Protein–RNA interactions for Protein: Q9UBP4

DKK3, Dickkopf-related protein 3, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DKK3Q9UBP4 VEPH1-203ENST00000392833 3979 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
DKK3Q9UBP4 AL161912.2-201ENST00000565707 3007 ntBASIC4.01□□□□□ -1.77
DKK3Q9UBP4 AC006020.1-201ENST00000420179 1854 ntBASIC4.01□□□□□ -1.77
DKK3Q9UBP4 DTNA-208ENST00000554864 1680 ntAPPRIS ALT2 TSL 1 (best) BASIC4.01□□□□□ -1.77
DKK3Q9UBP4 AC024940.1-206ENST00000632817 4299 ntAPPRIS P5 TSL 5 BASIC4.01□□□□□ -1.77
DKK3Q9UBP4 RPL7P26-201ENST00000333817 754 ntBASIC4.01□□□□□ -1.77
DKK3Q9UBP4 OR2M2-201ENST00000359682 1044 ntAPPRIS P1 BASIC4.01□□□□□ -1.77
DKK3Q9UBP4 ACEA_U3.1-201ENST00000363057 217 ntBASIC4.01□□□□□ -1.77
DKK3Q9UBP4 RNU6-213P-201ENST00000384051 104 ntBASIC4.01□□□□□ -1.77
DKK3Q9UBP4 MIR634-201ENST00000385208 97 ntBASIC4.01□□□□□ -1.77
DKK3Q9UBP4 RNU2-9P-201ENST00000410194 145 ntBASIC4.01□□□□□ -1.77
DKK3Q9UBP4 RNA5SP306-201ENST00000411087 107 ntBASIC4.01□□□□□ -1.77
DKK3Q9UBP4 AC244098.2-201ENST00000422068 99 ntBASIC4.01□□□□□ -1.77
DKK3Q9UBP4 AC005062.1-206ENST00000424516 710 ntTSL 3 BASIC4.01□□□□□ -1.77
DKK3Q9UBP4 AC093581.1-202ENST00000430890 391 ntTSL 2 BASIC4.01□□□□□ -1.77
DKK3Q9UBP4 RPL36AP53-201ENST00000432891 316 ntBASIC4.01□□□□□ -1.77
DKK3Q9UBP4 TBCAP1-201ENST00000436520 327 ntBASIC4.01□□□□□ -1.77
DKK3Q9UBP4 ACBD3-AS1-201ENST00000440540 535 ntTSL 5 BASIC4.01□□□□□ -1.77
DKK3Q9UBP4 AL392046.1-203ENST00000450106 651 ntTSL 2 BASIC4.01□□□□□ -1.77
DKK3Q9UBP4 AC005062.1-201ENST00000457921 566 ntTSL 3 BASIC4.01□□□□□ -1.77
DKK3Q9UBP4 RNU7-63P-201ENST00000459054 62 ntBASIC4.01□□□□□ -1.77
DKK3Q9UBP4 RNU7-59P-201ENST00000459101 61 ntBASIC4.01□□□□□ -1.77
DKK3Q9UBP4 RPL31P13-201ENST00000484151 370 ntBASIC4.01□□□□□ -1.77
DKK3Q9UBP4 ARNTL2-AS1-201ENST00000500498 804 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
DKK3Q9UBP4 NREP-AS1-201ENST00000503242 411 ntTSL 3 BASIC4.01□□□□□ -1.77
DKK3Q9UBP4 AC017037.2-201ENST00000513850 890 ntBASIC4.01□□□□□ -1.77
DKK3Q9UBP4 LINC01969-201ENST00000514468 455 ntTSL 3 BASIC4.01□□□□□ -1.77
DKK3Q9UBP4 RNA5SP401-201ENST00000515920 127 ntBASIC4.01□□□□□ -1.77
DKK3Q9UBP4 IGKV2-38-201ENST00000517443 247 ntBASIC4.01□□□□□ -1.77
DKK3Q9UBP4 AC136475.4-201ENST00000534271 280 ntTSL 5 BASIC4.01□□□□□ -1.77
DKK3Q9UBP4 AC120057.2-201ENST00000571520 271 ntBASIC4.01□□□□□ -1.77
DKK3Q9UBP4 AP001180.2-201ENST00000579413 422 ntTSL 5 BASIC4.01□□□□□ -1.77
DKK3Q9UBP4 AC011712.1-201ENST00000588959 234 ntBASIC4.01□□□□□ -1.77
DKK3Q9UBP4 SNRPGP15-201ENST00000600149 222 ntBASIC4.01□□□□□ -1.77
DKK3Q9UBP4 AC128687.2-201ENST00000609657 566 ntBASIC4.01□□□□□ -1.77
DKK3Q9UBP4 AL121757.2-201ENST00000611223 313 ntBASIC4.01□□□□□ -1.77
DKK3Q9UBP4 AC010133.1-201ENST00000615809 842 ntBASIC4.01□□□□□ -1.77
DKK3Q9UBP4 TBC1D31-210ENST00000521676 3256 ntTSL 5 BASIC4.01□□□□□ -1.77
DKK3Q9UBP4 AL353746.1-201ENST00000566293 6881 ntBASIC4.01□□□□□ -1.77
DKK3Q9UBP4 SLC17A4-203ENST00000439485 3699 ntTSL 5 BASIC4.01□□□□□ -1.77
DKK3Q9UBP4 ADGRG2-205ENST00000357991 4661 ntAPPRIS P3 TSL 1 (best) BASIC4.01□□□□□ -1.77
DKK3Q9UBP4 ADGRL2-207ENST00000370723 5254 ntTSL 5 BASIC4.01□□□□□ -1.77
DKK3Q9UBP4 ADGRG4-203ENST00000394143 9931 ntAPPRIS P2 TSL 1 (best) BASIC4□□□□□ -1.77
DKK3Q9UBP4 LRMP-221ENST00000636465 4540 ntAPPRIS ALT2 TSL 5 BASIC4□□□□□ -1.77
DKK3Q9UBP4 OSBPL9P4-201ENST00000371707 1800 ntBASIC4□□□□□ -1.77
DKK3Q9UBP4 AC091152.2-201ENST00000591628 2569 ntBASIC4□□□□□ -1.77
DKK3Q9UBP4 ZBTB8OS-201ENST00000341885 312 ntTSL 1 (best) BASIC4□□□□□ -1.77
DKK3Q9UBP4 RNU6-845P-201ENST00000362578 103 ntBASIC4□□□□□ -1.77
DKK3Q9UBP4 RNU6-223P-201ENST00000362830 107 ntBASIC4□□□□□ -1.77
DKK3Q9UBP4 RNA5SP399-201ENST00000364003 117 ntBASIC4□□□□□ -1.77
DKK3Q9UBP4 5S_rRNA.1-201ENST00000364415 116 ntBASIC4□□□□□ -1.77
DKK3Q9UBP4 Y_RNA.255-201ENST00000364581 97 ntBASIC4□□□□□ -1.77
DKK3Q9UBP4 RNU4-48P-201ENST00000365559 182 ntBASIC4□□□□□ -1.77
DKK3Q9UBP4 RNU6-767P-201ENST00000384132 107 ntBASIC4□□□□□ -1.77
DKK3Q9UBP4 Y_RNA.509-201ENST00000384506 99 ntBASIC4□□□□□ -1.77
DKK3Q9UBP4 MIR558-201ENST00000384920 94 ntBASIC4□□□□□ -1.77
DKK3Q9UBP4 TRAJ21-201ENST00000390516 55 ntAPPRIS P1 BASIC4□□□□□ -1.77
DKK3Q9UBP4 SNORA3C-201ENST00000408792 125 ntBASIC4□□□□□ -1.77
DKK3Q9UBP4 RNU6-1068P-201ENST00000410958 103 ntBASIC4□□□□□ -1.77
DKK3Q9UBP4 AC009411.1-202ENST00000412424 548 ntTSL 4 BASIC4□□□□□ -1.77
DKK3Q9UBP4 LINC01349-201ENST00000416343 497 ntTSL 3 BASIC4□□□□□ -1.77
DKK3Q9UBP4 LINC01037-201ENST00000427337 424 ntTSL 5 BASIC4□□□□□ -1.77
DKK3Q9UBP4 YME1L1P1-201ENST00000429435 297 ntBASIC4□□□□□ -1.77
DKK3Q9UBP4 AC073342.1-202ENST00000446192 457 ntTSL 5 BASIC4□□□□□ -1.77
DKK3Q9UBP4 HMGB3P8-201ENST00000449709 577 ntBASIC4□□□□□ -1.77
DKK3Q9UBP4 SPIN4-AS1-201ENST00000451979 426 ntTSL 2 BASIC4□□□□□ -1.77
DKK3Q9UBP4 RPL7P49-201ENST00000471402 708 ntBASIC4□□□□□ -1.77
DKK3Q9UBP4 AC138057.1-201ENST00000497258 696 ntTSL 3 BASIC4□□□□□ -1.77
DKK3Q9UBP4 RPL23AP55-201ENST00000498163 452 ntBASIC4□□□□□ -1.77
DKK3Q9UBP4 AC108517.1-201ENST00000512546 327 ntTSL 3 BASIC4□□□□□ -1.77
DKK3Q9UBP4 AC105417.1-201ENST00000514691 285 ntBASIC4□□□□□ -1.77
DKK3Q9UBP4 HIGD1AP3-201ENST00000515857 278 ntBASIC4□□□□□ -1.77
DKK3Q9UBP4 OR5B19P-201ENST00000531766 928 ntBASIC4□□□□□ -1.77
DKK3Q9UBP4 AP000857.1-201ENST00000532151 543 ntBASIC4□□□□□ -1.77
DKK3Q9UBP4 CLEC7A-212ENST00000533022 625 ntTSL 1 (best) BASIC4□□□□□ -1.77
DKK3Q9UBP4 AC007368.1-201ENST00000536422 974 ntTSL 5 BASIC4□□□□□ -1.77
DKK3Q9UBP4 MGST1-215ENST00000540056 546 ntTSL 3 BASIC4□□□□□ -1.77
DKK3Q9UBP4 UTS2-201ENST00000054668 420 ntAPPRIS P4 TSL 1 (best) BASIC4□□□□□ -1.77
DKK3Q9UBP4 ARL2BPP2-201ENST00000550907 489 ntBASIC4□□□□□ -1.77
DKK3Q9UBP4 AL355076.2-202ENST00000553754 574 ntTSL 4 BASIC4□□□□□ -1.77
DKK3Q9UBP4 RPL21P12-201ENST00000559810 515 ntBASIC4□□□□□ -1.77
DKK3Q9UBP4 AC003687.1-201ENST00000578040 427 ntTSL 3 BASIC4□□□□□ -1.77
DKK3Q9UBP4 RN7SL703P-201ENST00000578485 302 ntBASIC4□□□□□ -1.77
DKK3Q9UBP4 AC015908.4-201ENST00000582334 575 ntTSL 4 BASIC4□□□□□ -1.77
DKK3Q9UBP4 AC006329.2-201ENST00000611491 394 ntBASIC4□□□□□ -1.77
DKK3Q9UBP4 RDM1-221ENST00000617591 432 ntTSL 1 (best) BASIC4□□□□□ -1.77
DKK3Q9UBP4 NRDE2-210ENST00000628832 132 ntTSL 5 BASIC4□□□□□ -1.77
DKK3Q9UBP4 NCOA1-202ENST00000348332 6895 ntAPPRIS P4 TSL 1 (best) BASIC3.99□□□□□ -1.77
DKK3Q9UBP4 C1orf141-202ENST00000371006 2053 ntAPPRIS P3 TSL 2 BASIC3.99□□□□□ -1.77
DKK3Q9UBP4 ETV1-202ENST00000399357 6096 ntTSL 2 BASIC3.99□□□□□ -1.77
DKK3Q9UBP4 PHF20L1-210ENST00000395390 5900 ntTSL 5 BASIC3.99□□□□□ -1.77
DKK3Q9UBP4 RNF111-206ENST00000559209 5278 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
DKK3Q9UBP4 GPR183-201ENST00000376414 1700 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
DKK3Q9UBP4 ZNF616-201ENST00000330123 2563 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
DKK3Q9UBP4 PRKD3-202ENST00000379066 6111 ntAPPRIS P1 TSL 5 BASIC3.99□□□□□ -1.77
DKK3Q9UBP4 ANGPTL1-202ENST00000367629 2289 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
DKK3Q9UBP4 HSPE1P11-201ENST00000339579 310 ntBASIC3.99□□□□□ -1.77
DKK3Q9UBP4 Y_RNA.142-201ENST00000363491 102 ntBASIC3.99□□□□□ -1.77
DKK3Q9UBP4 RNU6-511P-201ENST00000363496 107 ntBASIC3.99□□□□□ -1.77
DKK3Q9UBP4 Y_RNA.166-201ENST00000363730 102 ntBASIC3.99□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 86.2 ms