Protein–RNA interactions for Protein: Q9UBQ0

VPS29, Vacuolar protein sorting-associated protein 29, humanhuman

Predictions only

Length 182 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS29Q9UBQ0 CERS6-AS1-209ENST00000609766 642 ntTSL 5 BASIC1.86□□□□□ -2.11
VPS29Q9UBQ0 U2.15-201ENST00000611544 191 ntBASIC1.86□□□□□ -2.11
VPS29Q9UBQ0 U2.16-201ENST00000613119 191 ntBASIC1.86□□□□□ -2.11
VPS29Q9UBQ0 U2.12-201ENST00000613778 191 ntBASIC1.86□□□□□ -2.11
VPS29Q9UBQ0 U2.20-201ENST00000613956 192 ntBASIC1.86□□□□□ -2.11
VPS29Q9UBQ0 U2.9-201ENST00000615427 191 ntBASIC1.86□□□□□ -2.11
VPS29Q9UBQ0 U2.11-201ENST00000616345 191 ntBASIC1.86□□□□□ -2.11
VPS29Q9UBQ0 U2.2-201ENST00000616535 191 ntBASIC1.86□□□□□ -2.11
VPS29Q9UBQ0 U2.3-201ENST00000617785 191 ntBASIC1.86□□□□□ -2.11
VPS29Q9UBQ0 U2.19-201ENST00000618602 191 ntBASIC1.86□□□□□ -2.11
VPS29Q9UBQ0 RNU2-1-201ENST00000618664 191 ntBASIC1.86□□□□□ -2.11
VPS29Q9UBQ0 U2.6-201ENST00000619225 191 ntBASIC1.86□□□□□ -2.11
VPS29Q9UBQ0 U2.5-201ENST00000619465 191 ntBASIC1.86□□□□□ -2.11
VPS29Q9UBQ0 AL445493.3-201ENST00000619568 477 ntBASIC1.86□□□□□ -2.11
VPS29Q9UBQ0 U2.10-201ENST00000620268 191 ntBASIC1.86□□□□□ -2.11
VPS29Q9UBQ0 YWHAEP7-203ENST00000622054 312 ntBASIC1.86□□□□□ -2.11
VPS29Q9UBQ0 KPNA2P1-201ENST00000458289 1591 ntBASIC1.85□□□□□ -2.11
VPS29Q9UBQ0 OR4G2P-202ENST00000641004 1759 ntBASIC1.85□□□□□ -2.11
VPS29Q9UBQ0 OSTN-201ENST00000339051 402 ntAPPRIS P1 TSL 1 (best) BASIC1.85□□□□□ -2.11
VPS29Q9UBQ0 OR6C75-201ENST00000343399 939 ntAPPRIS P1 BASIC1.85□□□□□ -2.11
VPS29Q9UBQ0 RNU6-76P-201ENST00000384060 104 ntBASIC1.85□□□□□ -2.11
VPS29Q9UBQ0 Y_RNA.500-201ENST00000384466 111 ntBASIC1.85□□□□□ -2.11
VPS29Q9UBQ0 RNU6ATAC37P-201ENST00000408328 131 ntBASIC1.85□□□□□ -2.11
VPS29Q9UBQ0 CYCSP48-201ENST00000417124 323 ntBASIC1.85□□□□□ -2.11
VPS29Q9UBQ0 AP000550.2-201ENST00000417463 774 ntTSL 5 BASIC1.85□□□□□ -2.11
VPS29Q9UBQ0 EIF1AXP1-201ENST00000419267 435 ntBASIC1.85□□□□□ -2.11
VPS29Q9UBQ0 TCEAL3-AS1-201ENST00000424887 361 ntTSL 5 BASIC1.85□□□□□ -2.11
VPS29Q9UBQ0 SMG7-AS1-202ENST00000432837 466 ntTSL 3 BASIC1.85□□□□□ -2.11
VPS29Q9UBQ0 AP000552.3-201ENST00000434730 775 ntTSL 5 BASIC1.85□□□□□ -2.11
VPS29Q9UBQ0 BNIP3P2-201ENST00000441221 577 ntBASIC1.85□□□□□ -2.11
VPS29Q9UBQ0 OR10R1P-201ENST00000441524 1141 ntBASIC1.85□□□□□ -2.11
VPS29Q9UBQ0 IKZF2-209ENST00000442445 551 ntTSL 5 BASIC1.85□□□□□ -2.11
VPS29Q9UBQ0 AL357514.1-201ENST00000446322 488 ntTSL 3 BASIC1.85□□□□□ -2.11
VPS29Q9UBQ0 UTAT33-202ENST00000449177 565 ntTSL 2 BASIC1.85□□□□□ -2.11
VPS29Q9UBQ0 MTND5P8-201ENST00000449817 1083 ntBASIC1.85□□□□□ -2.11
VPS29Q9UBQ0 PSPHP1-201ENST00000450062 261 ntBASIC1.85□□□□□ -2.11
VPS29Q9UBQ0 AC117462.1-201ENST00000461186 554 ntTSL 4 BASIC1.85□□□□□ -2.11
VPS29Q9UBQ0 AC072039.1-201ENST00000477611 581 ntBASIC1.85□□□□□ -2.11
VPS29Q9UBQ0 OR4G11P-201ENST00000492842 939 ntBASIC1.85□□□□□ -2.11
VPS29Q9UBQ0 RNA5SP364-201ENST00000516938 78 ntBASIC1.85□□□□□ -2.11
VPS29Q9UBQ0 RNA5SP135-201ENST00000517019 125 ntBASIC1.85□□□□□ -2.11
VPS29Q9UBQ0 HSPE1P18-201ENST00000517602 280 ntBASIC1.85□□□□□ -2.11
VPS29Q9UBQ0 AC008632.1-202ENST00000518605 452 ntTSL 3 BASIC1.85□□□□□ -2.11
VPS29Q9UBQ0 AC103794.1-201ENST00000531763 197 ntTSL 3 BASIC1.85□□□□□ -2.11
VPS29Q9UBQ0 APOOP1-201ENST00000604695 592 ntBASIC1.85□□□□□ -2.11
VPS29Q9UBQ0 AC034238.1-213ENST00000611148 150 ntTSL 5 BASIC1.85□□□□□ -2.11
VPS29Q9UBQ0 C16orf97-206ENST00000622950 415 ntTSL 2 BASIC1.85□□□□□ -2.11
VPS29Q9UBQ0 HMHB1-202ENST00000638299 126 ntAPPRIS P2 TSL 1 (best) BASIC1.85□□□□□ -2.11
VPS29Q9UBQ0 PSG8-202ENST00000401467 1686 ntTSL 5 BASIC1.85□□□□□ -2.11
VPS29Q9UBQ0 AL136537.2-201ENST00000562049 2471 ntTSL 1 (best) BASIC1.85□□□□□ -2.11
VPS29Q9UBQ0 ZNF639-206ENST00000484866 1730 ntAPPRIS P1 TSL 2 BASIC1.85□□□□□ -2.11
VPS29Q9UBQ0 RRAS2-211ENST00000537760 2034 ntTSL 2 BASIC1.84□□□□□ -2.11
VPS29Q9UBQ0 AK9-203ENST00000368948 2478 ntTSL 5 BASIC1.84□□□□□ -2.11
VPS29Q9UBQ0 GPR22-201ENST00000304402 2942 ntAPPRIS P1 TSL 1 (best) BASIC1.84□□□□□ -2.11
VPS29Q9UBQ0 XRCC4-205ENST00000511817 1636 ntAPPRIS P4 TSL 1 (best) BASIC1.84□□□□□ -2.11
VPS29Q9UBQ0 ZNF644-212ENST00000621077 2056 ntTSL 5 BASIC1.84□□□□□ -2.11
VPS29Q9UBQ0 SIRT1-203ENST00000406900 3295 ntTSL 2 BASIC1.84□□□□□ -2.11
VPS29Q9UBQ0 PTPRQ-209ENST00000616559 8165 ntTSL 5 BASIC1.84□□□□□ -2.11
VPS29Q9UBQ0 CASP3-203ENST00000393588 677 ntTSL 4 BASIC1.84□□□□□ -2.11
VPS29Q9UBQ0 RPL17P50-201ENST00000396131 546 ntBASIC1.84□□□□□ -2.11
VPS29Q9UBQ0 MTCO2P31-201ENST00000402702 684 ntBASIC1.84□□□□□ -2.11
VPS29Q9UBQ0 SUMO2P12-201ENST00000405924 140 ntBASIC1.84□□□□□ -2.11
VPS29Q9UBQ0 RNU2-49P-201ENST00000410666 184 ntBASIC1.84□□□□□ -2.11
VPS29Q9UBQ0 RN7SKP192-201ENST00000411291 327 ntBASIC1.84□□□□□ -2.11
VPS29Q9UBQ0 AL136133.1-201ENST00000413694 376 ntBASIC1.84□□□□□ -2.11
VPS29Q9UBQ0 AL391839.1-201ENST00000417447 265 ntTSL 2 BASIC1.84□□□□□ -2.11
VPS29Q9UBQ0 HMGB1P49-201ENST00000418882 569 ntBASIC1.84□□□□□ -2.11
VPS29Q9UBQ0 LINC02559-201ENST00000420391 188 ntTSL 2 BASIC1.84□□□□□ -2.11
VPS29Q9UBQ0 SRIP2-201ENST00000428470 166 ntBASIC1.84□□□□□ -2.11
VPS29Q9UBQ0 RPS15AP5-201ENST00000436276 388 ntBASIC1.84□□□□□ -2.11
VPS29Q9UBQ0 UBE2FP3-201ENST00000436366 524 ntBASIC1.84□□□□□ -2.11
VPS29Q9UBQ0 UBE2D3P1-201ENST00000436669 444 ntBASIC1.84□□□□□ -2.11
VPS29Q9UBQ0 TTTY16-201ENST00000437686 192 ntTSL 1 (best) BASIC1.84□□□□□ -2.11
VPS29Q9UBQ0 AC241584.1-201ENST00000438469 1241 ntBASIC1.84□□□□□ -2.11
VPS29Q9UBQ0 Z82210.1-201ENST00000440037 231 ntBASIC1.84□□□□□ -2.11
VPS29Q9UBQ0 AC055764.1-201ENST00000454526 473 ntTSL 3 BASIC1.84□□□□□ -2.11
VPS29Q9UBQ0 AP1S2P1-201ENST00000457344 379 ntBASIC1.84□□□□□ -2.11
VPS29Q9UBQ0 MRPS17P3-201ENST00000465453 385 ntBASIC1.84□□□□□ -2.11
VPS29Q9UBQ0 AC106872.3-201ENST00000495104 446 ntBASIC1.84□□□□□ -2.11
VPS29Q9UBQ0 AC131211.1-201ENST00000497285 483 ntTSL 5 BASIC1.84□□□□□ -2.11
VPS29Q9UBQ0 LIAS-206ENST00000513731 826 ntTSL 5 BASIC1.84□□□□□ -2.11
VPS29Q9UBQ0 AC022447.1-201ENST00000515358 464 ntBASIC1.84□□□□□ -2.11
VPS29Q9UBQ0 AC106895.1-201ENST00000515825 548 ntTSL 4 BASIC1.84□□□□□ -2.11
VPS29Q9UBQ0 HMGB1P1-201ENST00000522557 636 ntBASIC1.84□□□□□ -2.11
VPS29Q9UBQ0 AC004217.2-201ENST00000547401 751 ntTSL 3 BASIC1.84□□□□□ -2.11
VPS29Q9UBQ0 OR11H5P-201ENST00000554039 926 ntBASIC1.84□□□□□ -2.11
VPS29Q9UBQ0 AL359238.1-201ENST00000557770 744 ntTSL 3 BASIC1.84□□□□□ -2.11
VPS29Q9UBQ0 MIR5571-201ENST00000577998 113 ntBASIC1.84□□□□□ -2.11
VPS29Q9UBQ0 RNASEH2B-AS1-202ENST00000593369 648 ntTSL 5 BASIC1.84□□□□□ -2.11
VPS29Q9UBQ0 AC022145.1-201ENST00000600673 383 ntTSL 3 BASIC1.84□□□□□ -2.11
VPS29Q9UBQ0 SNRPGP19-201ENST00000603826 189 ntBASIC1.84□□□□□ -2.11
VPS29Q9UBQ0 VN1R74P-201ENST00000613259 503 ntBASIC1.84□□□□□ -2.11
VPS29Q9UBQ0 AC244517.12-201ENST00000623581 663 ntBASIC1.84□□□□□ -2.11
VPS29Q9UBQ0 AC244517.5-202ENST00000623741 500 ntTSL 3 BASIC1.84□□□□□ -2.11
VPS29Q9UBQ0 AL512506.2-201ENST00000624472 458 ntBASIC1.84□□□□□ -2.11
VPS29Q9UBQ0 VIM-AS1-201ENST00000437232 1351 ntTSL 2 BASIC1.84□□□□□ -2.12
VPS29Q9UBQ0 DYNC2H1-203ENST00000398093 12945 ntAPPRIS P3 TSL 5 BASIC1.84□□□□□ -2.12
VPS29Q9UBQ0 PCDH11Y-203ENST00000362095 4220 ntAPPRIS ALT2 TSL 1 (best) BASIC1.83□□□□□ -2.12
VPS29Q9UBQ0 ZNF355P-201ENST00000427301 3216 ntBASIC1.83□□□□□ -2.12
VPS29Q9UBQ0 AC005832.2-201ENST00000538921 1430 ntBASIC1.83□□□□□ -2.12
Retrieved 100 of 98,524 protein–RNA pairs in 85.7 ms