Protein–RNA interactions for Protein: Q9Y3P4

RHBDD3, Rhomboid domain-containing protein 3, humanhuman

Predictions only

Length 386 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDD3Q9Y3P4 TXNP7-201ENST00000406296 293 ntBASIC2.24□□□□□ -2.05
RHBDD3Q9Y3P4 RNU2-49P-201ENST00000410666 184 ntBASIC2.24□□□□□ -2.05
RHBDD3Q9Y3P4 RNU6-516P-201ENST00000411381 104 ntBASIC2.24□□□□□ -2.05
RHBDD3Q9Y3P4 MTCYBP38-201ENST00000417160 1123 ntBASIC2.24□□□□□ -2.05
RHBDD3Q9Y3P4 MTND4P3-201ENST00000417829 541 ntBASIC2.24□□□□□ -2.05
RHBDD3Q9Y3P4 NBDY-202ENST00000423617 543 ntAPPRIS P1 TSL 2 BASIC2.24□□□□□ -2.05
RHBDD3Q9Y3P4 AL109947.1-201ENST00000423747 382 ntTSL 2 BASIC2.24□□□□□ -2.05
RHBDD3Q9Y3P4 AL356277.3-201ENST00000432484 618 ntTSL 3 BASIC2.24□□□□□ -2.05
RHBDD3Q9Y3P4 AL353680.1-201ENST00000433788 337 ntTSL 3 BASIC2.24□□□□□ -2.05
RHBDD3Q9Y3P4 AC003001.1-201ENST00000443247 1135 ntTSL 5 BASIC2.24□□□□□ -2.05
RHBDD3Q9Y3P4 LINC00529-201ENST00000443854 241 ntTSL 2 BASIC2.24□□□□□ -2.05
RHBDD3Q9Y3P4 AL118523.1-201ENST00000444436 480 ntTSL 3 BASIC2.24□□□□□ -2.05
RHBDD3Q9Y3P4 NDUFAF4P2-201ENST00000445374 520 ntBASIC2.24□□□□□ -2.05
RHBDD3Q9Y3P4 AC016903.2-201ENST00000456384 326 ntTSL 3 BASIC2.24□□□□□ -2.05
RHBDD3Q9Y3P4 AC026801.1-201ENST00000497178 464 ntBASIC2.24□□□□□ -2.05
RHBDD3Q9Y3P4 AC098591.2-201ENST00000510152 315 ntBASIC2.24□□□□□ -2.05
RHBDD3Q9Y3P4 HMGB3P3-201ENST00000510526 400 ntBASIC2.24□□□□□ -2.05
RHBDD3Q9Y3P4 AC104827.1-202ENST00000511917 1049 ntTSL 1 (best) BASIC2.24□□□□□ -2.05
RHBDD3Q9Y3P4 AC103957.1-201ENST00000517681 503 ntTSL 3 BASIC2.24□□□□□ -2.05
RHBDD3Q9Y3P4 AC096558.2-201ENST00000546678 506 ntTSL 3 BASIC2.24□□□□□ -2.05
RHBDD3Q9Y3P4 PPFIA2-AS1-205ENST00000550938 790 ntTSL 3 BASIC2.24□□□□□ -2.05
RHBDD3Q9Y3P4 AC023825.1-201ENST00000566704 1030 ntBASIC2.24□□□□□ -2.05
RHBDD3Q9Y3P4 AC007151.1-201ENST00000572774 483 ntBASIC2.24□□□□□ -2.05
RHBDD3Q9Y3P4 OR4K7P-201ENST00000580232 945 ntBASIC2.24□□□□□ -2.05
RHBDD3Q9Y3P4 AC008507.2-201ENST00000588402 1176 ntBASIC2.24□□□□□ -2.05
RHBDD3Q9Y3P4 MTND4LP5-201ENST00000605152 292 ntBASIC2.24□□□□□ -2.05
RHBDD3Q9Y3P4 AC007619.2-201ENST00000605743 379 ntBASIC2.24□□□□□ -2.05
RHBDD3Q9Y3P4 OR1S1-201ENST00000624470 978 ntBASIC2.24□□□□□ -2.05
RHBDD3Q9Y3P4 AL358154.1-201ENST00000627075 444 ntTSL 3 BASIC2.24□□□□□ -2.05
RHBDD3Q9Y3P4 GMFB-210ENST00000628554 639 ntTSL 4 BASIC2.24□□□□□ -2.05
RHBDD3Q9Y3P4 AC004520.1-201ENST00000608362 1413 ntBASIC2.24□□□□□ -2.05
RHBDD3Q9Y3P4 OFD1P6Y-202ENST00000451061 2724 ntBASIC2.24□□□□□ -2.05
RHBDD3Q9Y3P4 PMCH-201ENST00000329406 766 ntAPPRIS P1 TSL 1 (best) BASIC2.23□□□□□ -2.05
RHBDD3Q9Y3P4 SNORA63.3-201ENST00000362682 132 ntBASIC2.23□□□□□ -2.05
RHBDD3Q9Y3P4 CRLS1-202ENST00000378868 994 ntTSL 5 BASIC2.23□□□□□ -2.05
RHBDD3Q9Y3P4 Y_RNA.548-201ENST00000384656 105 ntBASIC2.23□□□□□ -2.05
RHBDD3Q9Y3P4 Y_RNA.578-201ENST00000390903 88 ntBASIC2.23□□□□□ -2.05
RHBDD3Q9Y3P4 RNU6-220P-201ENST00000390919 107 ntBASIC2.23□□□□□ -2.05
RHBDD3Q9Y3P4 RNU6-952P-201ENST00000391164 108 ntBASIC2.23□□□□□ -2.05
RHBDD3Q9Y3P4 AF274854.1-201ENST00000413236 615 ntBASIC2.23□□□□□ -2.05
RHBDD3Q9Y3P4 RPLP0P7-201ENST00000416050 667 ntBASIC2.23□□□□□ -2.05
RHBDD3Q9Y3P4 BPY2DP-201ENST00000422208 265 ntBASIC2.23□□□□□ -2.05
RHBDD3Q9Y3P4 LINC01040-201ENST00000425048 666 ntTSL 2 BASIC2.23□□□□□ -2.05
RHBDD3Q9Y3P4 UBE2E2-AS1-202ENST00000430018 499 ntTSL 2 BASIC2.23□□□□□ -2.05
RHBDD3Q9Y3P4 OR5H14-201ENST00000437310 1080 ntAPPRIS P1 BASIC2.23□□□□□ -2.05
RHBDD3Q9Y3P4 AC004691.1-201ENST00000440376 547 ntTSL 3 BASIC2.23□□□□□ -2.05
RHBDD3Q9Y3P4 AC025750.2-201ENST00000442609 450 ntBASIC2.23□□□□□ -2.05
RHBDD3Q9Y3P4 AC104688.1-201ENST00000447158 419 ntTSL 3 BASIC2.23□□□□□ -2.05
RHBDD3Q9Y3P4 GAS5-221ENST00000450589 632 ntTSL 1 (best) BASIC2.23□□□□□ -2.05
RHBDD3Q9Y3P4 AC073326.1-201ENST00000451832 557 ntTSL 3 BASIC2.23□□□□□ -2.05
RHBDD3Q9Y3P4 BX322784.1-201ENST00000455793 1077 ntBASIC2.23□□□□□ -2.05
RHBDD3Q9Y3P4 AC013267.1-201ENST00000458227 267 ntBASIC2.23□□□□□ -2.05
RHBDD3Q9Y3P4 RPL30P9-201ENST00000465586 330 ntBASIC2.23□□□□□ -2.05
RHBDD3Q9Y3P4 RPS3AP14-201ENST00000483907 780 ntBASIC2.23□□□□□ -2.05
RHBDD3Q9Y3P4 AC090857.2-201ENST00000526362 723 ntTSL 2 BASIC2.23□□□□□ -2.05
RHBDD3Q9Y3P4 AP003497.1-201ENST00000528472 562 ntBASIC2.23□□□□□ -2.05
RHBDD3Q9Y3P4 AC118942.1-201ENST00000529674 1035 ntBASIC2.23□□□□□ -2.05
RHBDD3Q9Y3P4 AP003168.1-201ENST00000530091 307 ntBASIC2.23□□□□□ -2.05
RHBDD3Q9Y3P4 AL136146.2-201ENST00000534594 494 ntTSL 2 BASIC2.23□□□□□ -2.05
RHBDD3Q9Y3P4 PCED1B-AS1-208ENST00000551898 359 ntTSL 3 BASIC2.23□□□□□ -2.05
RHBDD3Q9Y3P4 LINC00871-202ENST00000556071 554 ntTSL 3 BASIC2.23□□□□□ -2.05
RHBDD3Q9Y3P4 GTF3AP2-201ENST00000557014 266 ntBASIC2.23□□□□□ -2.05
RHBDD3Q9Y3P4 AC060766.3-201ENST00000591442 263 ntBASIC2.23□□□□□ -2.05
RHBDD3Q9Y3P4 BNIP3P22-201ENST00000593399 556 ntBASIC2.23□□□□□ -2.05
RHBDD3Q9Y3P4 VN1R90P-201ENST00000595717 726 ntBASIC2.23□□□□□ -2.05
RHBDD3Q9Y3P4 AL033523.1-201ENST00000605153 153 ntBASIC2.23□□□□□ -2.05
RHBDD3Q9Y3P4 AC007349.4-201ENST00000608114 532 ntBASIC2.23□□□□□ -2.05
RHBDD3Q9Y3P4 SDR42E1P2-201ENST00000614861 481 ntBASIC2.23□□□□□ -2.05
RHBDD3Q9Y3P4 AC006386.2-201ENST00000624491 75 ntBASIC2.23□□□□□ -2.05
RHBDD3Q9Y3P4 AC012005.1-201ENST00000624575 75 ntBASIC2.23□□□□□ -2.05
RHBDD3Q9Y3P4 AC019226.1-201ENST00000625666 515 ntBASIC2.23□□□□□ -2.05
RHBDD3Q9Y3P4 WARS-244ENST00000627608 123 ntTSL 5 BASIC2.23□□□□□ -2.05
RHBDD3Q9Y3P4 OLFM3-206ENST00000536598 2801 ntTSL 5 BASIC2.23□□□□□ -2.05
RHBDD3Q9Y3P4 PLS1-201ENST00000337777 3755 ntAPPRIS P1 TSL 1 (best) BASIC2.23□□□□□ -2.05
RHBDD3Q9Y3P4 AC010889.1-201ENST00000566193 2666 ntBASIC2.23□□□□□ -2.05
RHBDD3Q9Y3P4 ELF2P3-201ENST00000445099 1506 ntBASIC2.22□□□□□ -2.05
RHBDD3Q9Y3P4 AL390862.1-201ENST00000635467 1469 ntBASIC2.22□□□□□ -2.05
RHBDD3Q9Y3P4 DPY19L2P1-203ENST00000458672 3347 ntTSL 1 (best) BASIC2.22□□□□□ -2.05
RHBDD3Q9Y3P4 TFPI-202ENST00000339091 1088 ntTSL 1 (best) BASIC2.22□□□□□ -2.05
RHBDD3Q9Y3P4 RNU6-1207P-201ENST00000384343 107 ntBASIC2.22□□□□□ -2.05
RHBDD3Q9Y3P4 SPATA17-AS1-201ENST00000415765 420 ntTSL 5 BASIC2.22□□□□□ -2.05
RHBDD3Q9Y3P4 COTL1P1-201ENST00000422309 375 ntBASIC2.22□□□□□ -2.05
RHBDD3Q9Y3P4 LINC01037-201ENST00000427337 424 ntTSL 5 BASIC2.22□□□□□ -2.05
RHBDD3Q9Y3P4 AL360169.1-201ENST00000435116 143 ntTSL 5 BASIC2.22□□□□□ -2.05
RHBDD3Q9Y3P4 AL451164.2-201ENST00000445932 597 ntTSL 2 BASIC2.22□□□□□ -2.05
RHBDD3Q9Y3P4 AC092422.1-201ENST00000455576 584 ntTSL 4 BASIC2.22□□□□□ -2.05
RHBDD3Q9Y3P4 RPL12P25-201ENST00000455592 494 ntBASIC2.22□□□□□ -2.05
RHBDD3Q9Y3P4 ANKRD26P4-201ENST00000455755 950 ntBASIC2.22□□□□□ -2.05
RHBDD3Q9Y3P4 SNORD109B-201ENST00000458961 67 ntBASIC2.22□□□□□ -2.05
RHBDD3Q9Y3P4 SNORD109A-201ENST00000459128 67 ntBASIC2.22□□□□□ -2.05
RHBDD3Q9Y3P4 FSBP-201ENST00000481490 1158 ntTSL 1 (best) BASIC2.22□□□□□ -2.05
RHBDD3Q9Y3P4 AC114912.1-201ENST00000503394 546 ntTSL 3 BASIC2.22□□□□□ -2.05
RHBDD3Q9Y3P4 AC097462.2-201ENST00000504623 481 ntBASIC2.22□□□□□ -2.05
RHBDD3Q9Y3P4 AC034159.1-201ENST00000513885 583 ntBASIC2.22□□□□□ -2.05
RHBDD3Q9Y3P4 AC110760.3-202ENST00000515177 371 ntBASIC2.22□□□□□ -2.05
RHBDD3Q9Y3P4 AC095057.2-201ENST00000515422 553 ntTSL 4 BASIC2.22□□□□□ -2.05
RHBDD3Q9Y3P4 AC084116.3-201ENST00000519123 429 ntTSL 3 BASIC2.22□□□□□ -2.05
RHBDD3Q9Y3P4 CKS1BP7-201ENST00000522230 235 ntBASIC2.22□□□□□ -2.05
RHBDD3Q9Y3P4 LINC00301-204ENST00000532591 470 ntTSL 2 BASIC2.22□□□□□ -2.05
RHBDD3Q9Y3P4 PLCZ1-203ENST00000534932 525 ntTSL 4 BASIC2.22□□□□□ -2.05
Retrieved 100 of 98,524 protein–RNA pairs in 80.4 ms