Protein–RNA interactions for Protein: Q9NZQ3

NCKIPSD, NCK-interacting protein with SH3 domain, humanhuman

Predictions only

Length 722 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSDQ9NZQ3 RNU6-797P-201ENST00000363101 109 ntBASIC3.67□□□□□ -1.82
NCKIPSDQ9NZQ3 RNU6-181P-201ENST00000363225 107 ntBASIC3.67□□□□□ -1.82
NCKIPSDQ9NZQ3 Y_RNA.159-201ENST00000363674 87 ntBASIC3.67□□□□□ -1.82
NCKIPSDQ9NZQ3 RNU6-525P-201ENST00000363685 104 ntBASIC3.67□□□□□ -1.82
NCKIPSDQ9NZQ3 RNU6-694P-201ENST00000364071 147 ntBASIC3.67□□□□□ -1.82
NCKIPSDQ9NZQ3 MEIG1-201ENST00000378240 507 ntAPPRIS P1 TSL 2 BASIC3.67□□□□□ -1.82
NCKIPSDQ9NZQ3 MIR483-201ENST00000385070 76 ntBASIC3.67□□□□□ -1.82
NCKIPSDQ9NZQ3 PTMAP5-201ENST00000393073 333 ntBASIC3.67□□□□□ -1.82
NCKIPSDQ9NZQ3 RNU2-71P-201ENST00000411395 189 ntBASIC3.67□□□□□ -1.82
NCKIPSDQ9NZQ3 HMGN1P24-201ENST00000412282 298 ntBASIC3.67□□□□□ -1.82
NCKIPSDQ9NZQ3 AC005482.1-201ENST00000420758 575 ntTSL 4 BASIC3.67□□□□□ -1.82
NCKIPSDQ9NZQ3 LINC02526-201ENST00000424162 419 ntTSL 2 BASIC3.67□□□□□ -1.82
NCKIPSDQ9NZQ3 AC007283.2-201ENST00000424739 197 ntBASIC3.67□□□□□ -1.82
NCKIPSDQ9NZQ3 MTCO1P39-201ENST00000426148 480 ntBASIC3.67□□□□□ -1.82
NCKIPSDQ9NZQ3 AL731563.2-201ENST00000431293 291 ntTSL 5 BASIC3.67□□□□□ -1.82
NCKIPSDQ9NZQ3 LINC01797-202ENST00000433432 765 ntTSL 3 BASIC3.67□□□□□ -1.82
NCKIPSDQ9NZQ3 NDUFB1P1-201ENST00000435191 180 ntBASIC3.67□□□□□ -1.82
NCKIPSDQ9NZQ3 AC004866.2-201ENST00000438285 481 ntBASIC3.67□□□□□ -1.82
NCKIPSDQ9NZQ3 AC097347.1-201ENST00000438499 517 ntTSL 3 BASIC3.67□□□□□ -1.82
NCKIPSDQ9NZQ3 PRDX3P3-201ENST00000447765 522 ntBASIC3.67□□□□□ -1.82
NCKIPSDQ9NZQ3 AC132479.1-201ENST00000449160 144 ntBASIC3.67□□□□□ -1.82
NCKIPSDQ9NZQ3 RPS3AP50-201ENST00000487064 803 ntBASIC3.67□□□□□ -1.82
NCKIPSDQ9NZQ3 AC079467.1-201ENST00000508512 503 ntTSL 3 BASIC3.67□□□□□ -1.82
NCKIPSDQ9NZQ3 AC104619.4-201ENST00000510773 249 ntBASIC3.67□□□□□ -1.82
NCKIPSDQ9NZQ3 AC105914.1-201ENST00000511798 226 ntBASIC3.67□□□□□ -1.82
NCKIPSDQ9NZQ3 ABCA17P-206ENST00000512848 467 ntTSL 2 BASIC3.67□□□□□ -1.82
NCKIPSDQ9NZQ3 Y_RNA.704-201ENST00000516851 102 ntBASIC3.67□□□□□ -1.82
NCKIPSDQ9NZQ3 RNU6-445P-201ENST00000516949 107 ntBASIC3.67□□□□□ -1.82
NCKIPSDQ9NZQ3 AC022679.1-202ENST00000520251 376 ntTSL 3 BASIC3.67□□□□□ -1.82
NCKIPSDQ9NZQ3 AP000790.2-201ENST00000534388 522 ntTSL 3 BASIC3.67□□□□□ -1.82
NCKIPSDQ9NZQ3 AP000462.2-203ENST00000540545 715 ntTSL 5 BASIC3.67□□□□□ -1.82
NCKIPSDQ9NZQ3 ADI1P3-201ENST00000549509 470 ntBASIC3.67□□□□□ -1.82
NCKIPSDQ9NZQ3 AC125611.2-201ENST00000551907 647 ntBASIC3.67□□□□□ -1.82
NCKIPSDQ9NZQ3 AL845331.3-202ENST00000562856 261 ntBASIC3.67□□□□□ -1.82
NCKIPSDQ9NZQ3 HMGB1P33-201ENST00000563485 527 ntBASIC3.67□□□□□ -1.82
NCKIPSDQ9NZQ3 AC008946.1-201ENST00000599756 421 ntTSL 3 BASIC3.67□□□□□ -1.82
NCKIPSDQ9NZQ3 AC011468.4-201ENST00000603942 409 ntBASIC3.67□□□□□ -1.82
NCKIPSDQ9NZQ3 AC121334.2-201ENST00000605387 271 ntBASIC3.67□□□□□ -1.82
NCKIPSDQ9NZQ3 MIR98-201ENST00000606724 119 ntBASIC3.67□□□□□ -1.82
NCKIPSDQ9NZQ3 AL450472.3-201ENST00000615578 367 ntBASIC3.67□□□□□ -1.82
NCKIPSDQ9NZQ3 MIR6130-201ENST00000619419 109 ntBASIC3.67□□□□□ -1.82
NCKIPSDQ9NZQ3 AL159972.1-201ENST00000625150 448 ntBASIC3.67□□□□□ -1.82
NCKIPSDQ9NZQ3 AC073346.2-201ENST00000624724 2058 ntBASIC3.67□□□□□ -1.82
NCKIPSDQ9NZQ3 IQCG-205ENST00000455191 1981 ntAPPRIS P1 TSL 2 BASIC3.67□□□□□ -1.82
NCKIPSDQ9NZQ3 SERPINI2-209ENST00000616363 1769 ntTSL 5 BASIC3.66□□□□□ -1.82
NCKIPSDQ9NZQ3 PAPPA-AS1-201ENST00000445861 2450 ntBASIC3.66□□□□□ -1.82
NCKIPSDQ9NZQ3 MTCO1P12-201ENST00000414273 1543 ntBASIC3.66□□□□□ -1.82
NCKIPSDQ9NZQ3 SEMA3D-201ENST00000284136 6265 ntAPPRIS P1 TSL 5 BASIC3.66□□□□□ -1.82
NCKIPSDQ9NZQ3 LINC01111-201ENST00000518732 1663 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
NCKIPSDQ9NZQ3 RNY4P14-201ENST00000363656 96 ntBASIC3.66□□□□□ -1.82
NCKIPSDQ9NZQ3 RNY4P16-201ENST00000364768 94 ntBASIC3.66□□□□□ -1.82
NCKIPSDQ9NZQ3 RNU6-283P-201ENST00000364788 107 ntBASIC3.66□□□□□ -1.82
NCKIPSDQ9NZQ3 MIR183-201ENST00000384958 110 ntBASIC3.66□□□□□ -1.82
NCKIPSDQ9NZQ3 RN7SKP285-201ENST00000410137 318 ntBASIC3.66□□□□□ -1.82
NCKIPSDQ9NZQ3 AC127391.1-201ENST00000411737 98 ntBASIC3.66□□□□□ -1.82
NCKIPSDQ9NZQ3 ELOCP14-201ENST00000428070 331 ntBASIC3.66□□□□□ -1.82
NCKIPSDQ9NZQ3 TIMM9P3-201ENST00000428659 274 ntBASIC3.66□□□□□ -1.82
NCKIPSDQ9NZQ3 PCDH9-AS1-201ENST00000430861 532 ntTSL 2 BASIC3.66□□□□□ -1.82
NCKIPSDQ9NZQ3 RPL35AP22-201ENST00000436855 335 ntBASIC3.66□□□□□ -1.82
NCKIPSDQ9NZQ3 FTH1P1-201ENST00000437933 532 ntBASIC3.66□□□□□ -1.82
NCKIPSDQ9NZQ3 ELOCP7-201ENST00000439968 331 ntBASIC3.66□□□□□ -1.82
NCKIPSDQ9NZQ3 AL354936.1-201ENST00000441521 649 ntTSL 5 BASIC3.66□□□□□ -1.82
NCKIPSDQ9NZQ3 RPS29P31-201ENST00000446147 164 ntBASIC3.66□□□□□ -1.82
NCKIPSDQ9NZQ3 ZEB1-AS1-204ENST00000450834 576 ntTSL 3 BASIC3.66□□□□□ -1.82
NCKIPSDQ9NZQ3 AC098820.1-201ENST00000453157 512 ntTSL 2 BASIC3.66□□□□□ -1.82
NCKIPSDQ9NZQ3 MTND2P24-201ENST00000453434 806 ntBASIC3.66□□□□□ -1.82
NCKIPSDQ9NZQ3 MTND1P12-201ENST00000455231 147 ntBASIC3.66□□□□□ -1.82
NCKIPSDQ9NZQ3 AC092451.1-201ENST00000480211 153 ntBASIC3.66□□□□□ -1.82
NCKIPSDQ9NZQ3 AC020893.1-201ENST00000502452 580 ntBASIC3.66□□□□□ -1.82
NCKIPSDQ9NZQ3 C4orf33-204ENST00000502887 1126 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
NCKIPSDQ9NZQ3 AC010587.1-201ENST00000505809 469 ntBASIC3.66□□□□□ -1.82
NCKIPSDQ9NZQ3 AC091906.1-201ENST00000511310 391 ntTSL 2 BASIC3.66□□□□□ -1.82
NCKIPSDQ9NZQ3 AC016550.2-202ENST00000511940 581 ntTSL 2 BASIC3.66□□□□□ -1.82
NCKIPSDQ9NZQ3 LINC02315-201ENST00000515218 696 ntTSL 5 BASIC3.66□□□□□ -1.82
NCKIPSDQ9NZQ3 RNA5SP309-201ENST00000516670 106 ntBASIC3.66□□□□□ -1.82
NCKIPSDQ9NZQ3 SPINK7-205ENST00000523535 299 ntTSL 2 BASIC3.66□□□□□ -1.82
NCKIPSDQ9NZQ3 PIGY-201ENST00000527353 217 ntAPPRIS P1 BASIC3.66□□□□□ -1.82
NCKIPSDQ9NZQ3 C11orf1-204ENST00000530214 599 ntTSL 5 BASIC3.66□□□□□ -1.82
NCKIPSDQ9NZQ3 AC079203.2-201ENST00000559867 387 ntTSL 2 BASIC3.66□□□□□ -1.82
NCKIPSDQ9NZQ3 AC015845.1-201ENST00000579285 335 ntTSL 3 BASIC3.66□□□□□ -1.82
NCKIPSDQ9NZQ3 MIR3167-201ENST00000579623 85 ntBASIC3.66□□□□□ -1.82
NCKIPSDQ9NZQ3 AC069061.2-202ENST00000580280 357 ntTSL 3 BASIC3.66□□□□□ -1.82
NCKIPSDQ9NZQ3 COX6CP3-201ENST00000580869 223 ntBASIC3.66□□□□□ -1.82
NCKIPSDQ9NZQ3 AL157938.2-203ENST00000589540 931 ntTSL 5 BASIC3.66□□□□□ -1.82
NCKIPSDQ9NZQ3 TTN-AS1-243ENST00000591867 748 ntTSL 5 BASIC3.66□□□□□ -1.82
NCKIPSDQ9NZQ3 AC022601.1-201ENST00000596954 577 ntTSL 4 BASIC3.66□□□□□ -1.82
NCKIPSDQ9NZQ3 AP000907.4-201ENST00000604143 237 ntBASIC3.66□□□□□ -1.82
NCKIPSDQ9NZQ3 AC007038.2-201ENST00000608095 740 ntBASIC3.66□□□□□ -1.82
NCKIPSDQ9NZQ3 AC004908.2-201ENST00000609090 574 ntBASIC3.66□□□□□ -1.82
NCKIPSDQ9NZQ3 AC096577.2-201ENST00000611455 153 ntBASIC3.66□□□□□ -1.82
NCKIPSDQ9NZQ3 AL133173.2-201ENST00000614270 90 ntBASIC3.66□□□□□ -1.82
NCKIPSDQ9NZQ3 PIGX-211ENST00000639474 777 ntAPPRIS P3 TSL 1 (best) BASIC3.66□□□□□ -1.82
NCKIPSDQ9NZQ3 MBNL1-220ENST00000493459 4205 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
NCKIPSDQ9NZQ3 FAM214A-216ENST00000619572 3548 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
NCKIPSDQ9NZQ3 TAB3P1-202ENST00000452645 1634 ntBASIC3.66□□□□□ -1.82
NCKIPSDQ9NZQ3 PTPN22-211ENST00000538253 3575 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
NCKIPSDQ9NZQ3 RAB3C-201ENST00000282878 8896 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.82
NCKIPSDQ9NZQ3 C6orf10-203ENST00000442822 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC3.65□□□□□ -1.82
NCKIPSDQ9NZQ3 RTN4-208ENST00000404909 4102 ntTSL 1 (best) BASIC3.65□□□□□ -1.82
NCKIPSDQ9NZQ3 SGIP1-206ENST00000435165 3646 ntAPPRIS ALT2 TSL 2 BASIC3.65□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 97 ms