Protein–RNA interactions for Protein: Q9HCM3

KIAA1549, UPF0606 protein KIAA1549, humanhuman

Predictions only

Length 1,950 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KIAA1549Q9HCM3 AL365496.1-201ENST00000426885 215 ntBASIC1.52□□□□□ -2.17
KIAA1549Q9HCM3 OR4K11P-201ENST00000431829 904 ntBASIC1.52□□□□□ -2.17
KIAA1549Q9HCM3 HMGB1P31-201ENST00000437242 427 ntBASIC1.52□□□□□ -2.17
KIAA1549Q9HCM3 AL357052.1-201ENST00000443504 381 ntTSL 3 BASIC1.52□□□□□ -2.17
KIAA1549Q9HCM3 BX248409.1-201ENST00000455497 255 ntBASIC1.52□□□□□ -2.17
KIAA1549Q9HCM3 AC069439.2-201ENST00000496403 789 ntTSL 2 BASIC1.52□□□□□ -2.17
KIAA1549Q9HCM3 GYPA-204ENST00000504786 357 ntTSL 1 (best) BASIC1.52□□□□□ -2.17
KIAA1549Q9HCM3 Y_RNA.673-201ENST00000516306 88 ntBASIC1.52□□□□□ -2.17
KIAA1549Q9HCM3 SNORA25.15-201ENST00000516487 89 ntBASIC1.52□□□□□ -2.17
KIAA1549Q9HCM3 ZNF436-AS1-205ENST00000518600 376 ntTSL 5 BASIC1.52□□□□□ -2.17
KIAA1549Q9HCM3 AC139103.1-201ENST00000534696 1030 ntBASIC1.52□□□□□ -2.17
KIAA1549Q9HCM3 EMP1-206ENST00000537612 505 ntTSL 3 BASIC1.52□□□□□ -2.17
KIAA1549Q9HCM3 AC011773.3-201ENST00000546501 589 ntTSL 3 BASIC1.52□□□□□ -2.17
KIAA1549Q9HCM3 OR6C68-201ENST00000548615 939 ntAPPRIS P1 BASIC1.52□□□□□ -2.17
KIAA1549Q9HCM3 AC079907.1-201ENST00000552707 374 ntTSL 3 BASIC1.52□□□□□ -2.17
KIAA1549Q9HCM3 AL355076.2-202ENST00000553754 574 ntTSL 4 BASIC1.52□□□□□ -2.17
KIAA1549Q9HCM3 AC103810.2-203ENST00000584959 631 ntTSL 5 BASIC1.52□□□□□ -2.17
KIAA1549Q9HCM3 AC091132.5-204ENST00000586348 630 ntTSL 3 BASIC1.52□□□□□ -2.17
KIAA1549Q9HCM3 C3orf49-203ENST00000616659 876 ntAPPRIS ALT2 TSL 5 BASIC1.52□□□□□ -2.17
KIAA1549Q9HCM3 LINC02246-204ENST00000625278 740 ntTSL 5 BASIC1.52□□□□□ -2.17
KIAA1549Q9HCM3 CEP162-201ENST00000257766 5063 ntTSL 1 (best) BASIC1.52□□□□□ -2.17
KIAA1549Q9HCM3 MIR378A-201ENST00000362177 66 ntBASIC1.52□□□□□ -2.17
KIAA1549Q9HCM3 CNIH4-201ENST00000366856 808 ntAPPRIS ALT1 TSL 2 BASIC1.52□□□□□ -2.17
KIAA1549Q9HCM3 MIR525-201ENST00000384978 85 ntBASIC1.52□□□□□ -2.17
KIAA1549Q9HCM3 MRLN-201ENST00000414264 422 ntAPPRIS P2 TSL 1 (best) BASIC1.52□□□□□ -2.17
KIAA1549Q9HCM3 LINC00392-201ENST00000430033 557 ntTSL 3 BASIC1.52□□□□□ -2.17
KIAA1549Q9HCM3 SFTA1P-203ENST00000446372 693 ntTSL 1 (best) BASIC1.52□□□□□ -2.17
KIAA1549Q9HCM3 SNRPGP6-201ENST00000451124 220 ntBASIC1.52□□□□□ -2.17
KIAA1549Q9HCM3 AC104073.1-201ENST00000451988 151 ntBASIC1.52□□□□□ -2.17
KIAA1549Q9HCM3 USP9YP10-201ENST00000454868 628 ntBASIC1.52□□□□□ -2.17
KIAA1549Q9HCM3 LINC02377-201ENST00000500169 450 ntTSL 3 BASIC1.52□□□□□ -2.17
KIAA1549Q9HCM3 SNHG27-202ENST00000507933 491 ntTSL 2 BASIC1.52□□□□□ -2.17
KIAA1549Q9HCM3 AC117532.1-201ENST00000514638 323 ntBASIC1.52□□□□□ -2.17
KIAA1549Q9HCM3 AC011933.3-201ENST00000578226 372 ntTSL 1 (best) BASIC1.52□□□□□ -2.17
KIAA1549Q9HCM3 AC090897.2-201ENST00000581715 130 ntBASIC1.52□□□□□ -2.17
KIAA1549Q9HCM3 AL035411.2-201ENST00000604022 421 ntBASIC1.52□□□□□ -2.17
KIAA1549Q9HCM3 AP000254.1-201ENST00000609934 520 ntBASIC1.52□□□□□ -2.17
KIAA1549Q9HCM3 AC023490.1-202ENST00000620909 820 ntTSL 5 BASIC1.52□□□□□ -2.17
KIAA1549Q9HCM3 BX649567.1-201ENST00000642071 1134 ntBASIC1.52□□□□□ -2.17
KIAA1549Q9HCM3 CR848007.1-201ENST00000442354 1699 ntBASIC1.51□□□□□ -2.17
KIAA1549Q9HCM3 Y_RNA.4-201ENST00000362333 112 ntBASIC1.51□□□□□ -2.17
KIAA1549Q9HCM3 U8.1-201ENST00000362843 134 ntBASIC1.51□□□□□ -2.17
KIAA1549Q9HCM3 EEF1E1-201ENST00000379715 1077 ntAPPRIS P1 TSL 1 (best) BASIC1.51□□□□□ -2.17
KIAA1549Q9HCM3 MCTS2P-201ENST00000394552 546 ntBASIC1.51□□□□□ -2.17
KIAA1549Q9HCM3 AC093157.2-201ENST00000414686 671 ntTSL 5 BASIC1.51□□□□□ -2.17
KIAA1549Q9HCM3 LINC01318-201ENST00000423593 597 ntTSL 4 BASIC1.51□□□□□ -2.17
KIAA1549Q9HCM3 AC004865.1-201ENST00000442276 1003 ntBASIC1.51□□□□□ -2.17
KIAA1549Q9HCM3 AC010789.1-201ENST00000458489 291 ntTSL 5 BASIC1.51□□□□□ -2.17
KIAA1549Q9HCM3 KLRA1P-201ENST00000503499 986 ntBASIC1.51□□□□□ -2.17
KIAA1549Q9HCM3 Y_RNA.676-201ENST00000516393 96 ntBASIC1.51□□□□□ -2.17
KIAA1549Q9HCM3 SCARNA3-201ENST00000517097 143 ntBASIC1.51□□□□□ -2.17
KIAA1549Q9HCM3 AC087808.1-201ENST00000520501 361 ntBASIC1.51□□□□□ -2.17
KIAA1549Q9HCM3 CASP1P1-201ENST00000526345 212 ntBASIC1.51□□□□□ -2.17
KIAA1549Q9HCM3 AC009093.3-203ENST00000565800 121 ntTSL 2 BASIC1.51□□□□□ -2.17
KIAA1549Q9HCM3 AC106796.1-201ENST00000577173 615 ntTSL 3 BASIC1.51□□□□□ -2.17
KIAA1549Q9HCM3 MIR5571-201ENST00000577998 113 ntBASIC1.51□□□□□ -2.17
KIAA1549Q9HCM3 MIR3935-201ENST00000583472 104 ntBASIC1.51□□□□□ -2.17
KIAA1549Q9HCM3 MIR3117-201ENST00000584034 78 ntBASIC1.51□□□□□ -2.17
KIAA1549Q9HCM3 AC063944.1-210ENST00000593837 519 ntTSL 5 BASIC1.51□□□□□ -2.17
KIAA1549Q9HCM3 SEC63P2-201ENST00000503863 1939 ntBASIC1.51□□□□□ -2.17
KIAA1549Q9HCM3 AC009902.3-201ENST00000606235 2172 ntBASIC1.51□□□□□ -2.17
KIAA1549Q9HCM3 MDM2-203ENST00000299252 966 ntTSL 1 (best) BASIC1.5□□□□□ -2.17
KIAA1549Q9HCM3 AL139276.1-201ENST00000311910 1001 ntBASIC1.5□□□□□ -2.17
KIAA1549Q9HCM3 SNORA27.3-201ENST00000364937 134 ntBASIC1.5□□□□□ -2.17
KIAA1549Q9HCM3 SNORD82-201ENST00000365530 70 ntBASIC1.5□□□□□ -2.17
KIAA1549Q9HCM3 RPS3AP9-201ENST00000417027 792 ntBASIC1.5□□□□□ -2.17
KIAA1549Q9HCM3 MTND4P24-201ENST00000424002 397 ntBASIC1.5□□□□□ -2.17
KIAA1549Q9HCM3 AL158840.1-202ENST00000425754 694 ntTSL 3 BASIC1.5□□□□□ -2.17
KIAA1549Q9HCM3 RPL7L1P10-201ENST00000427790 463 ntBASIC1.5□□□□□ -2.17
KIAA1549Q9HCM3 AL139118.1-201ENST00000432707 446 ntTSL 3 BASIC1.5□□□□□ -2.17
KIAA1549Q9HCM3 MTCYBP45-201ENST00000435243 565 ntBASIC1.5□□□□□ -2.17
KIAA1549Q9HCM3 AC096666.1-201ENST00000454965 348 ntTSL 3 BASIC1.5□□□□□ -2.17
KIAA1549Q9HCM3 AL359385.1-201ENST00000456509 365 ntBASIC1.5□□□□□ -2.17
KIAA1549Q9HCM3 CHRM3-AS2-203ENST00000458325 895 ntTSL 2 BASIC1.5□□□□□ -2.17
KIAA1549Q9HCM3 RPS27P26-201ENST00000494583 239 ntBASIC1.5□□□□□ -2.17
KIAA1549Q9HCM3 ANKRD36B-207ENST00000497329 649 ntTSL 1 (best) BASIC1.5□□□□□ -2.17
KIAA1549Q9HCM3 HMGB3P3-201ENST00000510526 400 ntBASIC1.5□□□□□ -2.17
KIAA1549Q9HCM3 PIH1D2-206ENST00000528775 1025 ntTSL 5 BASIC1.5□□□□□ -2.17
KIAA1549Q9HCM3 AC104009.1-203ENST00000531304 571 ntTSL 4 BASIC1.5□□□□□ -2.17
KIAA1549Q9HCM3 AC004217.3-201ENST00000551552 878 ntBASIC1.5□□□□□ -2.17
KIAA1549Q9HCM3 DNAJC19P9-201ENST00000555084 351 ntBASIC1.5□□□□□ -2.17
KIAA1549Q9HCM3 TIMM9-208ENST00000556007 746 ntTSL 3 BASIC1.5□□□□□ -2.17
KIAA1549Q9HCM3 AC105224.1-201ENST00000587055 421 ntBASIC1.5□□□□□ -2.17
KIAA1549Q9HCM3 AC012493.3-201ENST00000604494 112 ntBASIC1.5□□□□□ -2.17
KIAA1549Q9HCM3 AC016542.1-201ENST00000608259 493 ntBASIC1.5□□□□□ -2.17
KIAA1549Q9HCM3 AC005332.10-201ENST00000612725 619 ntBASIC1.5□□□□□ -2.17
KIAA1549Q9HCM3 AC009318.4-201ENST00000620496 486 ntBASIC1.5□□□□□ -2.17
KIAA1549Q9HCM3 KIAA1107-201ENST00000370378 4622 ntTSL 5 BASIC1.5□□□□□ -2.17
KIAA1549Q9HCM3 MTND4P27-201ENST00000450813 1354 ntBASIC1.5□□□□□ -2.17
KIAA1549Q9HCM3 RNU6-661P-201ENST00000362409 107 ntBASIC1.5□□□□□ -2.17
KIAA1549Q9HCM3 RNU6-989P-201ENST00000362756 107 ntBASIC1.5□□□□□ -2.17
KIAA1549Q9HCM3 RNU6-252P-201ENST00000363232 107 ntBASIC1.5□□□□□ -2.17
KIAA1549Q9HCM3 SNORA38-201ENST00000363946 132 ntBASIC1.5□□□□□ -2.17
KIAA1549Q9HCM3 SNORA68.1-201ENST00000364537 132 ntBASIC1.5□□□□□ -2.17
KIAA1549Q9HCM3 AP1B1P2-201ENST00000416196 106 ntBASIC1.5□□□□□ -2.17
KIAA1549Q9HCM3 GNGT1-202ENST00000428834 731 ntTSL 3 BASIC1.5□□□□□ -2.17
KIAA1549Q9HCM3 DIAPH3-AS1-203ENST00000435636 467 ntTSL 2 BASIC1.5□□□□□ -2.17
KIAA1549Q9HCM3 RPL35AP22-201ENST00000436855 335 ntBASIC1.5□□□□□ -2.17
KIAA1549Q9HCM3 AL354936.1-201ENST00000441521 649 ntTSL 5 BASIC1.5□□□□□ -2.17
KIAA1549Q9HCM3 RAB11AP1-201ENST00000442978 646 ntBASIC1.5□□□□□ -2.17
Retrieved 100 of 98,524 protein–RNA pairs in 111.1 ms