Protein–RNA interactions for Protein: Q9Y3I0

RTCB, tRNA-splicing ligase RtcB homolog, humanhuman

Known RBP Predictions only

Length 505 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTCBQ9Y3I0 AL513365.2-201ENST00000423060 529 ntTSL 2 BASIC5.54□□□□□ -1.52
RTCBQ9Y3I0 RPL7P37-201ENST00000425095 738 ntBASIC5.54□□□□□ -1.52
RTCBQ9Y3I0 AL157831.1-201ENST00000426134 473 ntBASIC5.54□□□□□ -1.52
RTCBQ9Y3I0 FABP5P13-201ENST00000452144 328 ntBASIC5.54□□□□□ -1.52
RTCBQ9Y3I0 AP001086.1-201ENST00000494882 321 ntBASIC5.54□□□□□ -1.52
RTCBQ9Y3I0 AC108210.1-201ENST00000510772 825 ntTSL 3 BASIC5.54□□□□□ -1.52
RTCBQ9Y3I0 IL7R-208ENST00000511982 612 ntTSL 2 BASIC5.54□□□□□ -1.52
RTCBQ9Y3I0 AC099522.1-202ENST00000514718 367 ntBASIC5.54□□□□□ -1.52
RTCBQ9Y3I0 Y_RNA.668-201ENST00000516233 93 ntBASIC5.54□□□□□ -1.52
RTCBQ9Y3I0 RNU6-388P-201ENST00000517012 105 ntBASIC5.54□□□□□ -1.52
RTCBQ9Y3I0 RNU6-389P-201ENST00000517048 105 ntBASIC5.54□□□□□ -1.52
RTCBQ9Y3I0 AP002768.1-201ENST00000526741 320 ntTSL 3 BASIC5.54□□□□□ -1.52
RTCBQ9Y3I0 STX3-204ENST00000530221 534 ntTSL 5 BASIC5.54□□□□□ -1.52
RTCBQ9Y3I0 SOX5-AS1-201ENST00000539583 573 ntTSL 4 BASIC5.54□□□□□ -1.52
RTCBQ9Y3I0 AL359237.1-202ENST00000556168 487 ntTSL 5 BASIC5.54□□□□□ -1.52
RTCBQ9Y3I0 RPL23AP84-201ENST00000571193 464 ntBASIC5.54□□□□□ -1.52
RTCBQ9Y3I0 ZNF345-216ENST00000640438 963 ntTSL 5 BASIC5.54□□□□□ -1.52
RTCBQ9Y3I0 PCDH11X-207ENST00000406881 4156 ntAPPRIS ALT2 TSL 1 (best) BASIC5.54□□□□□ -1.52
RTCBQ9Y3I0 PTPN12-206ENST00000435495 2526 ntTSL 2 BASIC5.54□□□□□ -1.52
RTCBQ9Y3I0 AL133243.3-201ENST00000617415 3004 ntBASIC5.54□□□□□ -1.52
RTCBQ9Y3I0 HMBOX1-202ENST00000355231 1694 ntTSL 5 BASIC5.53□□□□□ -1.52
RTCBQ9Y3I0 VCAM1-203ENST00000370115 2475 ntTSL 5 BASIC5.53□□□□□ -1.52
RTCBQ9Y3I0 AL161668.1-201ENST00000320322 358 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
RTCBQ9Y3I0 Y_RNA.493-201ENST00000384422 102 ntBASIC5.53□□□□□ -1.52
RTCBQ9Y3I0 RNU6-1109P-201ENST00000391187 107 ntBASIC5.53□□□□□ -1.52
RTCBQ9Y3I0 RNU6ATAC-201ENST00000408749 126 ntBASIC5.53□□□□□ -1.52
RTCBQ9Y3I0 Z99755.1-201ENST00000414048 380 ntBASIC5.53□□□□□ -1.52
RTCBQ9Y3I0 RPL21P109-201ENST00000422213 475 ntBASIC5.53□□□□□ -1.52
RTCBQ9Y3I0 USMG5P1-201ENST00000425964 177 ntBASIC5.53□□□□□ -1.52
RTCBQ9Y3I0 AL669831.1-202ENST00000428504 417 ntBASIC5.53□□□□□ -1.52
RTCBQ9Y3I0 PLCE1-AS2-203ENST00000433038 396 ntTSL 2 BASIC5.53□□□□□ -1.52
RTCBQ9Y3I0 IGKV3D-7-201ENST00000443397 384 ntAPPRIS P1 BASIC5.53□□□□□ -1.52
RTCBQ9Y3I0 TH2LCRR-203ENST00000457489 439 ntTSL 3 BASIC5.53□□□□□ -1.52
RTCBQ9Y3I0 snoU109.4-201ENST00000458953 143 ntBASIC5.53□□□□□ -1.52
RTCBQ9Y3I0 AC123768.1-201ENST00000486285 432 ntTSL 3 BASIC5.53□□□□□ -1.52
RTCBQ9Y3I0 AC104564.1-201ENST00000493028 407 ntBASIC5.53□□□□□ -1.52
RTCBQ9Y3I0 AC026801.1-201ENST00000497178 464 ntBASIC5.53□□□□□ -1.52
RTCBQ9Y3I0 LINC01846-201ENST00000505908 651 ntTSL 5 BASIC5.53□□□□□ -1.52
RTCBQ9Y3I0 AC025741.1-201ENST00000506100 544 ntTSL 4 BASIC5.53□□□□□ -1.52
RTCBQ9Y3I0 AL592156.1-201ENST00000508758 304 ntBASIC5.53□□□□□ -1.52
RTCBQ9Y3I0 RNU2-69P-201ENST00000516061 100 ntBASIC5.53□□□□□ -1.52
RTCBQ9Y3I0 RNU6-323P-201ENST00000521915 107 ntBASIC5.53□□□□□ -1.52
RTCBQ9Y3I0 AC079098.1-202ENST00000523150 573 ntTSL 5 BASIC5.53□□□□□ -1.52
RTCBQ9Y3I0 AC015912.2-201ENST00000571053 181 ntBASIC5.53□□□□□ -1.52
RTCBQ9Y3I0 AC005357.1-201ENST00000588399 301 ntBASIC5.53□□□□□ -1.52
RTCBQ9Y3I0 AL109918.3-201ENST00000603072 338 ntBASIC5.53□□□□□ -1.52
RTCBQ9Y3I0 AL356056.1-205ENST00000608904 651 ntTSL 5 BASIC5.53□□□□□ -1.52
RTCBQ9Y3I0 AC062037.2-201ENST00000610137 73 ntBASIC5.53□□□□□ -1.52
RTCBQ9Y3I0 AC099669.2-201ENST00000616549 437 ntBASIC5.53□□□□□ -1.52
RTCBQ9Y3I0 LGALS13-204ENST00000621475 494 ntAPPRIS ALT2 TSL 5 BASIC5.53□□□□□ -1.52
RTCBQ9Y3I0 AC138965.3-201ENST00000623875 498 ntBASIC5.53□□□□□ -1.52
RTCBQ9Y3I0 SMG1P4-204ENST00000523028 4131 ntBASIC5.53□□□□□ -1.52
RTCBQ9Y3I0 XKR4-201ENST00000327381 19880 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
RTCBQ9Y3I0 CFAP70-201ENST00000310715 3703 ntAPPRIS P1 TSL 5 BASIC5.53□□□□□ -1.52
RTCBQ9Y3I0 MYBPC1-202ENST00000361685 3871 ntAPPRIS ALT2 TSL 1 (best) BASIC5.53□□□□□ -1.52
RTCBQ9Y3I0 SMAD4-202ENST00000398417 8495 ntAPPRIS P1 TSL 5 BASIC5.53□□□□□ -1.52
RTCBQ9Y3I0 SPINK5-201ENST00000256084 3535 ntAPPRIS P3 TSL 1 (best) BASIC5.53□□□□□ -1.52
RTCBQ9Y3I0 CDK15-204ENST00000450471 3659 ntAPPRIS ALT1 TSL 1 (best) BASIC5.53□□□□□ -1.52
RTCBQ9Y3I0 AL049830.3-201ENST00000555108 1991 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
RTCBQ9Y3I0 OR6C2-202ENST00000641202 2105 ntAPPRIS P1 BASIC5.53□□□□□ -1.52
RTCBQ9Y3I0 THAP12P5-201ENST00000405864 2275 ntBASIC5.53□□□□□ -1.52
RTCBQ9Y3I0 UGT2A1-203ENST00000503640 2595 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
RTCBQ9Y3I0 SLC24A2-202ENST00000341998 10749 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
RTCBQ9Y3I0 MOXD1-201ENST00000336749 2950 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
RTCBQ9Y3I0 OR2AT4-203ENST00000641541 8795 ntAPPRIS P1 BASIC5.52□□□□□ -1.53
RTCBQ9Y3I0 CRISP1-204ENST00000507853 1793 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
RTCBQ9Y3I0 PCDH15-209ENST00000395433 6942 ntTSL 5 BASIC5.52□□□□□ -1.53
RTCBQ9Y3I0 AC007529.1-201ENST00000418574 2178 ntBASIC5.52□□□□□ -1.53
RTCBQ9Y3I0 SGO1-AS1-203ENST00000455626 2041 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
RTCBQ9Y3I0 PUS7L-203ENST00000431332 1873 ntTSL 2 BASIC5.52□□□□□ -1.53
RTCBQ9Y3I0 AC074029.4-201ENST00000624796 1859 ntBASIC5.52□□□□□ -1.53
RTCBQ9Y3I0 DPP10-204ENST00000409163 3883 ntAPPRIS ALT2 TSL 2 BASIC5.52□□□□□ -1.53
RTCBQ9Y3I0 HNMT-202ENST00000280097 3295 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
RTCBQ9Y3I0 ZNF660-201ENST00000322734 5834 ntAPPRIS P1 TSL 2 BASIC5.52□□□□□ -1.53
RTCBQ9Y3I0 MIR208A-201ENST00000362287 71 ntBASIC5.52□□□□□ -1.53
RTCBQ9Y3I0 SNORA71.3-201ENST00000362582 128 ntBASIC5.52□□□□□ -1.53
RTCBQ9Y3I0 Y_RNA.257-201ENST00000364596 102 ntBASIC5.52□□□□□ -1.53
RTCBQ9Y3I0 SNORA11.1-201ENST00000408133 129 ntBASIC5.52□□□□□ -1.53
RTCBQ9Y3I0 RNU6-101P-201ENST00000410323 104 ntBASIC5.52□□□□□ -1.53
RTCBQ9Y3I0 RPS20P14-201ENST00000412545 360 ntBASIC5.52□□□□□ -1.53
RTCBQ9Y3I0 AL592078.1-201ENST00000421866 321 ntTSL 3 BASIC5.52□□□□□ -1.53
RTCBQ9Y3I0 PLCB1-IT1-201ENST00000441231 373 ntTSL 3 BASIC5.52□□□□□ -1.53
RTCBQ9Y3I0 MRPL48P1-201ENST00000445390 636 ntBASIC5.52□□□□□ -1.53
RTCBQ9Y3I0 AC105398.1-201ENST00000446073 402 ntTSL 5 BASIC5.52□□□□□ -1.53
RTCBQ9Y3I0 HMGB3P30-201ENST00000457863 606 ntBASIC5.52□□□□□ -1.53
RTCBQ9Y3I0 AC022493.2-201ENST00000506122 481 ntBASIC5.52□□□□□ -1.53
RTCBQ9Y3I0 AC107222.1-201ENST00000510899 637 ntBASIC5.52□□□□□ -1.53
RTCBQ9Y3I0 AC114316.1-201ENST00000511323 278 ntTSL 5 BASIC5.52□□□□□ -1.53
RTCBQ9Y3I0 AC079160.1-201ENST00000513489 739 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
RTCBQ9Y3I0 MYBPC1-208ENST00000547405 3834 ntAPPRIS ALT2 TSL 1 (best) BASIC5.52□□□□□ -1.53
RTCBQ9Y3I0 AC092447.9-201ENST00000603395 144 ntBASIC5.52□□□□□ -1.53
RTCBQ9Y3I0 AC006329.2-201ENST00000611491 394 ntBASIC5.52□□□□□ -1.53
RTCBQ9Y3I0 TUG1_2.1-201ENST00000614234 87 ntBASIC5.52□□□□□ -1.53
RTCBQ9Y3I0 AL021997.2-201ENST00000615674 271 ntBASIC5.52□□□□□ -1.53
RTCBQ9Y3I0 AC097478.4-201ENST00000615968 522 ntTSL 5 BASIC5.52□□□□□ -1.53
RTCBQ9Y3I0 U2.1-201ENST00000618978 145 ntBASIC5.52□□□□□ -1.53
RTCBQ9Y3I0 AP001005.3-201ENST00000622049 129 ntBASIC5.52□□□□□ -1.53
RTCBQ9Y3I0 AC110801.1-201ENST00000623590 212 ntBASIC5.52□□□□□ -1.53
RTCBQ9Y3I0 MPP6-209ENST00000625307 126 ntTSL 5 BASIC5.52□□□□□ -1.53
RTCBQ9Y3I0 ZNF560-201ENST00000301480 2654 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 100.5 ms