC4.08□□□□□ -1.76
PCDHB1Q9Y5F3 AC093106.2-201ENST00000428212 385 ntBASIC4.08□□□□□ -1.76
PCDHB1Q9Y5F3 AC079780.1-201ENST00000428259 207 ntBASIC4.08□□□□□ -1.76
PCDHB1Q9Y5F3 AC018644.1-201ENST00000429934 551 ntBASIC4.08□□□□□ -1.76
PCDHB1Q9Y5F3 FTH1P6-201ENST00000430768 320 ntBASIC4.08□□□□□ -1.76
PCDHB1Q9Y5F3 LINC01208-202ENST00000434969 827 ntTSL 2 BASIC4.08□□□□□ -1.76
PCDHB1Q9Y5F3 LINC00630-205ENST00000440496 2101 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
PCDHB1Q9Y5F3 NEFMP1-201ENST00000443423 1006 ntBASIC4.08□□□□□ -1.76
PCDHB1Q9Y5F3 AC073342.1-202ENST00000446192 457 ntTSL 5 BASIC4.08□□□□□ -1.76
PCDHB1Q9Y5F3 AC020550.1-201ENST00000447385 163 ntBASIC4.08□□□□□ -1.76
PCDHB1Q9Y5F3 RPS4XP5-202ENST00000449995 1334 ntBASIC4.08□□□□□ -1.76
PCDHB1Q9Y5F3 LINC01005-202ENST00000451440 531 ntTSL 4 BASIC4.08□□□□□ -1.76
PCDHB1Q9Y5F3 ASNSP3-201ENST00000451989 1306 ntBASIC4.08□□□□□ -1.76
PCDHB1Q9Y5F3 MTND1P11-201ENST00000456661 876 ntBASIC4.08□□□□□ -1.76
PCDHB1Q9Y5F3 PMCHL2-203ENST00000457791 237 ntBASIC4.08□□□□□ -1.76
PCDHB1Q9Y5F3 SNRPFP3-201ENST00000457792 225 ntBASIC4.08□□□□□ -1.76
PCDHB1Q9Y5F3 SERPINI2-202ENST00000461846 1514 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
PCDHB1Q9Y5F3 AC025554.1-201ENST00000505641 188 ntBASIC4.08□□□□□ -1.76
PCDHB1Q9Y5F3 AC092436.1-201ENST00000506450 503 ntBASIC4.08□□□□□ -1.76
PCDHB1Q9Y5F3 AC104806.1-201ENST00000508720 308 ntBASIC4.08□□□□□ -1.76
PCDHB1Q9Y5F3 RNU6-1153P-201ENST00000516760 105 ntBASIC4.08□□□□□ -1.76
PCDHB1Q9Y5F3 IGKV2D-23-201ENST00000518179 286 ntBASIC4.08□□□□□ -1.76
PCDHB1Q9Y5F3 LINCR-0001-203ENST00000524047 545 ntTSL 4 BASIC4.08□□□□□ -1.76
PCDHB1Q9Y5F3 AP006587.4-201ENST00000526053 529 ntBASIC4.08□□□□□ -1.76
PCDHB1Q9Y5F3 RANP3-201ENST00000530970 276 ntBASIC4.08□□□□□ -1.76
PCDHB1Q9Y5F3 AC055720.1-201ENST00000539552 475 ntTSL 5 BASIC4.08□□□□□ -1.76
PCDHB1Q9Y5F3 AL352955.1-201ENST00000555490 332 ntTSL 3 BASIC4.08□□□□□ -1.76
PCDHB1Q9Y5F3 AL355836.1-201ENST00000555951 870 ntBASIC4.08□□□□□ -1.76
PCDHB1Q9Y5F3 AC129492.2-201ENST00000577807 517 ntTSL 3 BASIC4.08□□□□□ -1.76
PCDHB1Q9Y5F3 AC104662.1-201ENST00000604448 511 ntBASIC4.08□□□□□ -1.76
PCDHB1Q9Y5F3 AC015813.4-201ENST00000610469 179 ntBASIC4.08□□□□□ -1.76
PCDHB1Q9Y5F3 AL365204.3-201ENST00000612448 685 ntBASIC4.08□□□□□ -1.76
PCDHB1Q9Y5F3 MAGI2-AS3-224ENST00000619135 205 ntTSL 5 BASIC4.08□□□□□ -1.76
PCDHB1Q9Y5F3 CR392039.5-201ENST00000623201 510 ntBASIC4.08□□□□□ -1.76
PCDHB1Q9Y5F3 ZMYND11-217ENST00000627286 3914 ntTSL 5 BASIC4.08□□□□□ -1.76
PCDHB1Q9Y5F3 SPTY2D1-AS1-205ENST00000635674 450 ntAPPRIS ALT2 TSL 2 BASIC4.08□□□□□ -1.76
PCDHB1Q9Y5F3 AC092442.1-201ENST00000636216 138 ntAPPRIS P1 TSL 5 BASIC4.08□□□□□ -1.76
PCDHB1Q9Y5F3 N4BP2L2-201ENST00000267068 9427 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
PCDHB1Q9Y5F3 SCN3A-201ENST00000283254 9091 ntAPPRIS P3 TSL 1 (best) BASIC4.08□□□□□ -1.76
PCDHB1Q9Y5F3 PLCL1-203ENST00000437704 5979 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
PCDHB1Q9Y5F3 BIRC3-206ENST00000532808 4238 ntAPPRIS P1 TSL 5 BASIC4.07□□□□□ -1.76
PCDHB1Q9Y5F3 PRO1804-201ENST00000623780 2050 ntBASIC4.07□□□□□ -1.76
PCDHB1Q9Y5F3 RAPH1-203ENST00000374493 3909 ntAPPRIS ALT2 TSL 5 BASIC4.07□□□□□ -1.76
PCDHB1Q9Y5F3 GPR171-201ENST00000309180 1786 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
PCDHB1Q9Y5F3 PPP1R9A-208ENST00000456331 10090 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
PCDHB1Q9Y5F3 ADGRL3-215ENST00000512091 12636 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
PCDHB1Q9Y5F3 LINC00158-201ENST00000332587 1476 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
PCDHB1Q9Y5F3 CENPF-201ENST00000366955 10307 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
PCDHB1Q9Y5F3 SYTL2-213ENST00000525702 2727 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
PCDHB1Q9Y5F3 RFPL3S-202ENST00000382086 455 ntAPPRIS ALT2 TSL 2 BASIC4.07□□□□□ -1.76
PCDHB1Q9Y5F3 Y_RNA.576-201ENST00000384781 102 ntBASIC4.07□□□□□ -1.76
PCDHB1Q9Y5F3 AL606923.1-201ENST00000406616 190 ntBASIC4.07□□□□□ -1.76
PCDHB1Q9Y5F3 AL078645.1-201ENST00000414377 423 ntTSL 3 BASIC4.07□□□□□ -1.76
PCDHB1Q9Y5F3 ARL5AP1-201ENST00000418991 388 ntBASIC4.07□□□□□ -1.76
PCDHB1Q9Y5F3 AC006159.2-201ENST00000421965 692 ntTSL 2 BASIC4.07□□□□□ -1.76
PCDHB1Q9Y5F3 AC018630.2-202ENST00000422992 927 ntBASIC4.07□□□□□ -1.76
PCDHB1Q9Y5F3 AL500522.1-201ENST00000423667 318 ntTSL 3 BASIC4.07□□□□□ -1.76
PCDHB1Q9Y5F3 AC069285.2-201ENST00000440210 275 ntBASIC4.07□□□□□ -1.76
PCDHB1Q9Y5F3 AC006011.1-201ENST00000442758 349 ntBASIC4.07□□□□□ -1.76
PCDHB1Q9Y5F3 TRAPPC2P3-201ENST00000443200 321 ntBASIC4.07□□□□□ -1.76
PCDHB1Q9Y5F3 SFTA1P-203ENST00000446372 693 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
PCDHB1Q9Y5F3 IGKV1OR-3-201ENST00000446944 348 ntBASIC4.07□□□□□ -1.76
PCDHB1Q9Y5F3 SPIN4-AS1-201ENST00000451979 426 ntTSL 2 BASIC4.07□□□□□ -1.76
PCDHB1Q9Y5F3 MTND3P16-201ENST00000452205 344 ntBASIC4.07□□□□□ -1.76
PCDHB1Q9Y5F3 LINC00571-203ENST00000454060 525 ntTSL 3 BASIC4.07□□□□□ -1.76
PCDHB1Q9Y5F3 RPL23AP31-201ENST00000456160 467 ntBASIC4.07□□□□□ -1.76
PCDHB1Q9Y5F3 AC121764.1-201ENST00000472238 563 ntTSL 4 BASIC4.07□□□□□ -1.76
PCDHB1Q9Y5F3 AC108860.1-201ENST00000484521 383 ntBASIC4.07□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 126.8 ms