Protein–RNA interactions for Protein: Q9UBK2

PPARGC1A, Peroxisome proliferator-activated receptor gamma coactivator 1-alpha, humanhuman

Known RBP Predictions only

Length 798 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PPARGC1AQ9UBK2 RPL38-208ENST00000584577 344 ntAPPRIS ALT1 TSL 3 BASIC4.5□□□□□ -1.69
PPARGC1AQ9UBK2 DPPA3P3-201ENST00000603842 430 ntBASIC4.5□□□□□ -1.69
PPARGC1AQ9UBK2 AC104763.2-201ENST00000604179 382 ntBASIC4.5□□□□□ -1.69
PPARGC1AQ9UBK2 AC104662.1-201ENST00000604448 511 ntBASIC4.5□□□□□ -1.69
PPARGC1AQ9UBK2 AL360085.1-201ENST00000604713 532 ntBASIC4.5□□□□□ -1.69
PPARGC1AQ9UBK2 C2orf91-203ENST00000615044 393 ntAPPRIS ALT2 TSL 5 BASIC4.5□□□□□ -1.69
PPARGC1AQ9UBK2 AC244093.3-201ENST00000615419 411 ntTSL 3 BASIC4.5□□□□□ -1.69
PPARGC1AQ9UBK2 AL021997.2-201ENST00000615674 271 ntBASIC4.5□□□□□ -1.69
PPARGC1AQ9UBK2 AC140479.6-201ENST00000633535 357 ntBASIC4.5□□□□□ -1.69
PPARGC1AQ9UBK2 GABRB2-203ENST00000393959 7191 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
PPARGC1AQ9UBK2 MMRN1-204ENST00000508372 3234 ntTSL 2 BASIC4.5□□□□□ -1.69
PPARGC1AQ9UBK2 PHF20L1-210ENST00000395390 5900 ntTSL 5 BASIC4.5□□□□□ -1.69
PPARGC1AQ9UBK2 APC-207ENST00000508376 10619 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
PPARGC1AQ9UBK2 SENP7-202ENST00000348610 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC4.49□□□□□ -1.69
PPARGC1AQ9UBK2 MUC7-203ENST00000456088 2479 ntAPPRIS P2 TSL 4 BASIC4.49□□□□□ -1.69
PPARGC1AQ9UBK2 CACNB4-257ENST00000637547 7658 ntTSL 5 BASIC4.49□□□□□ -1.69
PPARGC1AQ9UBK2 SLC17A3-204ENST00000397060 2052 ntAPPRIS P1 TSL 2 BASIC4.49□□□□□ -1.69
PPARGC1AQ9UBK2 ZNF510-201ENST00000223428 5154 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
PPARGC1AQ9UBK2 LINC01239-202ENST00000436786 2347 ntTSL 2 BASIC4.49□□□□□ -1.69
PPARGC1AQ9UBK2 TMEM59-205ENST00000371348 1911 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
PPARGC1AQ9UBK2 RNU6-254P-201ENST00000363377 107 ntBASIC4.49□□□□□ -1.69
PPARGC1AQ9UBK2 MIR513A2-201ENST00000385249 127 ntBASIC4.49□□□□□ -1.69
PPARGC1AQ9UBK2 RNU6-817P-201ENST00000391083 104 ntBASIC4.49□□□□□ -1.69
PPARGC1AQ9UBK2 MIR548F5-201ENST00000408421 86 ntBASIC4.49□□□□□ -1.69
PPARGC1AQ9UBK2 RPL37P10-201ENST00000412884 288 ntBASIC4.49□□□□□ -1.69
PPARGC1AQ9UBK2 AC104058.1-201ENST00000448028 297 ntBASIC4.49□□□□□ -1.69
PPARGC1AQ9UBK2 AL356859.1-201ENST00000449180 414 ntTSL 5 BASIC4.49□□□□□ -1.69
PPARGC1AQ9UBK2 FGF7P3-201ENST00000454645 303 ntBASIC4.49□□□□□ -1.69
PPARGC1AQ9UBK2 AL353780.1-201ENST00000455583 458 ntTSL 2 BASIC4.49□□□□□ -1.69
PPARGC1AQ9UBK2 Y_RNA.631-201ENST00000459607 101 ntBASIC4.49□□□□□ -1.69
PPARGC1AQ9UBK2 RPL21P93-201ENST00000480465 489 ntBASIC4.49□□□□□ -1.69
PPARGC1AQ9UBK2 UBE2Q2P9-201ENST00000490086 202 ntBASIC4.49□□□□□ -1.69
PPARGC1AQ9UBK2 RBBP4P6-201ENST00000508098 202 ntBASIC4.49□□□□□ -1.69
PPARGC1AQ9UBK2 HHIP-AS1-203ENST00000512359 646 ntTSL 3 BASIC4.49□□□□□ -1.69
PPARGC1AQ9UBK2 AC004054.1-201ENST00000515111 270 ntTSL 3 BASIC4.49□□□□□ -1.69
PPARGC1AQ9UBK2 RNU6-123P-201ENST00000516163 102 ntBASIC4.49□□□□□ -1.69
PPARGC1AQ9UBK2 RNU6-327P-201ENST00000516270 127 ntBASIC4.49□□□□□ -1.69
PPARGC1AQ9UBK2 AC064807.2-201ENST00000521188 672 ntTSL 3 BASIC4.49□□□□□ -1.69
PPARGC1AQ9UBK2 AP006587.4-201ENST00000526053 529 ntBASIC4.49□□□□□ -1.69
PPARGC1AQ9UBK2 AC090592.1-203ENST00000533942 575 ntTSL 3 BASIC4.49□□□□□ -1.69
PPARGC1AQ9UBK2 AC090115.3-201ENST00000553218 849 ntBASIC4.49□□□□□ -1.69
PPARGC1AQ9UBK2 OR4H12P-201ENST00000556269 907 ntBASIC4.49□□□□□ -1.69
PPARGC1AQ9UBK2 AP001496.1-201ENST00000579113 471 ntTSL 4 BASIC4.49□□□□□ -1.69
PPARGC1AQ9UBK2 AC067852.3-201ENST00000589177 561 ntBASIC4.49□□□□□ -1.69
PPARGC1AQ9UBK2 AC006504.6-201ENST00000590142 199 ntBASIC4.49□□□□□ -1.69
PPARGC1AQ9UBK2 AC079610.3-201ENST00000606960 147 ntTSL 3 BASIC4.49□□□□□ -1.69
PPARGC1AQ9UBK2 U2.17-201ENST00000611454 95 ntBASIC4.49□□□□□ -1.69
PPARGC1AQ9UBK2 AC004825.2-201ENST00000616634 455 ntBASIC4.49□□□□□ -1.69
PPARGC1AQ9UBK2 AC008013.2-202ENST00000637965 364 ntBASIC4.49□□□□□ -1.69
PPARGC1AQ9UBK2 NEGR1-201ENST00000306821 5577 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
PPARGC1AQ9UBK2 LINC00158-201ENST00000332587 1476 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
PPARGC1AQ9UBK2 AC092650.1-201ENST00000447571 1808 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
PPARGC1AQ9UBK2 AGTR1-202ENST00000402260 2172 ntTSL 5 BASIC4.48□□□□□ -1.69
PPARGC1AQ9UBK2 SGO1-AS1-203ENST00000455626 2041 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
PPARGC1AQ9UBK2 AC027290.2-201ENST00000623210 18662 ntBASIC4.48□□□□□ -1.69
PPARGC1AQ9UBK2 ZSCAN26-204ENST00000614088 2321 ntTSL 3 BASIC4.48□□□□□ -1.69
PPARGC1AQ9UBK2 RNU6-190P-201ENST00000384154 102 ntBASIC4.48□□□□□ -1.69
PPARGC1AQ9UBK2 RNU6-882P-201ENST00000391025 103 ntBASIC4.48□□□□□ -1.69
PPARGC1AQ9UBK2 DEFB110-202ENST00000393660 189 ntAPPRIS ALT2 TSL 1 (best) BASIC4.48□□□□□ -1.69
PPARGC1AQ9UBK2 AC097374.1-203ENST00000400783 485 ntBASIC4.48□□□□□ -1.69
PPARGC1AQ9UBK2 RPL7AP73-201ENST00000413490 353 ntBASIC4.48□□□□□ -1.69
PPARGC1AQ9UBK2 AC138024.1-201ENST00000420867 699 ntTSL 3 BASIC4.48□□□□□ -1.69
PPARGC1AQ9UBK2 MTND2P23-201ENST00000422990 651 ntBASIC4.48□□□□□ -1.69
PPARGC1AQ9UBK2 UTS2B-203ENST00000427544 676 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
PPARGC1AQ9UBK2 LINC01208-202ENST00000434969 827 ntTSL 2 BASIC4.48□□□□□ -1.69
PPARGC1AQ9UBK2 MACC1-AS1-201ENST00000439285 639 ntTSL 3 BASIC4.48□□□□□ -1.69
PPARGC1AQ9UBK2 LINC00280-201ENST00000439525 448 ntTSL 2 BASIC4.48□□□□□ -1.69
PPARGC1AQ9UBK2 AL691497.1-201ENST00000443270 449 ntTSL 2 BASIC4.48□□□□□ -1.69
PPARGC1AQ9UBK2 C10orf128-207ENST00000474718 614 ntAPPRIS P3 TSL 1 (best) BASIC4.48□□□□□ -1.69
PPARGC1AQ9UBK2 MGC32805-203ENST00000506053 652 ntTSL 3 BASIC4.48□□□□□ -1.69
PPARGC1AQ9UBK2 AC016598.2-201ENST00000514942 525 ntTSL 5 BASIC4.48□□□□□ -1.69
PPARGC1AQ9UBK2 RNU6-677P-201ENST00000516914 101 ntBASIC4.48□□□□□ -1.69
PPARGC1AQ9UBK2 RN7SKP258-201ENST00000517151 304 ntBASIC4.48□□□□□ -1.69
PPARGC1AQ9UBK2 RNA5SP454-201ENST00000517231 127 ntBASIC4.48□□□□□ -1.69
PPARGC1AQ9UBK2 AC087439.1-201ENST00000517920 398 ntTSL 3 BASIC4.48□□□□□ -1.69
PPARGC1AQ9UBK2 RANP9-201ENST00000519957 271 ntBASIC4.48□□□□□ -1.69
PPARGC1AQ9UBK2 AP000755.2-201ENST00000526777 571 ntTSL 5 BASIC4.48□□□□□ -1.69
PPARGC1AQ9UBK2 AC113192.5-201ENST00000528779 486 ntTSL 2 BASIC4.48□□□□□ -1.69
PPARGC1AQ9UBK2 ASB8-204ENST00000536071 568 ntTSL 4 BASIC4.48□□□□□ -1.69
PPARGC1AQ9UBK2 AL352979.3-201ENST00000553515 247 ntBASIC4.48□□□□□ -1.69
PPARGC1AQ9UBK2 AC007151.1-201ENST00000572774 483 ntBASIC4.48□□□□□ -1.69
PPARGC1AQ9UBK2 MIR4790-201ENST00000577799 79 ntBASIC4.48□□□□□ -1.69
PPARGC1AQ9UBK2 MIR3171-201ENST00000584270 74 ntBASIC4.48□□□□□ -1.69
PPARGC1AQ9UBK2 PSMD5-AS1-203ENST00000589026 525 ntTSL 5 BASIC4.48□□□□□ -1.69
PPARGC1AQ9UBK2 SNRPGP17-201ENST00000603780 214 ntBASIC4.48□□□□□ -1.69
PPARGC1AQ9UBK2 AL080274.1-201ENST00000605565 220 ntBASIC4.48□□□□□ -1.69
PPARGC1AQ9UBK2 AL627309.6-201ENST00000606857 840 ntBASIC4.48□□□□□ -1.69
PPARGC1AQ9UBK2 AC004696.1-201ENST00000614345 607 ntBASIC4.48□□□□□ -1.69
PPARGC1AQ9UBK2 SDR42E1P2-201ENST00000614861 481 ntBASIC4.48□□□□□ -1.69
PPARGC1AQ9UBK2 NFAT5-203ENST00000393742 13067 ntAPPRIS ALT1 TSL 1 (best) BASIC4.48□□□□□ -1.69
PPARGC1AQ9UBK2 C6orf10-207ENST00000533191 2170 ntAPPRIS ALT2 TSL 1 (best) BASIC4.48□□□□□ -1.69
PPARGC1AQ9UBK2 PIGN-229ENST00000638936 4233 ntAPPRIS P1 TSL 5 BASIC4.48□□□□□ -1.69
PPARGC1AQ9UBK2 BRCA2-201ENST00000380152 11986 ntAPPRIS P1 TSL 5 BASIC4.48□□□□□ -1.69
PPARGC1AQ9UBK2 ZNF638-203ENST00000409544 6821 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
PPARGC1AQ9UBK2 CDR1-201ENST00000370532 2467 ntAPPRIS P1 BASIC4.48□□□□□ -1.69
PPARGC1AQ9UBK2 OR8D1-203ENST00000641897 8285 ntAPPRIS P1 BASIC4.48□□□□□ -1.69
PPARGC1AQ9UBK2 VPS13C-202ENST00000261517 13400 ntAPPRIS ALT2 TSL 1 (best) BASIC4.48□□□□□ -1.69
PPARGC1AQ9UBK2 LRRC39-201ENST00000342895 1881 ntAPPRIS P1 TSL 5 BASIC4.47□□□□□ -1.69
PPARGC1AQ9UBK2 RNMT-206ENST00000589866 1879 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
PPARGC1AQ9UBK2 TFPI-203ENST00000392365 3649 ntAPPRIS P1 TSL 5 BASIC4.47□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 86.4 ms