Protein–RNA interactions for Protein: Q9H9S3

SEC61A2, Protein transport protein Sec61 subunit alpha isoform 2, humanhuman

Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A2Q9H9S3 PPIAP21-201ENST00000464473 501 ntBASIC4.09□□□□□ -1.75
SEC61A2Q9H9S3 RPL23AP65-201ENST00000475608 468 ntBASIC4.09□□□□□ -1.75
SEC61A2Q9H9S3 AF213884.1-201ENST00000488102 463 ntBASIC4.09□□□□□ -1.75
SEC61A2Q9H9S3 KRTAP5-14P-201ENST00000502328 121 ntBASIC4.09□□□□□ -1.75
SEC61A2Q9H9S3 AC091976.1-202ENST00000509211 630 ntTSL 3 BASIC4.09□□□□□ -1.75
SEC61A2Q9H9S3 RNU6-388P-201ENST00000517012 105 ntBASIC4.09□□□□□ -1.75
SEC61A2Q9H9S3 RNU6-389P-201ENST00000517048 105 ntBASIC4.09□□□□□ -1.75
SEC61A2Q9H9S3 IL7-206ENST00000520269 456 ntTSL 3 BASIC4.09□□□□□ -1.75
SEC61A2Q9H9S3 AC100870.1-201ENST00000522035 505 ntBASIC4.09□□□□□ -1.75
SEC61A2Q9H9S3 OR8R1P-201ENST00000543943 764 ntBASIC4.09□□□□□ -1.75
SEC61A2Q9H9S3 AL929601.2-201ENST00000549951 381 ntTSL 4 BASIC4.09□□□□□ -1.75
SEC61A2Q9H9S3 AC025423.5-201ENST00000550230 219 ntBASIC4.09□□□□□ -1.75
SEC61A2Q9H9S3 AC026371.1-201ENST00000551867 419 ntBASIC4.09□□□□□ -1.75
SEC61A2Q9H9S3 AC128707.1-201ENST00000552230 494 ntTSL 3 BASIC4.09□□□□□ -1.75
SEC61A2Q9H9S3 ATP5J2P6-201ENST00000565203 266 ntBASIC4.09□□□□□ -1.75
SEC61A2Q9H9S3 MIR4330-201ENST00000579077 105 ntBASIC4.09□□□□□ -1.75
SEC61A2Q9H9S3 AC092447.9-201ENST00000603395 144 ntBASIC4.09□□□□□ -1.75
SEC61A2Q9H9S3 IGHV3-29-201ENST00000604817 344 ntBASIC4.09□□□□□ -1.75
SEC61A2Q9H9S3 LINC02112-205ENST00000606744 236 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
SEC61A2Q9H9S3 MIR6748-201ENST00000610433 71 ntBASIC4.09□□□□□ -1.75
SEC61A2Q9H9S3 MIR6820-201ENST00000611508 62 ntBASIC4.09□□□□□ -1.75
SEC61A2Q9H9S3 AC005086.4-201ENST00000623065 213 ntBASIC4.09□□□□□ -1.75
SEC61A2Q9H9S3 AC067931.1-201ENST00000624190 671 ntBASIC4.09□□□□□ -1.75
SEC61A2Q9H9S3 U3.53-201ENST00000628922 216 ntBASIC4.09□□□□□ -1.75
SEC61A2Q9H9S3 TPRG1-201ENST00000345063 5479 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
SEC61A2Q9H9S3 CENPF-201ENST00000366955 10307 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
SEC61A2Q9H9S3 UGT2A3-201ENST00000251566 2965 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
SEC61A2Q9H9S3 VPS13C-202ENST00000261517 13400 ntAPPRIS ALT2 TSL 1 (best) BASIC4.09□□□□□ -1.76
SEC61A2Q9H9S3 PCDH11X-206ENST00000373097 9146 ntAPPRIS ALT2 TSL 1 (best) BASIC4.09□□□□□ -1.76
SEC61A2Q9H9S3 ZNF208-207ENST00000609966 3653 ntTSL 5 BASIC4.09□□□□□ -1.76
SEC61A2Q9H9S3 LINC01094-203ENST00000504675 1985 ntTSL 2 BASIC4.09□□□□□ -1.76
SEC61A2Q9H9S3 NFIB-211ENST00000606230 2311 ntTSL 5 BASIC4.09□□□□□ -1.76
SEC61A2Q9H9S3 TMEM255A-202ENST00000371352 2879 ntTSL 2 BASIC4.08□□□□□ -1.76
SEC61A2Q9H9S3 AC079741.1-201ENST00000321498 212 ntBASIC4.08□□□□□ -1.76
SEC61A2Q9H9S3 AC004057.1-202ENST00000356247 284 ntTSL 3 BASIC4.08□□□□□ -1.76
SEC61A2Q9H9S3 RNU1-20P-201ENST00000363314 162 ntBASIC4.08□□□□□ -1.76
SEC61A2Q9H9S3 RNU6-263P-201ENST00000363811 107 ntBASIC4.08□□□□□ -1.76
SEC61A2Q9H9S3 RNU6-379P-201ENST00000363813 104 ntBASIC4.08□□□□□ -1.76
SEC61A2Q9H9S3 Y_RNA.399-201ENST00000383955 105 ntBASIC4.08□□□□□ -1.76
SEC61A2Q9H9S3 RPS26P47-201ENST00000427219 348 ntBASIC4.08□□□□□ -1.76
SEC61A2Q9H9S3 AL390067.1-201ENST00000440009 420 ntTSL 3 BASIC4.08□□□□□ -1.76
SEC61A2Q9H9S3 AC069285.2-201ENST00000440210 275 ntBASIC4.08□□□□□ -1.76
SEC61A2Q9H9S3 PLCB1-IT1-201ENST00000441231 373 ntTSL 3 BASIC4.08□□□□□ -1.76
SEC61A2Q9H9S3 MTCO3P45-201ENST00000443036 613 ntBASIC4.08□□□□□ -1.76
SEC61A2Q9H9S3 AC011753.3-201ENST00000443436 406 ntBASIC4.08□□□□□ -1.76
SEC61A2Q9H9S3 AC098484.1-201ENST00000447572 484 ntTSL 3 BASIC4.08□□□□□ -1.76
SEC61A2Q9H9S3 AL365271.1-201ENST00000448909 603 ntTSL 3 BASIC4.08□□□□□ -1.76
SEC61A2Q9H9S3 AL162389.1-201ENST00000449233 177 ntBASIC4.08□□□□□ -1.76
SEC61A2Q9H9S3 TH2LCRR-203ENST00000457489 439 ntTSL 3 BASIC4.08□□□□□ -1.76
SEC61A2Q9H9S3 HMGB3P30-201ENST00000457863 606 ntBASIC4.08□□□□□ -1.76
SEC61A2Q9H9S3 AC010326.1-201ENST00000462726 602 ntBASIC4.08□□□□□ -1.76
SEC61A2Q9H9S3 HMGB1P25-201ENST00000468402 607 ntBASIC4.08□□□□□ -1.76
SEC61A2Q9H9S3 OARD1-209ENST00000471367 401 ntTSL 2 BASIC4.08□□□□□ -1.76
SEC61A2Q9H9S3 AC010683.1-201ENST00000473673 378 ntBASIC4.08□□□□□ -1.76
SEC61A2Q9H9S3 RN7SL459P-201ENST00000481078 302 ntBASIC4.08□□□□□ -1.76
SEC61A2Q9H9S3 AC107222.1-201ENST00000510899 637 ntBASIC4.08□□□□□ -1.76
SEC61A2Q9H9S3 HIGD1AP3-201ENST00000515857 278 ntBASIC4.08□□□□□ -1.76
SEC61A2Q9H9S3 SNORD116.3-201ENST00000517176 78 ntBASIC4.08□□□□□ -1.76
SEC61A2Q9H9S3 CDH12P4-201ENST00000517835 295 ntBASIC4.08□□□□□ -1.76
SEC61A2Q9H9S3 CDH12P3-201ENST00000517935 295 ntBASIC4.08□□□□□ -1.76
SEC61A2Q9H9S3 CDH12P1-201ENST00000518435 295 ntBASIC4.08□□□□□ -1.76
SEC61A2Q9H9S3 RRM2B-207ENST00000519962 201 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
SEC61A2Q9H9S3 AC107918.3-201ENST00000533272 382 ntBASIC4.08□□□□□ -1.76
SEC61A2Q9H9S3 AC084880.2-201ENST00000536009 501 ntTSL 3 BASIC4.08□□□□□ -1.76
SEC61A2Q9H9S3 AC091178.1-203ENST00000584586 279 ntBASIC4.08□□□□□ -1.76
SEC61A2Q9H9S3 PSMD5-AS1-203ENST00000589026 525 ntTSL 5 BASIC4.08□□□□□ -1.76
SEC61A2Q9H9S3 PRR13P7-201ENST00000605538 430 ntBASIC4.08□□□□□ -1.76
SEC61A2Q9H9S3 AC015813.4-201ENST00000610469 179 ntBASIC4.08□□□□□ -1.76
SEC61A2Q9H9S3 MIR6780A-201ENST00000615089 68 ntBASIC4.08□□□□□ -1.76
SEC61A2Q9H9S3 U2.1-201ENST00000618978 145 ntBASIC4.08□□□□□ -1.76
SEC61A2Q9H9S3 AC005911.1-201ENST00000619883 456 ntTSL 5 BASIC4.08□□□□□ -1.76
SEC61A2Q9H9S3 AP000346.3-201ENST00000622821 210 ntBASIC4.08□□□□□ -1.76
SEC61A2Q9H9S3 OR9H1P-201ENST00000446393 4888 ntAPPRIS P1 BASIC4.08□□□□□ -1.76
SEC61A2Q9H9S3 CACNB4-257ENST00000637547 7658 ntTSL 5 BASIC4.08□□□□□ -1.76
SEC61A2Q9H9S3 COPS2-202ENST00000388901 6628 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
SEC61A2Q9H9S3 KATNAL1-201ENST00000380615 7551 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
SEC61A2Q9H9S3 ADGRL3-203ENST00000506700 4838 ntTSL 5 BASIC4.07□□□□□ -1.76
SEC61A2Q9H9S3 POU2F1-204ENST00000367866 13905 ntAPPRIS P3 TSL 1 (best) BASIC4.07□□□□□ -1.76
SEC61A2Q9H9S3 ZNF137P-201ENST00000456718 1920 ntBASIC4.07□□□□□ -1.76
SEC61A2Q9H9S3 EIF2AP4-201ENST00000424793 1781 ntBASIC4.07□□□□□ -1.76
SEC61A2Q9H9S3 USP34-201ENST00000398571 11357 ntAPPRIS P1 TSL 5 BASIC4.07□□□□□ -1.76
SEC61A2Q9H9S3 IQCB2P-201ENST00000401788 1633 ntBASIC4.07□□□□□ -1.76
SEC61A2Q9H9S3 HIST1H2BD-201ENST00000289316 789 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
SEC61A2Q9H9S3 AL161668.1-201ENST00000320322 358 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
SEC61A2Q9H9S3 MIR448-201ENST00000362131 111 ntBASIC4.07□□□□□ -1.76
SEC61A2Q9H9S3 CD84-204ENST00000368048 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC4.07□□□□□ -1.76
SEC61A2Q9H9S3 AC019155.1-201ENST00000382242 574 ntBASIC4.07□□□□□ -1.76
SEC61A2Q9H9S3 MIR921-201ENST00000401133 56 ntBASIC4.07□□□□□ -1.76
SEC61A2Q9H9S3 MIR298-201ENST00000401212 88 ntBASIC4.07□□□□□ -1.76
SEC61A2Q9H9S3 Z99755.1-201ENST00000414048 380 ntBASIC4.07□□□□□ -1.76
SEC61A2Q9H9S3 AC099677.1-201ENST00000420575 175 ntBASIC4.07□□□□□ -1.76
SEC61A2Q9H9S3 Z74021.1-201ENST00000423610 407 ntBASIC4.07□□□□□ -1.76
SEC61A2Q9H9S3 AL590783.1-201ENST00000424138 456 ntTSL 2 BASIC4.07□□□□□ -1.76
SEC61A2Q9H9S3 RPS12P10-201ENST00000427031 377 ntBASIC4.07□□□□□ -1.76
SEC61A2Q9H9S3 UTS2B-203ENST00000427544 676 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
SEC61A2Q9H9S3 LINC02095-201ENST00000430908 346 ntTSL 2 BASIC4.07□□□□□ -1.76
SEC61A2Q9H9S3 RPL23AP25-201ENST00000430973 463 ntBASIC4.07□□□□□ -1.76
SEC61A2Q9H9S3 RPL23AP69-201ENST00000431134 458 ntBASIC4.07□□□□□ -1.76
SEC61A2Q9H9S3 ARHGAP26-IT1-201ENST00000433186 388 ntTSL 3 BASIC4.07□□□□□ -1.76
SEC61A2Q9H9S3 CYCSP43-201ENST00000438233 310 ntBASIC4.07□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 98.3 ms