Protein–RNA interactions for Protein: Q9P218

COL20A1, Collagen alpha-1(XX) chain, humanhuman

Predictions only

Length 1,284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL20A1Q9P218 AL353148.1-204ENST00000426752 477 ntTSL 5 BASIC4.01□□□□□ -1.77
COL20A1Q9P218 AC005300.1-201ENST00000428401 373 ntBASIC4.01□□□□□ -1.77
COL20A1Q9P218 AL355303.1-201ENST00000428920 680 ntTSL 3 BASIC4.01□□□□□ -1.77
COL20A1Q9P218 RPL23AP30-201ENST00000432419 501 ntBASIC4.01□□□□□ -1.77
COL20A1Q9P218 RPL36AP6-201ENST00000435770 321 ntBASIC4.01□□□□□ -1.77
COL20A1Q9P218 HMGB3P12-201ENST00000438745 556 ntBASIC4.01□□□□□ -1.77
COL20A1Q9P218 RPL26P6-201ENST00000440913 438 ntBASIC4.01□□□□□ -1.77
COL20A1Q9P218 LINC00278-202ENST00000444263 587 ntTSL 3 BASIC4.01□□□□□ -1.77
COL20A1Q9P218 AC092264.1-201ENST00000456002 713 ntTSL 5 BASIC4.01□□□□□ -1.77
COL20A1Q9P218 NIPA2P2-201ENST00000496376 1083 ntBASIC4.01□□□□□ -1.77
COL20A1Q9P218 AC117522.1-201ENST00000509821 380 ntBASIC4.01□□□□□ -1.77
COL20A1Q9P218 AC097467.3-212ENST00000512269 568 ntTSL 3 BASIC4.01□□□□□ -1.77
COL20A1Q9P218 RNU6-579P-201ENST00000516879 102 ntBASIC4.01□□□□□ -1.77
COL20A1Q9P218 RNU6-1092P-201ENST00000516955 87 ntBASIC4.01□□□□□ -1.77
COL20A1Q9P218 AC102945.1-201ENST00000522640 407 ntTSL 2 BASIC4.01□□□□□ -1.77
COL20A1Q9P218 AHI1-217ENST00000534469 680 ntTSL 3 BASIC4.01□□□□□ -1.77
COL20A1Q9P218 NCAPGP2-201ENST00000557911 754 ntBASIC4.01□□□□□ -1.77
COL20A1Q9P218 AC012229.1-201ENST00000558699 499 ntTSL 4 BASIC4.01□□□□□ -1.77
COL20A1Q9P218 AC120045.1-201ENST00000563502 251 ntTSL 3 BASIC4.01□□□□□ -1.77
COL20A1Q9P218 AC025678.1-201ENST00000567861 338 ntBASIC4.01□□□□□ -1.77
COL20A1Q9P218 AC139426.2-201ENST00000568289 251 ntTSL 3 BASIC4.01□□□□□ -1.77
COL20A1Q9P218 SNORA59B-202ENST00000578183 701 ntBASIC4.01□□□□□ -1.77
COL20A1Q9P218 AP001172.2-201ENST00000602454 467 ntTSL 5 BASIC4.01□□□□□ -1.77
COL20A1Q9P218 AD001527.1-201ENST00000604228 379 ntTSL 5 BASIC4.01□□□□□ -1.77
COL20A1Q9P218 AP001330.4-201ENST00000604350 154 ntBASIC4.01□□□□□ -1.77
COL20A1Q9P218 AC008536.2-201ENST00000607284 349 ntBASIC4.01□□□□□ -1.77
COL20A1Q9P218 SDR42E1P2-201ENST00000614861 481 ntBASIC4.01□□□□□ -1.77
COL20A1Q9P218 LINC02086-205ENST00000628749 679 ntTSL 5 BASIC4.01□□□□□ -1.77
COL20A1Q9P218 AL732372.2-225ENST00000642124 456 ntBASIC4.01□□□□□ -1.77
COL20A1Q9P218 AL137003.2-201ENST00000606924 2538 ntBASIC4.01□□□□□ -1.77
COL20A1Q9P218 USP8P1-201ENST00000494673 3183 ntBASIC4.01□□□□□ -1.77
COL20A1Q9P218 AL589745.1-201ENST00000421190 3336 ntTSL 5 BASIC4.01□□□□□ -1.77
COL20A1Q9P218 SLC25A46-206ENST00000509432 1596 ntTSL 2 BASIC4.01□□□□□ -1.77
COL20A1Q9P218 MCF2-202ENST00000370573 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC4.01□□□□□ -1.77
COL20A1Q9P218 PCDH15-234ENST00000622048 6820 ntTSL 5 BASIC4.01□□□□□ -1.77
COL20A1Q9P218 MBD5-202ENST00000407073 9512 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
COL20A1Q9P218 OTUD4P1-201ENST00000237841 3067 ntBASIC4□□□□□ -1.77
COL20A1Q9P218 RNU5A-1-201ENST00000362698 116 ntBASIC4□□□□□ -1.77
COL20A1Q9P218 RNY4P14-201ENST00000363656 96 ntBASIC4□□□□□ -1.77
COL20A1Q9P218 Y_RNA.409-201ENST00000383990 98 ntBASIC4□□□□□ -1.77
COL20A1Q9P218 RNU6-641P-201ENST00000384006 107 ntBASIC4□□□□□ -1.77
COL20A1Q9P218 GRM7-AS1-201ENST00000420230 430 ntTSL 3 BASIC4□□□□□ -1.77
COL20A1Q9P218 AC008850.1-201ENST00000427546 362 ntBASIC4□□□□□ -1.77
COL20A1Q9P218 RPL7L1P10-201ENST00000427790 463 ntBASIC4□□□□□ -1.77
COL20A1Q9P218 AC017083.1-201ENST00000428093 483 ntBASIC4□□□□□ -1.77
COL20A1Q9P218 FTH1P6-201ENST00000430768 320 ntBASIC4□□□□□ -1.77
COL20A1Q9P218 MRPS10P2-201ENST00000431226 381 ntBASIC4□□□□□ -1.77
COL20A1Q9P218 AL691515.1-201ENST00000432976 733 ntTSL 2 BASIC4□□□□□ -1.77
COL20A1Q9P218 MACC1-AS1-201ENST00000439285 639 ntTSL 3 BASIC4□□□□□ -1.77
COL20A1Q9P218 DDX3P2-201ENST00000446138 111 ntBASIC4□□□□□ -1.77
COL20A1Q9P218 AL157882.1-201ENST00000447148 429 ntTSL 3 BASIC4□□□□□ -1.77
COL20A1Q9P218 AC007879.3-202ENST00000448786 823 ntTSL 1 (best) BASIC4□□□□□ -1.77
COL20A1Q9P218 AC013269.3-201ENST00000450486 444 ntTSL 3 BASIC4□□□□□ -1.77
COL20A1Q9P218 AC098820.1-201ENST00000453157 512 ntTSL 2 BASIC4□□□□□ -1.77
COL20A1Q9P218 LINC01510-203ENST00000458082 626 ntTSL 3 BASIC4□□□□□ -1.77
COL20A1Q9P218 ARL2BPP6-201ENST00000512757 439 ntBASIC4□□□□□ -1.77
COL20A1Q9P218 AC093206.1-201ENST00000515364 497 ntTSL 3 BASIC4□□□□□ -1.77
COL20A1Q9P218 IGKV2-26-201ENST00000518305 343 ntBASIC4□□□□□ -1.77
COL20A1Q9P218 LINC01965-204ENST00000545549 575 ntTSL 4 BASIC4□□□□□ -1.77
COL20A1Q9P218 AL160237.1-201ENST00000554526 572 ntTSL 4 BASIC4□□□□□ -1.77
COL20A1Q9P218 AL160191.1-201ENST00000555480 566 ntTSL 4 BASIC4□□□□□ -1.77
COL20A1Q9P218 MIR3200-201ENST00000580767 85 ntBASIC4□□□□□ -1.77
COL20A1Q9P218 AC067852.3-201ENST00000589177 561 ntBASIC4□□□□□ -1.77
COL20A1Q9P218 AC104534.1-201ENST00000594558 566 ntTSL 4 BASIC4□□□□□ -1.77
COL20A1Q9P218 AC025449.1-201ENST00000603896 529 ntBASIC4□□□□□ -1.77
COL20A1Q9P218 AC006023.2-201ENST00000609916 167 ntBASIC4□□□□□ -1.77
COL20A1Q9P218 AL442067.2-201ENST00000614033 363 ntBASIC4□□□□□ -1.77
COL20A1Q9P218 AC010133.1-201ENST00000615809 842 ntBASIC4□□□□□ -1.77
COL20A1Q9P218 TEX41-265ENST00000627785 704 ntTSL 5 BASIC4□□□□□ -1.77
COL20A1Q9P218 TEX41-280ENST00000629185 591 ntTSL 5 BASIC4□□□□□ -1.77
COL20A1Q9P218 TAS2R14-202ENST00000537503 1858 ntAPPRIS P1 BASIC4□□□□□ -1.77
COL20A1Q9P218 RNF38-203ENST00000353739 4945 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
COL20A1Q9P218 ATP2B1-203ENST00000393164 3127 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
COL20A1Q9P218 NR3C1-202ENST00000343796 7286 ntAPPRIS P3 TSL 5 BASIC3.99□□□□□ -1.77
COL20A1Q9P218 LTN1-207ENST00000614971 7756 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
COL20A1Q9P218 PTAR1-202ENST00000377200 9876 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
COL20A1Q9P218 TUSC7-203ENST00000477539 2415 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
COL20A1Q9P218 PRB2-201ENST00000389362 1429 ntAPPRIS P2 TSL 5 BASIC3.99□□□□□ -1.77
COL20A1Q9P218 PLCL1-203ENST00000437704 5979 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
COL20A1Q9P218 RNU6-74P-201ENST00000384235 107 ntBASIC3.99□□□□□ -1.77
COL20A1Q9P218 RNU6-606P-201ENST00000384721 111 ntBASIC3.99□□□□□ -1.77
COL20A1Q9P218 SNORD115-47-201ENST00000391226 86 ntBASIC3.99□□□□□ -1.77
COL20A1Q9P218 ELAVL2-204ENST00000397312 3805 ntAPPRIS P3 TSL 1 (best) BASIC3.99□□□□□ -1.77
COL20A1Q9P218 U3.39-201ENST00000408569 239 ntBASIC3.99□□□□□ -1.77
COL20A1Q9P218 MIR1290-201ENST00000408735 78 ntBASIC3.99□□□□□ -1.77
COL20A1Q9P218 RN7SKP285-201ENST00000410137 318 ntBASIC3.99□□□□□ -1.77
COL20A1Q9P218 RNU2-71P-201ENST00000411395 189 ntBASIC3.99□□□□□ -1.77
COL20A1Q9P218 BX323014.1-201ENST00000412876 237 ntBASIC3.99□□□□□ -1.77
COL20A1Q9P218 LINC01707-201ENST00000425517 627 ntTSL 3 BASIC3.99□□□□□ -1.77
COL20A1Q9P218 AL139415.2-201ENST00000431968 163 ntBASIC3.99□□□□□ -1.77
COL20A1Q9P218 AL591721.1-201ENST00000439849 751 ntTSL 3 BASIC3.99□□□□□ -1.77
COL20A1Q9P218 AL845311.1-201ENST00000444791 891 ntTSL 3 BASIC3.99□□□□□ -1.77
COL20A1Q9P218 AP000431.2-201ENST00000450653 790 ntTSL 2 BASIC3.99□□□□□ -1.77
COL20A1Q9P218 BX510359.1-201ENST00000456973 237 ntBASIC3.99□□□□□ -1.77
COL20A1Q9P218 AL121769.1-201ENST00000469473 401 ntBASIC3.99□□□□□ -1.77
COL20A1Q9P218 AC126389.1-201ENST00000477436 290 ntBASIC3.99□□□□□ -1.77
COL20A1Q9P218 HSPE1P6-201ENST00000479457 291 ntBASIC3.99□□□□□ -1.77
COL20A1Q9P218 AC109927.2-201ENST00000506416 303 ntBASIC3.99□□□□□ -1.77
COL20A1Q9P218 LINC02174-201ENST00000508977 553 ntTSL 3 BASIC3.99□□□□□ -1.77
COL20A1Q9P218 AC112196.1-201ENST00000515092 832 ntTSL 3 BASIC3.99□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 78 ms