Protein–RNA interactions for Protein: Q9H9A6

LRRC40, Leucine-rich repeat-containing protein 40, humanhuman

Predictions only

Length 602 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC40Q9H9A6 AL136146.2-201ENST00000534594 494 ntTSL 2 BASIC2.61□□□□□ -1.99
LRRC40Q9H9A6 ZKSCAN7P1-201ENST00000543668 673 ntBASIC2.61□□□□□ -1.99
LRRC40Q9H9A6 AC008083.3-201ENST00000547777 329 ntTSL 3 BASIC2.61□□□□□ -1.99
LRRC40Q9H9A6 SLC12A1-210ENST00000561031 735 ntTSL 2 BASIC2.61□□□□□ -1.99
LRRC40Q9H9A6 AP001029.2-202ENST00000588197 739 ntTSL 3 BASIC2.61□□□□□ -1.99
LRRC40Q9H9A6 AF038458.1-201ENST00000588406 262 ntBASIC2.61□□□□□ -1.99
LRRC40Q9H9A6 RPL12P50-201ENST00000603116 116 ntBASIC2.61□□□□□ -1.99
LRRC40Q9H9A6 TUG1_2.1-201ENST00000614234 87 ntBASIC2.61□□□□□ -1.99
LRRC40Q9H9A6 SDR42E1P2-201ENST00000614861 481 ntBASIC2.61□□□□□ -1.99
LRRC40Q9H9A6 AL161782.1-201ENST00000622930 586 ntTSL 3 BASIC2.61□□□□□ -1.99
LRRC40Q9H9A6 AC068057.2-201ENST00000624047 895 ntBASIC2.61□□□□□ -1.99
LRRC40Q9H9A6 PCM1-222ENST00000524226 5955 ntTSL 1 (best) BASIC2.61□□□□□ -1.99
LRRC40Q9H9A6 OXR1-215ENST00000531443 3599 ntTSL 5 BASIC2.61□□□□□ -1.99
LRRC40Q9H9A6 UHMK1-204ENST00000545294 8117 ntTSL 2 BASIC2.6□□□□□ -1.99
LRRC40Q9H9A6 AC092447.10-201ENST00000620607 1652 ntBASIC2.6□□□□□ -1.99
LRRC40Q9H9A6 DENND4A-202ENST00000443035 8665 ntTSL 1 (best) BASIC2.6□□□□□ -1.99
LRRC40Q9H9A6 NEB-203ENST00000397345 26202 ntAPPRIS ALT2 TSL 5 BASIC2.6□□□□□ -1.99
LRRC40Q9H9A6 NEB-209ENST00000427231 26202 ntAPPRIS ALT2 TSL 5 BASIC2.6□□□□□ -1.99
LRRC40Q9H9A6 TEX9-207ENST00000560582 2005 ntTSL 3 BASIC2.6□□□□□ -1.99
LRRC40Q9H9A6 SPINT4-201ENST00000279058 512 ntAPPRIS P1 TSL 1 (best) BASIC2.6□□□□□ -1.99
LRRC40Q9H9A6 OR5J1P-201ENST00000313544 939 ntBASIC2.6□□□□□ -1.99
LRRC40Q9H9A6 MDM4-202ENST00000367180 547 ntTSL 3 BASIC2.6□□□□□ -1.99
LRRC40Q9H9A6 RNU6-413P-201ENST00000384115 107 ntBASIC2.6□□□□□ -1.99
LRRC40Q9H9A6 RNU6-1072P-201ENST00000384703 107 ntBASIC2.6□□□□□ -1.99
LRRC40Q9H9A6 RNU6-443P-201ENST00000384780 107 ntBASIC2.6□□□□□ -1.99
LRRC40Q9H9A6 AC096664.2-201ENST00000411843 406 ntBASIC2.6□□□□□ -1.99
LRRC40Q9H9A6 AC023141.4-201ENST00000412031 328 ntBASIC2.6□□□□□ -1.99
LRRC40Q9H9A6 AC080125.1-201ENST00000414888 684 ntBASIC2.6□□□□□ -1.99
LRRC40Q9H9A6 UBE2FP1-201ENST00000416536 447 ntBASIC2.6□□□□□ -1.99
LRRC40Q9H9A6 HMGB1P49-201ENST00000418882 569 ntBASIC2.6□□□□□ -1.99
LRRC40Q9H9A6 AL109947.1-201ENST00000423747 382 ntTSL 2 BASIC2.6□□□□□ -1.99
LRRC40Q9H9A6 USP9YP11-201ENST00000427537 717 ntBASIC2.6□□□□□ -1.99
LRRC40Q9H9A6 LINC02095-201ENST00000430908 346 ntTSL 2 BASIC2.6□□□□□ -1.99
LRRC40Q9H9A6 AL360169.1-201ENST00000435116 143 ntTSL 5 BASIC2.6□□□□□ -1.99
LRRC40Q9H9A6 LINC00353-201ENST00000435401 685 ntTSL 5 BASIC2.6□□□□□ -1.99
LRRC40Q9H9A6 AC007327.1-201ENST00000447461 264 ntBASIC2.6□□□□□ -1.99
LRRC40Q9H9A6 ZNF886P-201ENST00000450781 723 ntBASIC2.6□□□□□ -1.99
LRRC40Q9H9A6 AL365295.1-201ENST00000454942 514 ntTSL 5 BASIC2.6□□□□□ -1.99
LRRC40Q9H9A6 SNORD109B-201ENST00000458961 67 ntBASIC2.6□□□□□ -1.99
LRRC40Q9H9A6 SNORD109A-201ENST00000459128 67 ntBASIC2.6□□□□□ -1.99
LRRC40Q9H9A6 AC090096.1-201ENST00000489168 390 ntBASIC2.6□□□□□ -1.99
LRRC40Q9H9A6 AL160314.1-201ENST00000490836 438 ntBASIC2.6□□□□□ -1.99
LRRC40Q9H9A6 MEF2C-AS1-208ENST00000512585 741 ntTSL 5 BASIC2.6□□□□□ -1.99
LRRC40Q9H9A6 AC012625.1-201ENST00000515153 625 ntTSL 5 BASIC2.6□□□□□ -1.99
LRRC40Q9H9A6 SNORA31.15-201ENST00000516771 132 ntBASIC2.6□□□□□ -1.99
LRRC40Q9H9A6 AC091163.3-201ENST00000518269 1144 ntBASIC2.6□□□□□ -1.99
LRRC40Q9H9A6 AC084116.3-201ENST00000519123 429 ntTSL 3 BASIC2.6□□□□□ -1.99
LRRC40Q9H9A6 IGHVII-62-1-201ENST00000519283 235 ntBASIC2.6□□□□□ -1.99
LRRC40Q9H9A6 AC022360.2-201ENST00000522390 456 ntTSL 3 BASIC2.6□□□□□ -1.99
LRRC40Q9H9A6 AC243972.3-201ENST00000539655 198 ntBASIC2.6□□□□□ -1.99
LRRC40Q9H9A6 PCED1B-AS1-208ENST00000551898 359 ntTSL 3 BASIC2.6□□□□□ -1.99
LRRC40Q9H9A6 GTF3AP2-201ENST00000557014 266 ntBASIC2.6□□□□□ -1.99
LRRC40Q9H9A6 LINC02109-204ENST00000602801 563 ntTSL 4 BASIC2.6□□□□□ -1.99
LRRC40Q9H9A6 AL356280.1-201ENST00000603614 379 ntBASIC2.6□□□□□ -1.99
LRRC40Q9H9A6 AC013437.2-201ENST00000639587 677 ntBASIC2.6□□□□□ -1.99
LRRC40Q9H9A6 NETO1-202ENST00000397929 1849 ntTSL 1 (best) BASIC2.6□□□□□ -1.99
LRRC40Q9H9A6 PSG8-202ENST00000401467 1686 ntTSL 5 BASIC2.6□□□□□ -1.99
LRRC40Q9H9A6 MYSM1-208ENST00000622766 6020 ntTSL 1 (best) BASIC2.59□□□□□ -1.99
LRRC40Q9H9A6 RNU6-223P-201ENST00000362830 107 ntBASIC2.59□□□□□ -1.99
LRRC40Q9H9A6 RNU6-7-201ENST00000364784 107 ntBASIC2.59□□□□□ -1.99
LRRC40Q9H9A6 Y_RNA.311-201ENST00000365068 96 ntBASIC2.59□□□□□ -1.99
LRRC40Q9H9A6 RNU6-8-201ENST00000365467 107 ntBASIC2.59□□□□□ -1.99
LRRC40Q9H9A6 DEFA7P-201ENST00000382676 285 ntBASIC2.59□□□□□ -1.99
LRRC40Q9H9A6 AP003170.3-201ENST00000399123 158 ntTSL 5 BASIC2.59□□□□□ -1.99
LRRC40Q9H9A6 SNORA11.1-201ENST00000408133 129 ntBASIC2.59□□□□□ -1.99
LRRC40Q9H9A6 USP9YP13-201ENST00000417797 480 ntBASIC2.59□□□□□ -1.99
LRRC40Q9H9A6 AL080284.1-201ENST00000434493 442 ntTSL 2 BASIC2.59□□□□□ -1.99
LRRC40Q9H9A6 LINC00529-201ENST00000443854 241 ntTSL 2 BASIC2.59□□□□□ -1.99
LRRC40Q9H9A6 AP000936.2-201ENST00000447151 681 ntBASIC2.59□□□□□ -1.99
LRRC40Q9H9A6 AC006042.4-201ENST00000451066 692 ntTSL 5 BASIC2.59□□□□□ -1.99
LRRC40Q9H9A6 AC027673.1-201ENST00000456245 405 ntBASIC2.59□□□□□ -1.99
LRRC40Q9H9A6 AP000852.1-201ENST00000472460 573 ntBASIC2.59□□□□□ -1.99
LRRC40Q9H9A6 AC104982.1-201ENST00000478775 574 ntBASIC2.59□□□□□ -1.99
LRRC40Q9H9A6 RPS15AP36-201ENST00000492022 382 ntBASIC2.59□□□□□ -1.99
LRRC40Q9H9A6 AC004052.1-202ENST00000505680 516 ntTSL 3 BASIC2.59□□□□□ -1.99
LRRC40Q9H9A6 AC105389.2-201ENST00000506475 435 ntTSL 3 BASIC2.59□□□□□ -1.99
LRRC40Q9H9A6 LINC02201-201ENST00000508992 468 ntTSL 2 BASIC2.59□□□□□ -1.99
LRRC40Q9H9A6 AC025475.1-201ENST00000512939 487 ntTSL 3 BASIC2.59□□□□□ -1.99
LRRC40Q9H9A6 AC093766.1-202ENST00000513400 718 ntTSL 3 BASIC2.59□□□□□ -1.99
LRRC40Q9H9A6 AC025524.1-201ENST00000518489 606 ntTSL 4 BASIC2.59□□□□□ -1.99
LRRC40Q9H9A6 LINC02143-201ENST00000519929 520 ntTSL 3 BASIC2.59□□□□□ -1.99
LRRC40Q9H9A6 AC090136.1-201ENST00000520009 240 ntBASIC2.59□□□□□ -1.99
LRRC40Q9H9A6 AC022679.1-202ENST00000520251 376 ntTSL 3 BASIC2.59□□□□□ -1.99
LRRC40Q9H9A6 AC100768.1-201ENST00000525512 506 ntTSL 3 BASIC2.59□□□□□ -1.99
LRRC40Q9H9A6 TAS2R43-201ENST00000531678 1027 ntAPPRIS P1 BASIC2.59□□□□□ -1.99
LRRC40Q9H9A6 LINC01735-201ENST00000568112 279 ntTSL 3 BASIC2.59□□□□□ -1.99
LRRC40Q9H9A6 AC009163.5-201ENST00000575421 637 ntBASIC2.59□□□□□ -1.99
LRRC40Q9H9A6 AC098617.1-216ENST00000602099 708 ntTSL 5 BASIC2.59□□□□□ -1.99
LRRC40Q9H9A6 DUXAP3-201ENST00000603616 594 ntBASIC2.59□□□□□ -1.99
LRRC40Q9H9A6 AL357094.1-201ENST00000603845 844 ntBASIC2.59□□□□□ -1.99
LRRC40Q9H9A6 AL160237.3-201ENST00000604114 1013 ntBASIC2.59□□□□□ -1.99
LRRC40Q9H9A6 OR10AB1P-201ENST00000609613 938 ntBASIC2.59□□□□□ -1.99
LRRC40Q9H9A6 AC013562.2-201ENST00000611632 603 ntBASIC2.59□□□□□ -1.99
LRRC40Q9H9A6 AL121895.2-201ENST00000619558 447 ntBASIC2.59□□□□□ -1.99
LRRC40Q9H9A6 AC010297.1-201ENST00000623948 149 ntBASIC2.59□□□□□ -1.99
LRRC40Q9H9A6 ZNF117-203ENST00000610793 1374 ntTSL 2 BASIC2.59□□□□□ -2
LRRC40Q9H9A6 OR5B3-201ENST00000309403 945 ntAPPRIS P1 BASIC2.58□□□□□ -2
LRRC40Q9H9A6 COTL1P1-201ENST00000422309 375 ntBASIC2.58□□□□□ -2
LRRC40Q9H9A6 RPS12P2-201ENST00000439728 269 ntBASIC2.58□□□□□ -2
LRRC40Q9H9A6 AL451164.2-201ENST00000445932 597 ntTSL 2 BASIC2.58□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 101.2 ms