Protein–RNA interactions for Protein: Q9P1Z9

CCDC180, Coiled-coil domain-containing protein 180, humanhuman

Predictions only

Length 1,646 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC180Q9P1Z9 MIR4295-201ENST00000585286 85 ntBASIC2.15□□□□□ -2.07
CCDC180Q9P1Z9 AC008133.2-201ENST00000624540 351 ntBASIC2.15□□□□□ -2.07
CCDC180Q9P1Z9 PPP1R3A-201ENST00000284601 4384 ntAPPRIS P1 TSL 1 (best) BASIC2.14□□□□□ -2.07
CCDC180Q9P1Z9 AC011604.2-202ENST00000540229 2451 ntAPPRIS P5 TSL 2 BASIC2.14□□□□□ -2.07
CCDC180Q9P1Z9 CD24P4-201ENST00000382840 243 ntBASIC2.14□□□□□ -2.07
CCDC180Q9P1Z9 Y_RNA.393-201ENST00000383936 102 ntBASIC2.14□□□□□ -2.07
CCDC180Q9P1Z9 BBIP1-206ENST00000447005 727 ntAPPRIS P1 TSL 2 BASIC2.14□□□□□ -2.07
CCDC180Q9P1Z9 LINC02103-201ENST00000512849 523 ntTSL 5 BASIC2.14□□□□□ -2.07
CCDC180Q9P1Z9 AP001528.2-201ENST00000528660 1156 ntTSL 5 BASIC2.14□□□□□ -2.07
CCDC180Q9P1Z9 AC007275.1-201ENST00000621243 671 ntBASIC2.14□□□□□ -2.07
CCDC180Q9P1Z9 TRAJ22-201ENST00000390515 63 ntAPPRIS P1 BASIC2.13□□□□□ -2.07
CCDC180Q9P1Z9 AC005062.1-207ENST00000418442 587 ntTSL 3 BASIC2.13□□□□□ -2.07
CCDC180Q9P1Z9 AL590705.2-201ENST00000420204 281 ntTSL 5 BASIC2.13□□□□□ -2.07
CCDC180Q9P1Z9 THAP5P1-201ENST00000439089 262 ntBASIC2.13□□□□□ -2.07
CCDC180Q9P1Z9 AL357134.1-201ENST00000445848 426 ntBASIC2.13□□□□□ -2.07
CCDC180Q9P1Z9 RPS29P23-201ENST00000458635 123 ntBASIC2.13□□□□□ -2.07
CCDC180Q9P1Z9 AC105252.1-201ENST00000503089 286 ntBASIC2.13□□□□□ -2.07
CCDC180Q9P1Z9 IGHVIII-38-1-201ENST00000521454 282 ntBASIC2.13□□□□□ -2.07
CCDC180Q9P1Z9 AC136188.1-201ENST00000546770 342 ntTSL 3 BASIC2.13□□□□□ -2.07
CCDC180Q9P1Z9 AL133507.1-201ENST00000605269 557 ntBASIC2.13□□□□□ -2.07
CCDC180Q9P1Z9 MIR17-201ENST00000385012 84 ntBASIC2.13□□□□□ -2.07
CCDC180Q9P1Z9 CFLAR-AS1-201ENST00000415011 1072 ntTSL 1 (best) BASIC2.13□□□□□ -2.07
CCDC180Q9P1Z9 CYCSP48-201ENST00000417124 323 ntBASIC2.13□□□□□ -2.07
CCDC180Q9P1Z9 COX6CP18-201ENST00000448769 222 ntBASIC2.13□□□□□ -2.07
CCDC180Q9P1Z9 AC022880.1-201ENST00000534017 973 ntBASIC2.13□□□□□ -2.07
CCDC180Q9P1Z9 IL33-201ENST00000381434 2641 ntAPPRIS P1 TSL 1 (best) BASIC2.12□□□□□ -2.07
CCDC180Q9P1Z9 CNIH4-201ENST00000366856 808 ntAPPRIS ALT1 TSL 2 BASIC2.12□□□□□ -2.07
CCDC180Q9P1Z9 STAT4-203ENST00000409995 709 ntTSL 5 BASIC2.12□□□□□ -2.07
CCDC180Q9P1Z9 AP001043.2-201ENST00000434589 288 ntTSL 3 BASIC2.12□□□□□ -2.07
CCDC180Q9P1Z9 CASP3P1-201ENST00000446037 609 ntBASIC2.12□□□□□ -2.07
CCDC180Q9P1Z9 AP000431.2-201ENST00000450653 790 ntTSL 2 BASIC2.12□□□□□ -2.07
CCDC180Q9P1Z9 AL121821.2-201ENST00000556081 394 ntBASIC2.12□□□□□ -2.07
CCDC180Q9P1Z9 AC008749.1-201ENST00000597650 306 ntBASIC2.12□□□□□ -2.07
CCDC180Q9P1Z9 MIR513A1-201ENST00000385138 129 ntBASIC2.11□□□□□ -2.07
CCDC180Q9P1Z9 AC068050.1-201ENST00000394891 380 ntBASIC2.11□□□□□ -2.07
CCDC180Q9P1Z9 SOX2-OT-207ENST00000476964 606 ntTSL 1 (best) BASIC2.11□□□□□ -2.07
CCDC180Q9P1Z9 RN7SKP34-201ENST00000516142 244 ntBASIC2.11□□□□□ -2.07
CCDC180Q9P1Z9 AC097655.1-201ENST00000635075 318 ntBASIC2.11□□□□□ -2.07
CCDC180Q9P1Z9 AC068620.4-201ENST00000636730 1182 ntBASIC2.11□□□□□ -2.07
CCDC180Q9P1Z9 MIR627-201ENST00000384979 97 ntBASIC2.1□□□□□ -2.07
CCDC180Q9P1Z9 FGF12-AS1-201ENST00000414920 580 ntTSL 4 BASIC2.1□□□□□ -2.07
CCDC180Q9P1Z9 LINC02195-201ENST00000443373 294 ntTSL 3 BASIC2.1□□□□□ -2.07
CCDC180Q9P1Z9 LINC02274-201ENST00000555539 1174 ntTSL 1 (best) BASIC2.1□□□□□ -2.07
CCDC180Q9P1Z9 AL096840.1-201ENST00000603287 93 ntBASIC2.1□□□□□ -2.07
CCDC180Q9P1Z9 HMGN2P21-201ENST00000447764 270 ntBASIC2.09□□□□□ -2.07
CCDC180Q9P1Z9 PABPC1P3-201ENST00000469174 459 ntBASIC2.09□□□□□ -2.07
CCDC180Q9P1Z9 AC093852.1-201ENST00000503587 266 ntBASIC2.09□□□□□ -2.07
CCDC180Q9P1Z9 AC020699.1-201ENST00000505161 445 ntBASIC2.09□□□□□ -2.07
CCDC180Q9P1Z9 AP005597.4-201ENST00000526762 229 ntBASIC2.09□□□□□ -2.07
CCDC180Q9P1Z9 RRAS2-210ENST00000534746 993 ntTSL 2 BASIC2.09□□□□□ -2.07
CCDC180Q9P1Z9 AL020996.3-201ENST00000606617 222 ntBASIC2.09□□□□□ -2.07
CCDC180Q9P1Z9 MIR150-201ENST00000385048 84 ntBASIC2.09□□□□□ -2.08
CCDC180Q9P1Z9 AP002784.2-201ENST00000397300 549 ntBASIC2.09□□□□□ -2.08
CCDC180Q9P1Z9 AL512504.1-201ENST00000415494 778 ntBASIC2.09□□□□□ -2.08
CCDC180Q9P1Z9 AC092813.2-201ENST00000434540 399 ntTSL 3 BASIC2.09□□□□□ -2.08
CCDC180Q9P1Z9 AC096745.1-201ENST00000509945 370 ntBASIC2.09□□□□□ -2.08
CCDC180Q9P1Z9 MIR3973-201ENST00000579824 107 ntBASIC2.09□□□□□ -2.08
CCDC180Q9P1Z9 AC243585.2-201ENST00000619099 508 ntTSL 3 BASIC2.09□□□□□ -2.08
CCDC180Q9P1Z9 MT-CO3-201ENST00000362079 784 ntAPPRIS P1 BASIC2.08□□□□□ -2.08
CCDC180Q9P1Z9 HMGN2P16-201ENST00000456802 261 ntBASIC2.08□□□□□ -2.08
CCDC180Q9P1Z9 AC095038.3-201ENST00000634439 195 ntBASIC2.08□□□□□ -2.08
CCDC180Q9P1Z9 RNU4ATAC16P-201ENST00000408512 126 ntBASIC2.07□□□□□ -2.08
CCDC180Q9P1Z9 AL591704.2-201ENST00000421658 181 ntBASIC2.07□□□□□ -2.08
CCDC180Q9P1Z9 AC132825.8-201ENST00000640783 297 ntBASIC2.07□□□□□ -2.08
CCDC180Q9P1Z9 MYSM1-208ENST00000622766 6020 ntTSL 1 (best) BASIC2.07□□□□□ -2.08
CCDC180Q9P1Z9 RNU11-5P-201ENST00000391216 129 ntBASIC2.06□□□□□ -2.08
CCDC180Q9P1Z9 AC073464.3-201ENST00000422564 712 ntBASIC2.06□□□□□ -2.08
CCDC180Q9P1Z9 HMGN2P30-201ENST00000423237 256 ntBASIC2.06□□□□□ -2.08
CCDC180Q9P1Z9 AL050338.1-201ENST00000445585 786 ntTSL 3 BASIC2.06□□□□□ -2.08
CCDC180Q9P1Z9 AL109763.1-201ENST00000455391 461 ntTSL 2 BASIC2.06□□□□□ -2.08
CCDC180Q9P1Z9 MIR6857-201ENST00000613267 93 ntBASIC2.06□□□□□ -2.08
CCDC180Q9P1Z9 AK6-205ENST00000618980 483 ntTSL 2 BASIC2.06□□□□□ -2.08
CCDC180Q9P1Z9 RNU4-42P-201ENST00000364738 142 ntBASIC2.06□□□□□ -2.08
CCDC180Q9P1Z9 AL022400.1-201ENST00000423946 935 ntBASIC2.06□□□□□ -2.08
CCDC180Q9P1Z9 MTND2P2-201ENST00000434633 945 ntBASIC2.06□□□□□ -2.08
CCDC180Q9P1Z9 RNA5SP471-201ENST00000516971 106 ntBASIC2.06□□□□□ -2.08
CCDC180Q9P1Z9 AL161752.1-201ENST00000557721 263 ntTSL 2 BASIC2.06□□□□□ -2.08
CCDC180Q9P1Z9 AL357054.2-201ENST00000607644 423 ntTSL 5 BASIC2.06□□□□□ -2.08
CCDC180Q9P1Z9 CENPK-201ENST00000242872 1576 ntAPPRIS P1 TSL 1 (best) BASIC2.05□□□□□ -2.08
CCDC180Q9P1Z9 RNU1-62P-201ENST00000362599 164 ntBASIC2.05□□□□□ -2.08
CCDC180Q9P1Z9 HMGB1P49-201ENST00000418882 569 ntBASIC2.05□□□□□ -2.08
CCDC180Q9P1Z9 LINC01037-201ENST00000427337 424 ntTSL 5 BASIC2.05□□□□□ -2.08
CCDC180Q9P1Z9 AL583843.1-201ENST00000456070 346 ntBASIC2.05□□□□□ -2.08
CCDC180Q9P1Z9 CA3-AS1-203ENST00000524052 430 ntTSL 2 BASIC2.05□□□□□ -2.08
CCDC180Q9P1Z9 AC113137.1-201ENST00000591869 558 ntTSL 4 BASIC2.05□□□□□ -2.08
CCDC180Q9P1Z9 AL445305.1-201ENST00000432577 575 ntBASIC2.04□□□□□ -2.08
CCDC180Q9P1Z9 GDI2P2-201ENST00000445131 608 ntBASIC2.04□□□□□ -2.08
CCDC180Q9P1Z9 TBL1XR1-AS1-201ENST00000454723 414 ntTSL 5 BASIC2.04□□□□□ -2.08
CCDC180Q9P1Z9 MRPS17P9-201ENST00000511924 393 ntBASIC2.04□□□□□ -2.08
CCDC180Q9P1Z9 AC135178.6-201ENST00000605314 398 ntBASIC2.04□□□□□ -2.08
CCDC180Q9P1Z9 SNORD114-21-201ENST00000606412 72 ntBASIC2.04□□□□□ -2.08
CCDC180Q9P1Z9 HMGB1P24-202ENST00000615653 685 ntBASIC2.04□□□□□ -2.08
CCDC180Q9P1Z9 AC025048.6-202ENST00000627667 438 ntBASIC2.04□□□□□ -2.08
CCDC180Q9P1Z9 ZNF654-201ENST00000309495 4957 ntAPPRIS P2 TSL 1 (best) BASIC2.04□□□□□ -2.08
CCDC180Q9P1Z9 RNA5SP498-201ENST00000411342 120 ntBASIC2.03□□□□□ -2.08
CCDC180Q9P1Z9 LINC01673-201ENST00000426418 468 ntTSL 3 BASIC2.03□□□□□ -2.08
CCDC180Q9P1Z9 AC096632.1-201ENST00000427395 310 ntBASIC2.03□□□□□ -2.08
CCDC180Q9P1Z9 AC004943.1-202ENST00000558618 503 ntTSL 3 BASIC2.03□□□□□ -2.08
CCDC180Q9P1Z9 AC008083.4-201ENST00000615076 444 ntBASIC2.03□□□□□ -2.08
CCDC180Q9P1Z9 AC025034.1-201ENST00000552778 1711 ntTSL 3 BASIC2.03□□□□□ -2.08
Retrieved 100 of 98,524 protein–RNA pairs in 578 ms