Protein–RNA interactions for Protein: Q9UPM8

AP4E1, AP-4 complex subunit epsilon-1, humanhuman

Predictions only

Length 1,137 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP4E1Q9UPM8 TRAPPC2P10-201ENST00000415662 323 ntBASIC4.88□□□□□ -1.63
AP4E1Q9UPM8 BX510359.2-201ENST00000417920 305 ntBASIC4.88□□□□□ -1.63
AP4E1Q9UPM8 AL391219.1-201ENST00000422570 483 ntBASIC4.88□□□□□ -1.63
AP4E1Q9UPM8 RBMY1KP-201ENST00000423480 476 ntBASIC4.88□□□□□ -1.63
AP4E1Q9UPM8 RPL7P2-201ENST00000427639 268 ntBASIC4.88□□□□□ -1.63
AP4E1Q9UPM8 RPS27P18-201ENST00000431701 247 ntBASIC4.88□□□□□ -1.63
AP4E1Q9UPM8 RPL7L1P1-201ENST00000448259 785 ntBASIC4.88□□□□□ -1.63
AP4E1Q9UPM8 RPL17P19-201ENST00000489069 552 ntBASIC4.88□□□□□ -1.63
AP4E1Q9UPM8 AC093852.1-201ENST00000503587 266 ntBASIC4.88□□□□□ -1.63
AP4E1Q9UPM8 AC022447.4-201ENST00000504053 364 ntBASIC4.88□□□□□ -1.63
AP4E1Q9UPM8 AC010255.3-204ENST00000514637 454 ntTSL 2 BASIC4.88□□□□□ -1.63
AP4E1Q9UPM8 HIGD1AP3-201ENST00000515857 278 ntBASIC4.88□□□□□ -1.63
AP4E1Q9UPM8 AC007991.1-201ENST00000522680 631 ntBASIC4.88□□□□□ -1.63
AP4E1Q9UPM8 AC002428.2-201ENST00000522973 414 ntTSL 3 BASIC4.88□□□□□ -1.63
AP4E1Q9UPM8 AC104002.2-201ENST00000553919 318 ntTSL 5 BASIC4.88□□□□□ -1.63
AP4E1Q9UPM8 AC084783.1-201ENST00000565846 910 ntBASIC4.88□□□□□ -1.63
AP4E1Q9UPM8 AL355812.1-201ENST00000603215 216 ntBASIC4.88□□□□□ -1.63
AP4E1Q9UPM8 RAC1P9-201ENST00000604990 392 ntBASIC4.88□□□□□ -1.63
AP4E1Q9UPM8 AL391358.1-201ENST00000605342 190 ntBASIC4.88□□□□□ -1.63
AP4E1Q9UPM8 CASP1-217ENST00000640184 327 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
AP4E1Q9UPM8 SDAD1P1-202ENST00000524156 2051 ntBASIC4.88□□□□□ -1.63
AP4E1Q9UPM8 AC083843.3-201ENST00000623679 2186 ntBASIC4.88□□□□□ -1.63
AP4E1Q9UPM8 UBA6-AS1-203ENST00000500538 3352 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
AP4E1Q9UPM8 ABCA12-201ENST00000272895 9100 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
AP4E1Q9UPM8 POSTN-210ENST00000541481 3113 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
AP4E1Q9UPM8 OR2L3-202ENST00000641161 2830 ntAPPRIS P1 BASIC4.87□□□□□ -1.63
AP4E1Q9UPM8 OR2L3-203ENST00000641649 2846 ntAPPRIS P1 BASIC4.87□□□□□ -1.63
AP4E1Q9UPM8 ZNF28-204ENST00000457749 4556 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
AP4E1Q9UPM8 RAP1B-201ENST00000250559 13438 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
AP4E1Q9UPM8 PCDH15-214ENST00000395446 3948 ntTSL 5 BASIC4.87□□□□□ -1.63
AP4E1Q9UPM8 FOXP2-226ENST00000635638 2598 ntAPPRIS ALT1 TSL 5 BASIC4.87□□□□□ -1.63
AP4E1Q9UPM8 AC092821.1-204ENST00000518709 3552 ntTSL 5 BASIC4.87□□□□□ -1.63
AP4E1Q9UPM8 GABRG2-214ENST00000639111 11735 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
AP4E1Q9UPM8 D21S2088E-201ENST00000262354 1725 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
AP4E1Q9UPM8 ANXA1-202ENST00000376911 2209 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
AP4E1Q9UPM8 ROBO2-213ENST00000614793 7662 ntTSL 5 BASIC4.87□□□□□ -1.63
AP4E1Q9UPM8 AC006148.1-201ENST00000484322 4310 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
AP4E1Q9UPM8 Y_RNA.376-201ENST00000365638 108 ntBASIC4.87□□□□□ -1.63
AP4E1Q9UPM8 MIR135A2-201ENST00000384854 100 ntBASIC4.87□□□□□ -1.63
AP4E1Q9UPM8 AL590704.1-201ENST00000402856 794 ntBASIC4.87□□□□□ -1.63
AP4E1Q9UPM8 RNU6-174P-201ENST00000410406 106 ntBASIC4.87□□□□□ -1.63
AP4E1Q9UPM8 RN7SKP106-201ENST00000410832 272 ntBASIC4.87□□□□□ -1.63
AP4E1Q9UPM8 AC099677.1-201ENST00000420575 175 ntBASIC4.87□□□□□ -1.63
AP4E1Q9UPM8 ELOCP20-201ENST00000422460 345 ntBASIC4.87□□□□□ -1.63
AP4E1Q9UPM8 BX276092.3-201ENST00000424182 230 ntBASIC4.87□□□□□ -1.63
AP4E1Q9UPM8 AL590762.4-201ENST00000425885 253 ntBASIC4.87□□□□□ -1.63
AP4E1Q9UPM8 LAMTOR3P1-201ENST00000428620 370 ntBASIC4.87□□□□□ -1.63
AP4E1Q9UPM8 AC005154.2-201ENST00000438110 379 ntBASIC4.87□□□□□ -1.63
AP4E1Q9UPM8 AL050349.1-201ENST00000441029 401 ntTSL 2 BASIC4.87□□□□□ -1.63
AP4E1Q9UPM8 AL365271.1-201ENST00000448909 603 ntTSL 3 BASIC4.87□□□□□ -1.63
AP4E1Q9UPM8 AC117462.1-201ENST00000461186 554 ntTSL 4 BASIC4.87□□□□□ -1.63
AP4E1Q9UPM8 FTH1P2-201ENST00000466086 412 ntBASIC4.87□□□□□ -1.63
AP4E1Q9UPM8 AC108751.2-201ENST00000469993 231 ntBASIC4.87□□□□□ -1.63
AP4E1Q9UPM8 AC108860.1-201ENST00000484521 383 ntBASIC4.87□□□□□ -1.63
AP4E1Q9UPM8 AC011005.2-201ENST00000487324 359 ntBASIC4.87□□□□□ -1.63
AP4E1Q9UPM8 AC083829.1-201ENST00000503756 657 ntBASIC4.87□□□□□ -1.63
AP4E1Q9UPM8 RN7SKP46-201ENST00000515942 234 ntBASIC4.87□□□□□ -1.63
AP4E1Q9UPM8 RNU6-406P-201ENST00000516470 107 ntBASIC4.87□□□□□ -1.63
AP4E1Q9UPM8 SKP1-203ENST00000517625 876 ntAPPRIS P4 TSL 3 BASIC4.87□□□□□ -1.63
AP4E1Q9UPM8 AC100807.1-201ENST00000517640 552 ntTSL 5 BASIC4.87□□□□□ -1.63
AP4E1Q9UPM8 AC009435.1-201ENST00000519555 574 ntTSL 4 BASIC4.87□□□□□ -1.63
AP4E1Q9UPM8 AC087664.2-201ENST00000522898 551 ntTSL 4 BASIC4.87□□□□□ -1.63
AP4E1Q9UPM8 AC009643.1-201ENST00000532030 391 ntBASIC4.87□□□□□ -1.63
AP4E1Q9UPM8 AC068789.1-201ENST00000547942 577 ntTSL 2 BASIC4.87□□□□□ -1.63
AP4E1Q9UPM8 AC112481.1-201ENST00000549669 901 ntTSL 2 BASIC4.87□□□□□ -1.63
AP4E1Q9UPM8 AL110118.1-201ENST00000553543 400 ntBASIC4.87□□□□□ -1.63
AP4E1Q9UPM8 AC105129.1-201ENST00000560250 297 ntBASIC4.87□□□□□ -1.63
AP4E1Q9UPM8 LINC00649-204ENST00000593977 640 ntTSL 5 BASIC4.87□□□□□ -1.63
AP4E1Q9UPM8 MTND4LP5-201ENST00000605152 292 ntBASIC4.87□□□□□ -1.63
AP4E1Q9UPM8 AC105265.4-201ENST00000618391 306 ntTSL 5 BASIC4.87□□□□□ -1.63
AP4E1Q9UPM8 RAG2-201ENST00000311485 2388 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
AP4E1Q9UPM8 MAPK10-349ENST00000641767 3661 ntBASIC4.87□□□□□ -1.63
AP4E1Q9UPM8 XIRP2-207ENST00000628543 12182 ntTSL 5 BASIC4.87□□□□□ -1.63
AP4E1Q9UPM8 OR56A1-202ENST00000641423 6096 ntAPPRIS P1 BASIC4.86□□□□□ -1.63
AP4E1Q9UPM8 RNF111-212ENST00000561186 4536 ntTSL 2 BASIC4.86□□□□□ -1.63
AP4E1Q9UPM8 TRIQK-211ENST00000520430 1829 ntAPPRIS P1 TSL 2 BASIC4.86□□□□□ -1.63
AP4E1Q9UPM8 ZNF72P-201ENST00000425869 1908 ntBASIC4.86□□□□□ -1.63
AP4E1Q9UPM8 LINC02389-201ENST00000535058 3546 ntTSL 2 BASIC4.86□□□□□ -1.63
AP4E1Q9UPM8 RNU6-596P-201ENST00000365395 98 ntBASIC4.86□□□□□ -1.63
AP4E1Q9UPM8 Y_RNA.480-201ENST00000384364 102 ntBASIC4.86□□□□□ -1.63
AP4E1Q9UPM8 MT-TC-201ENST00000387405 66 ntBASIC4.86□□□□□ -1.63
AP4E1Q9UPM8 CACYBP-203ENST00000406752 243 ntTSL 5 BASIC4.86□□□□□ -1.63
AP4E1Q9UPM8 TEX41-205ENST00000431734 529 ntTSL 4 BASIC4.86□□□□□ -1.63
AP4E1Q9UPM8 AL353997.1-201ENST00000432936 108 ntBASIC4.86□□□□□ -1.63
AP4E1Q9UPM8 AL137076.1-201ENST00000441046 551 ntTSL 2 BASIC4.86□□□□□ -1.63
AP4E1Q9UPM8 H2AFZP5-201ENST00000446960 382 ntBASIC4.86□□□□□ -1.63
AP4E1Q9UPM8 AL590664.1-201ENST00000448065 339 ntBASIC4.86□□□□□ -1.63
AP4E1Q9UPM8 RPL23AP31-201ENST00000456160 467 ntBASIC4.86□□□□□ -1.63
AP4E1Q9UPM8 LINC01510-203ENST00000458082 626 ntTSL 3 BASIC4.86□□□□□ -1.63
AP4E1Q9UPM8 CREM-230ENST00000474931 626 ntTSL 2 BASIC4.86□□□□□ -1.63
AP4E1Q9UPM8 RN7SKP82-201ENST00000516786 223 ntBASIC4.86□□□□□ -1.63
AP4E1Q9UPM8 MAL2-201ENST00000522112 573 ntTSL 4 BASIC4.86□□□□□ -1.63
AP4E1Q9UPM8 AC104576.1-201ENST00000524225 88 ntBASIC4.86□□□□□ -1.63
AP4E1Q9UPM8 AC022039.1-201ENST00000527110 488 ntTSL 2 BASIC4.86□□□□□ -1.63
AP4E1Q9UPM8 AC095350.2-201ENST00000544034 201 ntTSL 5 BASIC4.86□□□□□ -1.63
AP4E1Q9UPM8 LINC02327-203ENST00000550122 738 ntTSL 2 BASIC4.86□□□□□ -1.63
AP4E1Q9UPM8 RN7SL652P-201ENST00000577769 300 ntBASIC4.86□□□□□ -1.63
AP4E1Q9UPM8 AC091042.1-201ENST00000579213 173 ntBASIC4.86□□□□□ -1.63
AP4E1Q9UPM8 MIR99AHG-211ENST00000602323 475 ntTSL 5 BASIC4.86□□□□□ -1.63
AP4E1Q9UPM8 AC098479.1-201ENST00000609225 154 ntBASIC4.86□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 11.9 ms