Protein–RNA interactions for Protein: Q9NSE2

CISH, Cytokine-inducible SH2-containing protein, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CISHQ9NSE2 RAC1P7-201ENST00000445367 377 ntBASIC1.88□□□□□ -2.11
CISHQ9NSE2 AC010974.1-201ENST00000450509 374 ntTSL 3 BASIC1.88□□□□□ -2.11
CISHQ9NSE2 RFC5P1-201ENST00000454419 874 ntBASIC1.88□□□□□ -2.11
CISHQ9NSE2 AC026347.1-201ENST00000463255 474 ntTSL 3 BASIC1.88□□□□□ -2.11
CISHQ9NSE2 AC097493.1-201ENST00000463958 372 ntBASIC1.88□□□□□ -2.11
CISHQ9NSE2 RPL21P99-201ENST00000480369 423 ntBASIC1.88□□□□□ -2.11
CISHQ9NSE2 AC116337.1-201ENST00000509680 687 ntBASIC1.88□□□□□ -2.11
CISHQ9NSE2 AC090753.1-201ENST00000522087 331 ntTSL 3 BASIC1.88□□□□□ -2.11
CISHQ9NSE2 AC087623.1-201ENST00000533301 377 ntTSL 3 BASIC1.88□□□□□ -2.11
CISHQ9NSE2 PLCZ1-203ENST00000534932 525 ntTSL 4 BASIC1.88□□□□□ -2.11
CISHQ9NSE2 LINC02165-201ENST00000563061 443 ntTSL 3 BASIC1.88□□□□□ -2.11
CISHQ9NSE2 AC090616.5-201ENST00000581225 299 ntTSL 5 BASIC1.88□□□□□ -2.11
CISHQ9NSE2 AC015688.2-201ENST00000584523 262 ntBASIC1.88□□□□□ -2.11
CISHQ9NSE2 AC105224.1-201ENST00000587055 421 ntBASIC1.88□□□□□ -2.11
CISHQ9NSE2 AC025811.1-201ENST00000604312 472 ntBASIC1.88□□□□□ -2.11
CISHQ9NSE2 AC116312.1-201ENST00000606841 314 ntBASIC1.88□□□□□ -2.11
CISHQ9NSE2 AL589740.1-208ENST00000606913 812 ntTSL 5 BASIC1.88□□□□□ -2.11
CISHQ9NSE2 AL445584.2-201ENST00000614030 616 ntTSL 5 BASIC1.88□□□□□ -2.11
CISHQ9NSE2 AC104307.1-201ENST00000616142 196 ntBASIC1.88□□□□□ -2.11
CISHQ9NSE2 RMST_10.1-201ENST00000616309 154 ntBASIC1.88□□□□□ -2.11
CISHQ9NSE2 CDKN2B-AS_3.1-201ENST00000617587 144 ntBASIC1.88□□□□□ -2.11
CISHQ9NSE2 CCDC30-201ENST00000340612 2664 ntAPPRIS P2 TSL 5 BASIC1.87□□□□□ -2.11
CISHQ9NSE2 FAM133CP-201ENST00000332869 704 ntBASIC1.87□□□□□ -2.11
CISHQ9NSE2 AKAP14-201ENST00000334356 608 ntAPPRIS ALT2 TSL 5 BASIC1.87□□□□□ -2.11
CISHQ9NSE2 RNU6-251P-201ENST00000363235 104 ntBASIC1.87□□□□□ -2.11
CISHQ9NSE2 SNORA6-201ENST00000384033 151 ntBASIC1.87□□□□□ -2.11
CISHQ9NSE2 NPM1P10-201ENST00000398310 865 ntBASIC1.87□□□□□ -2.11
CISHQ9NSE2 AL139098.1-201ENST00000407291 389 ntBASIC1.87□□□□□ -2.11
CISHQ9NSE2 RNU2-15P-201ENST00000410692 191 ntBASIC1.87□□□□□ -2.11
CISHQ9NSE2 RNU6-920P-201ENST00000410926 92 ntBASIC1.87□□□□□ -2.11
CISHQ9NSE2 CCDC82-202ENST00000423339 1878 ntAPPRIS P2 TSL 1 (best) BASIC1.87□□□□□ -2.11
CISHQ9NSE2 AL592447.1-201ENST00000447592 540 ntBASIC1.87□□□□□ -2.11
CISHQ9NSE2 NDUFA5P7-201ENST00000452914 242 ntBASIC1.87□□□□□ -2.11
CISHQ9NSE2 ZBTB8OS-205ENST00000465588 548 ntTSL 2 BASIC1.87□□□□□ -2.11
CISHQ9NSE2 AC034226.1-201ENST00000506429 487 ntTSL 2 BASIC1.87□□□□□ -2.11
CISHQ9NSE2 AC096571.1-202ENST00000506634 735 ntBASIC1.87□□□□□ -2.11
CISHQ9NSE2 AC025524.1-201ENST00000518489 606 ntTSL 4 BASIC1.87□□□□□ -2.11
CISHQ9NSE2 BTF3P12-201ENST00000519620 469 ntBASIC1.87□□□□□ -2.11
CISHQ9NSE2 AC118942.1-201ENST00000529674 1035 ntBASIC1.87□□□□□ -2.11
CISHQ9NSE2 AC008083.3-202ENST00000552063 277 ntTSL 3 BASIC1.87□□□□□ -2.11
CISHQ9NSE2 SETP7-201ENST00000552169 453 ntBASIC1.87□□□□□ -2.11
CISHQ9NSE2 AC104229.1-201ENST00000561364 255 ntBASIC1.87□□□□□ -2.11
CISHQ9NSE2 AC010547.2-201ENST00000568523 409 ntTSL 5 BASIC1.87□□□□□ -2.11
CISHQ9NSE2 AC131274.4-201ENST00000577879 398 ntTSL 3 BASIC1.87□□□□□ -2.11
CISHQ9NSE2 AC011494.1-201ENST00000596454 237 ntBASIC1.87□□□□□ -2.11
CISHQ9NSE2 ZNF788-206ENST00000596883 692 ntTSL 3 BASIC1.87□□□□□ -2.11
CISHQ9NSE2 AC135507.1-201ENST00000607214 561 ntBASIC1.87□□□□□ -2.11
CISHQ9NSE2 AC025594.3-201ENST00000613068 790 ntBASIC1.87□□□□□ -2.11
CISHQ9NSE2 C3orf49-203ENST00000616659 876 ntAPPRIS ALT2 TSL 5 BASIC1.87□□□□□ -2.11
CISHQ9NSE2 AC104820.1-201ENST00000624183 307 ntBASIC1.87□□□□□ -2.11
CISHQ9NSE2 AC010872.1-201ENST00000624225 675 ntBASIC1.87□□□□□ -2.11
CISHQ9NSE2 VPS8-228ENST00000628962 207 ntTSL 5 BASIC1.87□□□□□ -2.11
CISHQ9NSE2 MIR203B-201ENST00000636080 86 ntBASIC1.87□□□□□ -2.11
CISHQ9NSE2 OR5H6-203ENST00000642105 978 ntBASIC1.87□□□□□ -2.11
CISHQ9NSE2 DBF4P1-201ENST00000412976 1892 ntBASIC1.86□□□□□ -2.11
CISHQ9NSE2 SMARCAD1-201ENST00000354268 4912 ntAPPRIS P3 TSL 1 (best) BASIC1.86□□□□□ -2.11
CISHQ9NSE2 GABRA2-209ENST00000510861 3411 ntAPPRIS P1 TSL 5 BASIC1.86□□□□□ -2.11
CISHQ9NSE2 COMMD6-201ENST00000355801 486 ntTSL 2 BASIC1.86□□□□□ -2.11
CISHQ9NSE2 AP002784.2-201ENST00000397300 549 ntBASIC1.86□□□□□ -2.11
CISHQ9NSE2 SEPT2P1-201ENST00000419651 180 ntBASIC1.86□□□□□ -2.11
CISHQ9NSE2 AL356277.2-201ENST00000421318 441 ntTSL 2 BASIC1.86□□□□□ -2.11
CISHQ9NSE2 AC005345.1-201ENST00000431868 217 ntBASIC1.86□□□□□ -2.11
CISHQ9NSE2 USP12PX-201ENST00000432383 1057 ntBASIC1.86□□□□□ -2.11
CISHQ9NSE2 AC024082.2-201ENST00000434771 238 ntBASIC1.86□□□□□ -2.11
CISHQ9NSE2 LINC01594-201ENST00000445083 611 ntTSL 5 BASIC1.86□□□□□ -2.11
CISHQ9NSE2 AL390961.1-201ENST00000446557 319 ntTSL 2 BASIC1.86□□□□□ -2.11
CISHQ9NSE2 AL513422.1-201ENST00000449531 383 ntTSL 2 BASIC1.86□□□□□ -2.11
CISHQ9NSE2 TRGVB-201ENST00000453257 471 ntBASIC1.86□□□□□ -2.11
CISHQ9NSE2 ANKRD26P4-201ENST00000455755 950 ntBASIC1.86□□□□□ -2.11
CISHQ9NSE2 RPL32P14-201ENST00000463196 378 ntBASIC1.86□□□□□ -2.11
CISHQ9NSE2 RPL23AP42-201ENST00000471152 471 ntBASIC1.86□□□□□ -2.11
CISHQ9NSE2 PDCD10-207ENST00000471885 764 ntTSL 5 BASIC1.86□□□□□ -2.11
CISHQ9NSE2 AC104564.1-201ENST00000493028 407 ntBASIC1.86□□□□□ -2.11
CISHQ9NSE2 AC011352.3-201ENST00000505162 593 ntBASIC1.86□□□□□ -2.11
CISHQ9NSE2 LINC01846-201ENST00000505908 651 ntTSL 5 BASIC1.86□□□□□ -2.11
CISHQ9NSE2 COL6A4P2-205ENST00000509855 506 ntBASIC1.86□□□□□ -2.11
CISHQ9NSE2 AC109466.1-211ENST00000519327 496 ntTSL 3 BASIC1.86□□□□□ -2.11
CISHQ9NSE2 EEF1A1P37-201ENST00000522748 715 ntBASIC1.86□□□□□ -2.11
CISHQ9NSE2 AC011509.1-201ENST00000589512 164 ntTSL 3 BASIC1.86□□□□□ -2.11
CISHQ9NSE2 AL355877.2-201ENST00000603670 358 ntBASIC1.86□□□□□ -2.11
CISHQ9NSE2 PIK3C2G-203ENST00000535651 2497 ntTSL 5 BASIC1.86□□□□□ -2.11
CISHQ9NSE2 MTCO1P23-201ENST00000415223 1526 ntBASIC1.86□□□□□ -2.11
CISHQ9NSE2 ANKRD36C-201ENST00000295246 2272 ntTSL 5 BASIC1.86□□□□□ -2.11
CISHQ9NSE2 LRRC6-212ENST00000618342 1754 ntAPPRIS ALT1 TSL 5 BASIC1.85□□□□□ -2.11
CISHQ9NSE2 CFHR4-202ENST00000367416 2178 ntAPPRIS P1 TSL 2 BASIC1.85□□□□□ -2.11
CISHQ9NSE2 ZGRF1-212ENST00000612287 2176 ntTSL 1 (best) BASIC1.85□□□□□ -2.11
CISHQ9NSE2 OR4G11P-202ENST00000642116 1414 ntBASIC1.85□□□□□ -2.11
CISHQ9NSE2 CFH-202ENST00000367429 4127 ntAPPRIS P1 TSL 1 (best) BASIC1.85□□□□□ -2.11
CISHQ9NSE2 DEFB125-201ENST00000382410 587 ntAPPRIS P1 TSL 1 (best) BASIC1.85□□□□□ -2.11
CISHQ9NSE2 SNORA26.9-201ENST00000391322 122 ntBASIC1.85□□□□□ -2.11
CISHQ9NSE2 SNORD23.1-201ENST00000408212 104 ntBASIC1.85□□□□□ -2.11
CISHQ9NSE2 U3.40-201ENST00000408706 208 ntBASIC1.85□□□□□ -2.11
CISHQ9NSE2 RN7SKP284-201ENST00000411002 343 ntBASIC1.85□□□□□ -2.11
CISHQ9NSE2 AL590383.1-201ENST00000428602 75 ntBASIC1.85□□□□□ -2.11
CISHQ9NSE2 TAAR7P-201ENST00000436141 242 ntBASIC1.85□□□□□ -2.11
CISHQ9NSE2 ARF4P4-201ENST00000439608 520 ntBASIC1.85□□□□□ -2.11
CISHQ9NSE2 AC073174.1-201ENST00000444155 415 ntTSL 5 BASIC1.85□□□□□ -2.11
CISHQ9NSE2 AC007677.1-201ENST00000445757 515 ntBASIC1.85□□□□□ -2.11
CISHQ9NSE2 SFTA1P-203ENST00000446372 693 ntTSL 1 (best) BASIC1.85□□□□□ -2.11
CISHQ9NSE2 AL050341.1-201ENST00000447743 313 ntBASIC1.85□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 89.6 ms