Protein–RNA interactions for Protein: Q9NP77

SSU72, RNA polymerase II subunit A C-terminal domain phosphatase SSU72, humanhuman

Known RBP Predictions only

Length 194 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSU72Q9NP77 ETV1-205ENST00000405192 4402 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
SSU72Q9NP77 FAM169A-203ENST00000510496 5810 ntTSL 5 BASIC4.7□□□□□ -1.66
SSU72Q9NP77 SPAG5-AS1-202ENST00000424210 1551 ntTSL 2 BASIC4.7□□□□□ -1.66
SSU72Q9NP77 STAG2-204ENST00000371157 5991 ntAPPRIS P3 TSL 1 (best) BASIC4.7□□□□□ -1.66
SSU72Q9NP77 GABRA3-201ENST00000370314 3712 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
SSU72Q9NP77 PRO1804-201ENST00000623780 2050 ntBASIC4.7□□□□□ -1.66
SSU72Q9NP77 C5orf63-205ENST00000535381 5680 ntTSL 3 BASIC4.7□□□□□ -1.66
SSU72Q9NP77 SNURFL-201ENST00000309296 343 ntBASIC4.7□□□□□ -1.66
SSU72Q9NP77 RNU6-1249P-201ENST00000363237 111 ntBASIC4.7□□□□□ -1.66
SSU72Q9NP77 Y_RNA.518-201ENST00000384552 113 ntBASIC4.7□□□□□ -1.66
SSU72Q9NP77 Y_RNA.551-201ENST00000384661 102 ntBASIC4.7□□□□□ -1.66
SSU72Q9NP77 MIR1302-6-201ENST00000408466 90 ntBASIC4.7□□□□□ -1.66
SSU72Q9NP77 U3.42-201ENST00000408746 214 ntBASIC4.7□□□□□ -1.66
SSU72Q9NP77 RPL24P2-201ENST00000421023 475 ntBASIC4.7□□□□□ -1.66
SSU72Q9NP77 RPS27AP12-201ENST00000429552 465 ntBASIC4.7□□□□□ -1.66
SSU72Q9NP77 LINC02264-201ENST00000442020 576 ntTSL 3 BASIC4.7□□□□□ -1.66
SSU72Q9NP77 PRDX3P3-201ENST00000447765 522 ntBASIC4.7□□□□□ -1.66
SSU72Q9NP77 RPL23AP56-201ENST00000460778 453 ntBASIC4.7□□□□□ -1.66
SSU72Q9NP77 RN7SL741P-201ENST00000482473 289 ntBASIC4.7□□□□□ -1.66
SSU72Q9NP77 AC138965.1-202ENST00000502354 547 ntTSL 5 BASIC4.7□□□□□ -1.66
SSU72Q9NP77 LINC02513-201ENST00000503465 500 ntTSL 2 BASIC4.7□□□□□ -1.66
SSU72Q9NP77 AC140125.3-201ENST00000505248 547 ntTSL 4 BASIC4.7□□□□□ -1.66
SSU72Q9NP77 AC113155.1-201ENST00000511141 769 ntBASIC4.7□□□□□ -1.66
SSU72Q9NP77 SNORA25.11-201ENST00000515935 105 ntBASIC4.7□□□□□ -1.66
SSU72Q9NP77 RNU6-1023P-201ENST00000516137 106 ntBASIC4.7□□□□□ -1.66
SSU72Q9NP77 AC008694.2-201ENST00000517591 306 ntBASIC4.7□□□□□ -1.66
SSU72Q9NP77 AC007991.1-201ENST00000522680 631 ntBASIC4.7□□□□□ -1.66
SSU72Q9NP77 AC005363.1-201ENST00000530779 351 ntBASIC4.7□□□□□ -1.66
SSU72Q9NP77 AC069240.1-201ENST00000548774 375 ntBASIC4.7□□□□□ -1.66
SSU72Q9NP77 BNIP3P5-201ENST00000562290 498 ntBASIC4.7□□□□□ -1.66
SSU72Q9NP77 MIR5699-201ENST00000578903 90 ntBASIC4.7□□□□□ -1.66
SSU72Q9NP77 AC010271.1-201ENST00000599050 558 ntTSL 4 BASIC4.7□□□□□ -1.66
SSU72Q9NP77 MIR99AHG-211ENST00000602323 475 ntTSL 5 BASIC4.7□□□□□ -1.66
SSU72Q9NP77 AL591516.1-201ENST00000611326 274 ntBASIC4.7□□□□□ -1.66
SSU72Q9NP77 ATP13A3-211ENST00000619199 5227 ntTSL 2 BASIC4.7□□□□□ -1.66
SSU72Q9NP77 EMSY-204ENST00000524490 4015 ntTSL 2 BASIC4.7□□□□□ -1.66
SSU72Q9NP77 ERGIC2-212ENST00000611644 4961 ntTSL 5 BASIC4.7□□□□□ -1.66
SSU72Q9NP77 DLX6-AS1-201ENST00000430027 15364 ntTSL 2 BASIC4.7□□□□□ -1.66
SSU72Q9NP77 KRTAP24-1-201ENST00000340345 1650 ntAPPRIS P1 BASIC4.7□□□□□ -1.66
SSU72Q9NP77 ENKUR-205ENST00000615958 3294 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
SSU72Q9NP77 AC005332.5-201ENST00000591222 2919 ntBASIC4.69□□□□□ -1.66
SSU72Q9NP77 PCDH15-211ENST00000395440 3177 ntTSL 5 BASIC4.69□□□□□ -1.66
SSU72Q9NP77 CDH18-210ENST00000511273 2318 ntTSL 5 BASIC4.69□□□□□ -1.66
SSU72Q9NP77 KATNAL1-201ENST00000380615 7551 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
SSU72Q9NP77 FAM91A3P-201ENST00000456826 2544 ntBASIC4.69□□□□□ -1.66
SSU72Q9NP77 GRIK2-201ENST00000318991 4317 ntTSL 5 BASIC4.69□□□□□ -1.66
SSU72Q9NP77 RNY1P16-201ENST00000363063 111 ntBASIC4.69□□□□□ -1.66
SSU72Q9NP77 RNA5SP428-201ENST00000365129 132 ntBASIC4.69□□□□□ -1.66
SSU72Q9NP77 AKAP14-204ENST00000371431 977 ntAPPRIS P3 TSL 1 (best) BASIC4.69□□□□□ -1.66
SSU72Q9NP77 RNU6-1062P-201ENST00000383908 107 ntBASIC4.69□□□□□ -1.66
SSU72Q9NP77 IGLJ6-201ENST00000390328 70 ntAPPRIS P1 BASIC4.69□□□□□ -1.66
SSU72Q9NP77 AL445529.1-201ENST00000398713 389 ntBASIC4.69□□□□□ -1.66
SSU72Q9NP77 DEFB113-201ENST00000398718 249 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
SSU72Q9NP77 AL160275.2-201ENST00000412010 394 ntBASIC4.69□□□□□ -1.66
SSU72Q9NP77 AF015720.1-201ENST00000412240 349 ntTSL 3 BASIC4.69□□□□□ -1.66
SSU72Q9NP77 AC073257.2-201ENST00000413991 528 ntTSL 3 BASIC4.69□□□□□ -1.66
SSU72Q9NP77 AL158835.2-201ENST00000430970 300 ntTSL 2 BASIC4.69□□□□□ -1.66
SSU72Q9NP77 MACC1-AS1-201ENST00000439285 639 ntTSL 3 BASIC4.69□□□□□ -1.66
SSU72Q9NP77 AL590664.1-201ENST00000448065 339 ntBASIC4.69□□□□□ -1.66
SSU72Q9NP77 FCF1P4-201ENST00000448326 183 ntBASIC4.69□□□□□ -1.66
SSU72Q9NP77 AL389915.2-201ENST00000454576 441 ntBASIC4.69□□□□□ -1.66
SSU72Q9NP77 RPL23AP2-201ENST00000471227 466 ntBASIC4.69□□□□□ -1.66
SSU72Q9NP77 FO393415.2-201ENST00000480085 343 ntBASIC4.69□□□□□ -1.66
SSU72Q9NP77 SUMO2P6-201ENST00000505273 288 ntBASIC4.69□□□□□ -1.66
SSU72Q9NP77 AC093297.2-204ENST00000508945 295 ntTSL 3 BASIC4.69□□□□□ -1.66
SSU72Q9NP77 AC025465.3-201ENST00000510570 311 ntBASIC4.69□□□□□ -1.66
SSU72Q9NP77 FTH1P9-201ENST00000513251 355 ntBASIC4.69□□□□□ -1.66
SSU72Q9NP77 AC010255.3-204ENST00000514637 454 ntTSL 2 BASIC4.69□□□□□ -1.66
SSU72Q9NP77 SNHG1-204ENST00000537068 629 ntTSL 5 BASIC4.69□□□□□ -1.66
SSU72Q9NP77 SOX5-AS1-201ENST00000539583 573 ntTSL 4 BASIC4.69□□□□□ -1.66
SSU72Q9NP77 AC126177.3-201ENST00000551839 688 ntBASIC4.69□□□□□ -1.66
SSU72Q9NP77 AL512791.1-201ENST00000555853 300 ntTSL 3 BASIC4.69□□□□□ -1.66
SSU72Q9NP77 AC126323.6-201ENST00000561701 451 ntTSL 3 BASIC4.69□□□□□ -1.66
SSU72Q9NP77 AC090517.1-201ENST00000569307 266 ntBASIC4.69□□□□□ -1.66
SSU72Q9NP77 LINC02079-201ENST00000582518 294 ntTSL 2 BASIC4.69□□□□□ -1.66
SSU72Q9NP77 AC091178.1-203ENST00000584586 279 ntBASIC4.69□□□□□ -1.66
SSU72Q9NP77 AC104534.1-201ENST00000594558 566 ntTSL 4 BASIC4.69□□□□□ -1.66
SSU72Q9NP77 AC103858.2-201ENST00000621471 543 ntBASIC4.69□□□□□ -1.66
SSU72Q9NP77 CYP3A43-217ENST00000631161 328 ntTSL 5 BASIC4.69□□□□□ -1.66
SSU72Q9NP77 MECOM-219ENST00000628990 4835 ntAPPRIS P3 TSL 1 (best) BASIC4.69□□□□□ -1.66
SSU72Q9NP77 VPS13C-201ENST00000249837 13300 ntAPPRIS P3 TSL 1 (best) BASIC4.69□□□□□ -1.66
SSU72Q9NP77 OR56A3-205ENST00000641905 4595 ntAPPRIS P1 BASIC4.69□□□□□ -1.66
SSU72Q9NP77 EPHA7-202ENST00000369303 6588 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
SSU72Q9NP77 ANK3-202ENST00000355288 3811 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
SSU72Q9NP77 CARF-208ENST00000428585 2513 ntTSL 2 BASIC4.69□□□□□ -1.66
SSU72Q9NP77 CLCA2-201ENST00000370565 4025 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
SSU72Q9NP77 EBAG9-210ENST00000620557 2186 ntAPPRIS P1 TSL 3 BASIC4.68□□□□□ -1.66
SSU72Q9NP77 ZPLD1-202ENST00000466937 1531 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
SSU72Q9NP77 IFI44L-201ENST00000370751 5874 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
SSU72Q9NP77 ZNF780B-202ENST00000434248 8665 ntAPPRIS P1 TSL 5 BASIC4.68□□□□□ -1.66
SSU72Q9NP77 ZNF780B-207ENST00000617676 8664 ntAPPRIS P1 TSL 5 BASIC4.68□□□□□ -1.66
SSU72Q9NP77 RNA5SP132-201ENST00000364725 118 ntBASIC4.68□□□□□ -1.66
SSU72Q9NP77 RNA5SP22-201ENST00000365393 109 ntBASIC4.68□□□□□ -1.66
SSU72Q9NP77 RNA5SP151-201ENST00000365632 117 ntBASIC4.68□□□□□ -1.66
SSU72Q9NP77 Y_RNA.477-201ENST00000384352 108 ntBASIC4.68□□□□□ -1.66
SSU72Q9NP77 MIR621-201ENST00000384919 96 ntBASIC4.68□□□□□ -1.66
SSU72Q9NP77 IGKV5-2-201ENST00000390244 408 ntAPPRIS P1 BASIC4.68□□□□□ -1.66
SSU72Q9NP77 HSPE1P8-201ENST00000406997 288 ntBASIC4.68□□□□□ -1.66
SSU72Q9NP77 RNA5SP178-201ENST00000410380 128 ntBASIC4.68□□□□□ -1.66
SSU72Q9NP77 RPL7AP73-201ENST00000413490 353 ntBASIC4.68□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 136.1 ms