Protein–RNA interactions for Protein: Q9NRR5

UBQLN4, Ubiquilin-4, humanhuman

Predictions only

Length 601 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN4Q9NRR5 PTPRQ-209ENST00000616559 8165 ntTSL 5 BASIC1.95□□□□□ -2.1
UBQLN4Q9NRR5 HPGDS-201ENST00000295256 1636 ntAPPRIS P1 TSL 1 (best) BASIC1.95□□□□□ -2.1
UBQLN4Q9NRR5 COMMD6-201ENST00000355801 486 ntTSL 2 BASIC1.94□□□□□ -2.1
UBQLN4Q9NRR5 SUGT1P1-201ENST00000379514 476 ntBASIC1.94□□□□□ -2.1
UBQLN4Q9NRR5 RNU1-52P-201ENST00000384190 164 ntBASIC1.94□□□□□ -2.1
UBQLN4Q9NRR5 SPINK13-201ENST00000398450 509 ntAPPRIS P2 TSL 1 (best) BASIC1.94□□□□□ -2.1
UBQLN4Q9NRR5 AC093382.1-201ENST00000413311 379 ntTSL 5 BASIC1.94□□□□□ -2.1
UBQLN4Q9NRR5 Z98742.3-201ENST00000418637 326 ntBASIC1.94□□□□□ -2.1
UBQLN4Q9NRR5 AC008850.1-201ENST00000427546 362 ntBASIC1.94□□□□□ -2.1
UBQLN4Q9NRR5 AC007919.1-201ENST00000429380 217 ntBASIC1.94□□□□□ -2.1
UBQLN4Q9NRR5 AC091133.1-201ENST00000435491 483 ntTSL 3 BASIC1.94□□□□□ -2.1
UBQLN4Q9NRR5 AL353705.4-201ENST00000449661 238 ntBASIC1.94□□□□□ -2.1
UBQLN4Q9NRR5 AC026410.2-201ENST00000460281 156 ntBASIC1.94□□□□□ -2.1
UBQLN4Q9NRR5 RPS15AP17-201ENST00000470598 390 ntBASIC1.94□□□□□ -2.1
UBQLN4Q9NRR5 ANKRD36B-207ENST00000497329 649 ntTSL 1 (best) BASIC1.94□□□□□ -2.1
UBQLN4Q9NRR5 AC118465.1-201ENST00000513820 1271 ntBASIC1.94□□□□□ -2.1
UBQLN4Q9NRR5 SCARNA17.1-201ENST00000516211 143 ntBASIC1.94□□□□□ -2.1
UBQLN4Q9NRR5 SCARNA17.2-201ENST00000516334 143 ntBASIC1.94□□□□□ -2.1
UBQLN4Q9NRR5 snoZ278.1-201ENST00000517059 112 ntBASIC1.94□□□□□ -2.1
UBQLN4Q9NRR5 NRG1-IT1-202ENST00000521463 742 ntTSL 1 (best) BASIC1.94□□□□□ -2.1
UBQLN4Q9NRR5 AC092745.2-201ENST00000537764 620 ntTSL 3 BASIC1.94□□□□□ -2.1
UBQLN4Q9NRR5 MRPL42-203ENST00000547098 701 ntTSL 3 BASIC1.94□□□□□ -2.1
UBQLN4Q9NRR5 AL133166.1-201ENST00000551040 1034 ntTSL 4 BASIC1.94□□□□□ -2.1
UBQLN4Q9NRR5 LINC02286-201ENST00000552425 285 ntTSL 2 BASIC1.94□□□□□ -2.1
UBQLN4Q9NRR5 AC025917.1-201ENST00000562062 612 ntTSL 3 BASIC1.94□□□□□ -2.1
UBQLN4Q9NRR5 AC122134.1-202ENST00000569111 1201 ntBASIC1.94□□□□□ -2.1
UBQLN4Q9NRR5 AC138915.2-201ENST00000569776 97 ntBASIC1.94□□□□□ -2.1
UBQLN4Q9NRR5 AC009127.3-201ENST00000570531 403 ntBASIC1.94□□□□□ -2.1
UBQLN4Q9NRR5 AC091043.1-201ENST00000579830 453 ntTSL 3 BASIC1.94□□□□□ -2.1
UBQLN4Q9NRR5 MIR4666A-201ENST00000580160 79 ntBASIC1.94□□□□□ -2.1
UBQLN4Q9NRR5 AC124283.4-201ENST00000581815 456 ntBASIC1.94□□□□□ -2.1
UBQLN4Q9NRR5 MIR5002-201ENST00000584713 97 ntBASIC1.94□□□□□ -2.1
UBQLN4Q9NRR5 AC099566.1-211ENST00000595188 737 ntTSL 5 BASIC1.94□□□□□ -2.1
UBQLN4Q9NRR5 AC008162.2-201ENST00000613352 291 ntAPPRIS P1 TSL 3 BASIC1.94□□□□□ -2.1
UBQLN4Q9NRR5 SCARNA17.4-201ENST00000614296 143 ntBASIC1.94□□□□□ -2.1
UBQLN4Q9NRR5 OR8K3-202ENST00000623845 939 ntAPPRIS P1 BASIC1.94□□□□□ -2.1
UBQLN4Q9NRR5 C7orf66-201ENST00000624695 435 ntTSL 2 BASIC1.94□□□□□ -2.1
UBQLN4Q9NRR5 AP000553.5-201ENST00000641933 54 ntBASIC1.94□□□□□ -2.1
UBQLN4Q9NRR5 MTND4P35-201ENST00000604257 1375 ntBASIC1.94□□□□□ -2.1
UBQLN4Q9NRR5 TAB2-205ENST00000538427 4240 ntAPPRIS P1 TSL 5 BASIC1.94□□□□□ -2.1
UBQLN4Q9NRR5 KLRC1-202ENST00000359151 1407 ntAPPRIS P4 TSL 1 (best) BASIC1.93□□□□□ -2.1
UBQLN4Q9NRR5 SCOC-202ENST00000394201 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC1.93□□□□□ -2.1
UBQLN4Q9NRR5 IDE-201ENST00000265986 5877 ntAPPRIS P1 TSL 1 (best) BASIC1.93□□□□□ -2.1
UBQLN4Q9NRR5 PCDH11Y-203ENST00000362095 4220 ntAPPRIS ALT2 TSL 1 (best) BASIC1.93□□□□□ -2.1
UBQLN4Q9NRR5 SPA17-201ENST00000227135 853 ntAPPRIS P1 TSL 1 (best) BASIC1.93□□□□□ -2.1
UBQLN4Q9NRR5 DEFB130A-201ENST00000400079 240 ntAPPRIS P1 TSL 1 (best) BASIC1.93□□□□□ -2.1
UBQLN4Q9NRR5 RSL24D1P4-201ENST00000400938 484 ntBASIC1.93□□□□□ -2.1
UBQLN4Q9NRR5 SNORA3.2-201ENST00000408221 125 ntBASIC1.93□□□□□ -2.1
UBQLN4Q9NRR5 RNU4-72P-201ENST00000410754 173 ntBASIC1.93□□□□□ -2.1
UBQLN4Q9NRR5 DPH3P2-201ENST00000422618 250 ntBASIC1.93□□□□□ -2.1
UBQLN4Q9NRR5 AL035407.1-201ENST00000429211 571 ntBASIC1.93□□□□□ -2.1
UBQLN4Q9NRR5 MTCYBP45-201ENST00000435243 565 ntBASIC1.93□□□□□ -2.1
UBQLN4Q9NRR5 DEFB130B-201ENST00000437818 240 ntAPPRIS P1 TSL 1 (best) BASIC1.93□□□□□ -2.1
UBQLN4Q9NRR5 AC092427.1-201ENST00000439177 601 ntBASIC1.93□□□□□ -2.1
UBQLN4Q9NRR5 GHRL-208ENST00000439975 326 ntTSL 1 (best) BASIC1.93□□□□□ -2.1
UBQLN4Q9NRR5 AL591719.1-201ENST00000444669 744 ntBASIC1.93□□□□□ -2.1
UBQLN4Q9NRR5 AC044781.1-201ENST00000446193 570 ntTSL 3 BASIC1.93□□□□□ -2.1
UBQLN4Q9NRR5 SEPT14P24-201ENST00000447236 180 ntBASIC1.93□□□□□ -2.1
UBQLN4Q9NRR5 RPL39P6-201ENST00000448289 150 ntBASIC1.93□□□□□ -2.1
UBQLN4Q9NRR5 HTR2A-AS1-202ENST00000452352 384 ntTSL 2 BASIC1.93□□□□□ -2.1
UBQLN4Q9NRR5 MRPL42P4-201ENST00000453267 443 ntBASIC1.93□□□□□ -2.1
UBQLN4Q9NRR5 LINC01611-203ENST00000454981 504 ntTSL 3 BASIC1.93□□□□□ -2.1
UBQLN4Q9NRR5 AL139109.1-201ENST00000455491 297 ntBASIC1.93□□□□□ -2.1
UBQLN4Q9NRR5 AC090515.1-201ENST00000465295 476 ntBASIC1.93□□□□□ -2.1
UBQLN4Q9NRR5 AC008427.1-201ENST00000503102 655 ntBASIC1.93□□□□□ -2.1
UBQLN4Q9NRR5 AC010387.1-201ENST00000507526 487 ntTSL 2 BASIC1.93□□□□□ -2.1
UBQLN4Q9NRR5 AC034223.1-201ENST00000511054 599 ntTSL 3 BASIC1.93□□□□□ -2.1
UBQLN4Q9NRR5 AC008549.1-201ENST00000512900 643 ntBASIC1.93□□□□□ -2.1
UBQLN4Q9NRR5 AC025755.1-201ENST00000521306 278 ntBASIC1.93□□□□□ -2.1
UBQLN4Q9NRR5 PLCZ1-203ENST00000534932 525 ntTSL 4 BASIC1.93□□□□□ -2.1
UBQLN4Q9NRR5 CPSF6-207ENST00000551516 234 ntTSL 2 BASIC1.93□□□□□ -2.1
UBQLN4Q9NRR5 AL391261.3-201ENST00000557194 520 ntBASIC1.93□□□□□ -2.1
UBQLN4Q9NRR5 AC131274.4-201ENST00000577879 398 ntTSL 3 BASIC1.93□□□□□ -2.1
UBQLN4Q9NRR5 AL590099.1-201ENST00000615276 138 ntBASIC1.93□□□□□ -2.1
UBQLN4Q9NRR5 MIR6130-201ENST00000619419 109 ntBASIC1.93□□□□□ -2.1
UBQLN4Q9NRR5 C3orf85-208ENST00000622536 925 ntAPPRIS P5 TSL 5 BASIC1.93□□□□□ -2.1
UBQLN4Q9NRR5 AC068057.2-201ENST00000624047 895 ntBASIC1.93□□□□□ -2.1
UBQLN4Q9NRR5 MIR219B-201ENST00000637023 88 ntBASIC1.93□□□□□ -2.1
UBQLN4Q9NRR5 ZBED5-201ENST00000413761 2512 ntAPPRIS P1 TSL 1 (best) BASIC1.93□□□□□ -2.1
UBQLN4Q9NRR5 AC009902.3-201ENST00000606235 2172 ntBASIC1.93□□□□□ -2.1
UBQLN4Q9NRR5 MTND4P1-201ENST00000457501 1466 ntBASIC1.93□□□□□ -2.1
UBQLN4Q9NRR5 WWP1-201ENST00000265428 3362 ntAPPRIS P1 TSL 1 (best) BASIC1.93□□□□□ -2.1
UBQLN4Q9NRR5 CAPS2-203ENST00000393284 3430 ntAPPRIS P1 TSL 1 (best) BASIC1.92□□□□□ -2.1
UBQLN4Q9NRR5 KCNIP4-207ENST00000509207 1301 ntTSL 1 (best) BASIC1.92□□□□□ -2.1
UBQLN4Q9NRR5 MLIP-AS1-201ENST00000434196 1534 ntTSL 2 BASIC1.92□□□□□ -2.1
UBQLN4Q9NRR5 ZNF658B-202ENST00000615961 3375 ntBASIC1.92□□□□□ -2.1
UBQLN4Q9NRR5 Y_RNA.25-201ENST00000362528 102 ntBASIC1.92□□□□□ -2.1
UBQLN4Q9NRR5 SNORA6-201ENST00000384033 151 ntBASIC1.92□□□□□ -2.1
UBQLN4Q9NRR5 MCTS2P-201ENST00000394552 546 ntBASIC1.92□□□□□ -2.1
UBQLN4Q9NRR5 SRIP2-201ENST00000428470 166 ntBASIC1.92□□□□□ -2.1
UBQLN4Q9NRR5 PIGFP3-201ENST00000441918 722 ntBASIC1.92□□□□□ -2.1
UBQLN4Q9NRR5 AC096638.1-201ENST00000444678 216 ntBASIC1.92□□□□□ -2.1
UBQLN4Q9NRR5 IFNA11P-201ENST00000446352 526 ntBASIC1.92□□□□□ -2.1
UBQLN4Q9NRR5 AL353718.1-201ENST00000451028 517 ntBASIC1.92□□□□□ -2.1
UBQLN4Q9NRR5 AL391704.1-202ENST00000453889 874 ntTSL 3 BASIC1.92□□□□□ -2.1
UBQLN4Q9NRR5 AP1S2P1-201ENST00000457344 379 ntBASIC1.92□□□□□ -2.1
UBQLN4Q9NRR5 AC108734.3-201ENST00000481241 1165 ntBASIC1.92□□□□□ -2.1
UBQLN4Q9NRR5 AC004917.1-201ENST00000490856 575 ntTSL 4 BASIC1.92□□□□□ -2.1
UBQLN4Q9NRR5 NDUFB4P2-201ENST00000509515 391 ntBASIC1.92□□□□□ -2.1
UBQLN4Q9NRR5 AC104232.2-201ENST00000519680 769 ntTSL 5 BASIC1.92□□□□□ -2.1
Retrieved 100 of 98,524 protein–RNA pairs in 118.2 ms