Protein–RNA interactions for Protein: Q9HAW0

BRF2, Transcription factor IIIB 50 kDa subunit, humanhuman

Predictions only

Length 419 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRF2Q9HAW0 AGL-206ENST00000370165 7106 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
BRF2Q9HAW0 TOP2A-201ENST00000423485 5758 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
BRF2Q9HAW0 ROCK1P1-203ENST00000608049 2457 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
BRF2Q9HAW0 RNU6-641P-201ENST00000384006 107 ntBASIC3.41□□□□□ -1.86
BRF2Q9HAW0 U8.11-201ENST00000384699 133 ntBASIC3.41□□□□□ -1.86
BRF2Q9HAW0 U8.12-201ENST00000384701 133 ntBASIC3.41□□□□□ -1.86
BRF2Q9HAW0 SNORD116-4-201ENST00000384733 96 ntBASIC3.41□□□□□ -1.86
BRF2Q9HAW0 AC239803.1-203ENST00000411978 452 ntTSL 2 BASIC3.41□□□□□ -1.86
BRF2Q9HAW0 AC008440.2-201ENST00000413496 423 ntTSL 5 BASIC3.41□□□□□ -1.86
BRF2Q9HAW0 AC068533.1-201ENST00000418542 415 ntBASIC3.41□□□□□ -1.86
BRF2Q9HAW0 AC106873.1-201ENST00000420664 459 ntTSL 3 BASIC3.41□□□□□ -1.86
BRF2Q9HAW0 AC133104.1-201ENST00000429100 218 ntBASIC3.41□□□□□ -1.86
BRF2Q9HAW0 AL158071.1-201ENST00000430315 461 ntBASIC3.41□□□□□ -1.86
BRF2Q9HAW0 AC091390.1-201ENST00000433904 331 ntBASIC3.41□□□□□ -1.86
BRF2Q9HAW0 AC112518.1-201ENST00000436089 575 ntTSL 4 BASIC3.41□□□□□ -1.86
BRF2Q9HAW0 HIGD1AP11-201ENST00000438361 280 ntBASIC3.41□□□□□ -1.86
BRF2Q9HAW0 PIGFP3-201ENST00000441918 722 ntBASIC3.41□□□□□ -1.86
BRF2Q9HAW0 LINC01810-201ENST00000450397 411 ntTSL 3 BASIC3.41□□□□□ -1.86
BRF2Q9HAW0 AC131571.1-202ENST00000454509 598 ntTSL 4 BASIC3.41□□□□□ -1.86
BRF2Q9HAW0 AL445465.2-201ENST00000455530 461 ntTSL 2 BASIC3.41□□□□□ -1.86
BRF2Q9HAW0 U8.18-201ENST00000459285 133 ntBASIC3.41□□□□□ -1.86
BRF2Q9HAW0 AC079943.2-201ENST00000488999 716 ntTSL 3 BASIC3.41□□□□□ -1.86
BRF2Q9HAW0 FCF1P3-201ENST00000496394 590 ntBASIC3.41□□□□□ -1.86
BRF2Q9HAW0 LINC02377-201ENST00000500169 450 ntTSL 3 BASIC3.41□□□□□ -1.86
BRF2Q9HAW0 HMGN1P11-201ENST00000508668 303 ntBASIC3.41□□□□□ -1.86
BRF2Q9HAW0 AC010255.3-204ENST00000514637 454 ntTSL 2 BASIC3.41□□□□□ -1.86
BRF2Q9HAW0 RNU6-1092P-201ENST00000516955 87 ntBASIC3.41□□□□□ -1.86
BRF2Q9HAW0 SNHG1-210ENST00000539303 240 ntTSL 3 BASIC3.41□□□□□ -1.86
BRF2Q9HAW0 AC026333.2-201ENST00000542164 106 ntBASIC3.41□□□□□ -1.86
BRF2Q9HAW0 HIGD1AP1-201ENST00000550979 275 ntBASIC3.41□□□□□ -1.86
BRF2Q9HAW0 AL139317.3-202ENST00000555689 528 ntTSL 5 BASIC3.41□□□□□ -1.86
BRF2Q9HAW0 BLOC1S6-206ENST00000564765 706 ntTSL 4 BASIC3.41□□□□□ -1.86
BRF2Q9HAW0 AMZ2P1-203ENST00000565833 850 ntBASIC3.41□□□□□ -1.86
BRF2Q9HAW0 AC003687.1-201ENST00000578040 427 ntTSL 3 BASIC3.41□□□□□ -1.86
BRF2Q9HAW0 MIR3167-201ENST00000579623 85 ntBASIC3.41□□□□□ -1.86
BRF2Q9HAW0 MIR4425-201ENST00000580572 84 ntBASIC3.41□□□□□ -1.86
BRF2Q9HAW0 MIR4697-201ENST00000582977 78 ntBASIC3.41□□□□□ -1.86
BRF2Q9HAW0 VN1R85P-201ENST00000601587 426 ntBASIC3.41□□□□□ -1.86
BRF2Q9HAW0 AL136363.2-201ENST00000604173 851 ntBASIC3.41□□□□□ -1.86
BRF2Q9HAW0 MACROD2-IT1-202ENST00000605675 575 ntTSL 5 BASIC3.41□□□□□ -1.86
BRF2Q9HAW0 AC107294.1-201ENST00000609524 467 ntBASIC3.41□□□□□ -1.86
BRF2Q9HAW0 AC099842.1-201ENST00000619919 596 ntBASIC3.41□□□□□ -1.86
BRF2Q9HAW0 MIR6810-201ENST00000622701 70 ntBASIC3.41□□□□□ -1.86
BRF2Q9HAW0 EVI2A-201ENST00000247270 1860 ntAPPRIS P3 TSL 2 BASIC3.41□□□□□ -1.86
BRF2Q9HAW0 PICALM-209ENST00000528398 2049 ntTSL 2 BASIC3.41□□□□□ -1.86
BRF2Q9HAW0 ATM-203ENST00000452508 12954 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
BRF2Q9HAW0 POSTN-203ENST00000379747 3373 ntAPPRIS P3 TSL 1 (best) BASIC3.4□□□□□ -1.86
BRF2Q9HAW0 RAPGEF6-210ENST00000512052 3535 ntTSL 2 BASIC3.4□□□□□ -1.86
BRF2Q9HAW0 PWAR6-201ENST00000552334 4618 ntBASIC3.4□□□□□ -1.86
BRF2Q9HAW0 KNTC1-204ENST00000436959 2412 ntTSL 2 BASIC3.4□□□□□ -1.86
BRF2Q9HAW0 AC073343.1-201ENST00000328239 651 ntBASIC3.4□□□□□ -1.87
BRF2Q9HAW0 ZBTB8OS-201ENST00000341885 312 ntTSL 1 (best) BASIC3.4□□□□□ -1.87
BRF2Q9HAW0 DPPA3-201ENST00000345088 1079 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.87
BRF2Q9HAW0 MT-CYB-201ENST00000361789 1141 ntAPPRIS P1 BASIC3.4□□□□□ -1.87
BRF2Q9HAW0 RN7SKP280-201ENST00000364196 304 ntBASIC3.4□□□□□ -1.87
BRF2Q9HAW0 RNA5SP51-201ENST00000364750 119 ntBASIC3.4□□□□□ -1.87
BRF2Q9HAW0 RNU5E-6P-201ENST00000365574 115 ntBASIC3.4□□□□□ -1.87
BRF2Q9HAW0 TSHB-202ENST00000369517 474 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.87
BRF2Q9HAW0 RNU6-1035P-201ENST00000384477 107 ntBASIC3.4□□□□□ -1.87
BRF2Q9HAW0 Y_RNA.582-201ENST00000391023 95 ntBASIC3.4□□□□□ -1.87
BRF2Q9HAW0 RNU6-817P-201ENST00000391083 104 ntBASIC3.4□□□□□ -1.87
BRF2Q9HAW0 MTND3P17-201ENST00000416968 344 ntBASIC3.4□□□□□ -1.87
BRF2Q9HAW0 AC012498.1-201ENST00000424037 437 ntBASIC3.4□□□□□ -1.87
BRF2Q9HAW0 AC017074.1-201ENST00000424612 561 ntTSL 3 BASIC3.4□□□□□ -1.87
BRF2Q9HAW0 ZNF863P-201ENST00000426746 417 ntBASIC3.4□□□□□ -1.87
BRF2Q9HAW0 HMGB3P11-201ENST00000440127 604 ntBASIC3.4□□□□□ -1.87
BRF2Q9HAW0 AC004691.1-201ENST00000440376 547 ntTSL 3 BASIC3.4□□□□□ -1.87
BRF2Q9HAW0 BNIP3P2-201ENST00000441221 577 ntBASIC3.4□□□□□ -1.87
BRF2Q9HAW0 AL357552.1-201ENST00000445254 415 ntBASIC3.4□□□□□ -1.87
BRF2Q9HAW0 ITGA9-AS1-208ENST00000449586 726 ntTSL 3 BASIC3.4□□□□□ -1.87
BRF2Q9HAW0 OFD1P4Y-201ENST00000455273 1179 ntBASIC3.4□□□□□ -1.87
BRF2Q9HAW0 CDKN3-205ENST00000458126 845 ntAPPRIS ALT2 TSL 5 BASIC3.4□□□□□ -1.87
BRF2Q9HAW0 SNORD105B-201ENST00000458770 79 ntBASIC3.4□□□□□ -1.87
BRF2Q9HAW0 C1orf112-206ENST00000472795 925 ntAPPRIS ALT2 TSL 2 BASIC3.4□□□□□ -1.87
BRF2Q9HAW0 KC877373.1-201ENST00000479066 408 ntBASIC3.4□□□□□ -1.87
BRF2Q9HAW0 AC113145.1-201ENST00000522408 412 ntTSL 5 BASIC3.4□□□□□ -1.87
BRF2Q9HAW0 AC006518.2-202ENST00000544947 297 ntTSL 2 BASIC3.4□□□□□ -1.87
BRF2Q9HAW0 AC245505.1-201ENST00000556398 224 ntBASIC3.4□□□□□ -1.87
BRF2Q9HAW0 TGIF1P1-201ENST00000558095 802 ntBASIC3.4□□□□□ -1.87
BRF2Q9HAW0 AC009558.1-201ENST00000561174 581 ntTSL 4 BASIC3.4□□□□□ -1.87
BRF2Q9HAW0 AL845331.3-202ENST00000562856 261 ntBASIC3.4□□□□□ -1.87
BRF2Q9HAW0 HSPE1P7-201ENST00000604681 321 ntBASIC3.4□□□□□ -1.87
BRF2Q9HAW0 AL136363.1-201ENST00000605349 337 ntBASIC3.4□□□□□ -1.87
BRF2Q9HAW0 AC027045.1-201ENST00000609065 202 ntTSL 5 BASIC3.4□□□□□ -1.87
BRF2Q9HAW0 ZGRF1-212ENST00000612287 2176 ntTSL 1 (best) BASIC3.4□□□□□ -1.87
BRF2Q9HAW0 UBE2Q2P6-201ENST00000612666 153 ntBASIC3.4□□□□□ -1.87
BRF2Q9HAW0 AC034102.8-201ENST00000615146 484 ntBASIC3.4□□□□□ -1.87
BRF2Q9HAW0 AC068831.8-201ENST00000620171 435 ntBASIC3.4□□□□□ -1.87
BRF2Q9HAW0 KIAA1109-203ENST00000388738 15574 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.87
BRF2Q9HAW0 ATP2B1-203ENST00000393164 3127 ntTSL 1 (best) BASIC3.4□□□□□ -1.87
BRF2Q9HAW0 AL161912.2-201ENST00000565707 3007 ntBASIC3.4□□□□□ -1.87
BRF2Q9HAW0 AC005183.1-201ENST00000603687 1979 ntBASIC3.4□□□□□ -1.87
BRF2Q9HAW0 SYTL2-203ENST00000359152 4123 ntAPPRIS ALT1 TSL 1 (best) BASIC3.39□□□□□ -1.87
BRF2Q9HAW0 DCUN1D1-201ENST00000292782 7954 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
BRF2Q9HAW0 UBE2W-203ENST00000517608 8426 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
BRF2Q9HAW0 RNA5SP515-201ENST00000364570 118 ntBASIC3.39□□□□□ -1.87
BRF2Q9HAW0 RNU6-39P-201ENST00000384344 107 ntBASIC3.39□□□□□ -1.87
BRF2Q9HAW0 RNU6-456P-201ENST00000384493 107 ntBASIC3.39□□□□□ -1.87
BRF2Q9HAW0 TRAJ59-201ENST00000390480 54 ntAPPRIS P1 BASIC3.39□□□□□ -1.87
BRF2Q9HAW0 RNU2-66P-201ENST00000410650 161 ntBASIC3.39□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 101.5 ms