Protein–RNA interactions for Protein: Q9H0F5

RNF38, E3 ubiquitin-protein ligase RNF38, humanhuman

Predictions only

Length 515 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF38Q9H0F5 BNIP3P16-201ENST00000589779 534 ntBASIC4.58□□□□□ -1.68
RNF38Q9H0F5 AC010649.1-203ENST00000592230 454 ntTSL 2 BASIC4.58□□□□□ -1.68
RNF38Q9H0F5 IPO5P1-202ENST00000600039 287 ntBASIC4.58□□□□□ -1.68
RNF38Q9H0F5 AC012669.1-201ENST00000603209 283 ntBASIC4.58□□□□□ -1.68
RNF38Q9H0F5 AL359962.2-201ENST00000610044 303 ntTSL 5 BASIC4.58□□□□□ -1.68
RNF38Q9H0F5 AL355365.1-201ENST00000616480 294 ntBASIC4.58□□□□□ -1.68
RNF38Q9H0F5 U4.1-201ENST00000620349 87 ntBASIC4.58□□□□□ -1.68
RNF38Q9H0F5 LGALS13-204ENST00000621475 494 ntAPPRIS ALT2 TSL 5 BASIC4.58□□□□□ -1.68
RNF38Q9H0F5 MIR3653-201ENST00000625572 110 ntBASIC4.58□□□□□ -1.68
RNF38Q9H0F5 AC068724.3-201ENST00000625906 87 ntBASIC4.58□□□□□ -1.68
RNF38Q9H0F5 AC008013.2-202ENST00000637965 364 ntBASIC4.58□□□□□ -1.68
RNF38Q9H0F5 SLC38A9-201ENST00000318672 2369 ntAPPRIS P1 TSL 2 BASIC4.58□□□□□ -1.68
RNF38Q9H0F5 ZNF562-201ENST00000293648 12380 ntTSL 2 BASIC4.58□□□□□ -1.68
RNF38Q9H0F5 GPBP1-205ENST00000511209 2243 ntAPPRIS ALT2 TSL 2 BASIC4.58□□□□□ -1.68
RNF38Q9H0F5 CCNYL2-202ENST00000637719 3311 ntTSL 2 BASIC4.58□□□□□ -1.68
RNF38Q9H0F5 CRISP1-202ENST00000335847 1911 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
RNF38Q9H0F5 SLC35A1-201ENST00000369552 1851 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
RNF38Q9H0F5 CNGA1-209ENST00000544810 2722 ntAPPRIS ALT2 TSL 5 BASIC4.58□□□□□ -1.68
RNF38Q9H0F5 FOXP2-207ENST00000393494 2664 ntAPPRIS P2 TSL 5 BASIC4.58□□□□□ -1.68
RNF38Q9H0F5 IQGAP2-204ENST00000502745 3404 ntTSL 2 BASIC4.58□□□□□ -1.68
RNF38Q9H0F5 AC092435.4-201ENST00000623012 4159 ntBASIC4.57□□□□□ -1.68
RNF38Q9H0F5 CACNB4-233ENST00000636773 4143 ntTSL 5 BASIC4.57□□□□□ -1.68
RNF38Q9H0F5 USP29-202ENST00000598197 3284 ntAPPRIS P1 BASIC4.57□□□□□ -1.68
RNF38Q9H0F5 LINC01021-204ENST00000512067 1610 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
RNF38Q9H0F5 LINC01416-201ENST00000563553 2310 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
RNF38Q9H0F5 PATJ-202ENST00000316485 3657 ntTSL 5 BASIC4.57□□□□□ -1.68
RNF38Q9H0F5 RLIM-201ENST00000332687 8317 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
RNF38Q9H0F5 TES-202ENST00000393481 2763 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
RNF38Q9H0F5 AGBL2-201ENST00000357610 3295 ntAPPRIS ALT2 TSL 5 BASIC4.57□□□□□ -1.68
RNF38Q9H0F5 ABCA12-201ENST00000272895 9100 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
RNF38Q9H0F5 CDC27P3-201ENST00000635418 1910 ntBASIC4.57□□□□□ -1.68
RNF38Q9H0F5 RNU1-63P-201ENST00000383902 164 ntBASIC4.57□□□□□ -1.68
RNF38Q9H0F5 RNA5SP219-201ENST00000390940 113 ntBASIC4.57□□□□□ -1.68
RNF38Q9H0F5 AL139397.2-201ENST00000404529 772 ntBASIC4.57□□□□□ -1.68
RNF38Q9H0F5 MIR1302-3-201ENST00000408128 138 ntBASIC4.57□□□□□ -1.68
RNF38Q9H0F5 RNA5SP107-201ENST00000411358 122 ntBASIC4.57□□□□□ -1.68
RNF38Q9H0F5 RPS20P14-201ENST00000412545 360 ntBASIC4.57□□□□□ -1.68
RNF38Q9H0F5 AC244098.2-201ENST00000422068 99 ntBASIC4.57□□□□□ -1.68
RNF38Q9H0F5 AL157378.1-201ENST00000424506 265 ntTSL 5 BASIC4.57□□□□□ -1.68
RNF38Q9H0F5 RPL7P46-201ENST00000425129 740 ntBASIC4.57□□□□□ -1.68
RNF38Q9H0F5 RPL23AP89-201ENST00000439324 255 ntBASIC4.57□□□□□ -1.68
RNF38Q9H0F5 AC007099.2-201ENST00000444852 336 ntTSL 5 BASIC4.57□□□□□ -1.68
RNF38Q9H0F5 AL354949.1-201ENST00000446438 170 ntTSL 2 BASIC4.57□□□□□ -1.68
RNF38Q9H0F5 TTTY23B-202ENST00000451467 512 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
RNF38Q9H0F5 TTTY23-201ENST00000452889 512 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
RNF38Q9H0F5 RPL21P93-201ENST00000480465 489 ntBASIC4.57□□□□□ -1.68
RNF38Q9H0F5 MGC32805-203ENST00000506053 652 ntTSL 3 BASIC4.57□□□□□ -1.68
RNF38Q9H0F5 AC010468.2-201ENST00000511981 438 ntTSL 2 BASIC4.57□□□□□ -1.68
RNF38Q9H0F5 TBCAP3-201ENST00000512475 312 ntBASIC4.57□□□□□ -1.68
RNF38Q9H0F5 AC008641.1-201ENST00000523781 248 ntTSL 3 BASIC4.57□□□□□ -1.68
RNF38Q9H0F5 LINC02425-201ENST00000536217 376 ntTSL 3 BASIC4.57□□□□□ -1.68
RNF38Q9H0F5 AC140847.1-201ENST00000538025 534 ntTSL 4 BASIC4.57□□□□□ -1.68
RNF38Q9H0F5 AC023043.2-201ENST00000589678 1026 ntBASIC4.57□□□□□ -1.68
RNF38Q9H0F5 AC003973.1-201ENST00000600071 546 ntTSL 4 BASIC4.57□□□□□ -1.68
RNF38Q9H0F5 AP001972.3-202ENST00000603012 375 ntTSL 3 BASIC4.57□□□□□ -1.68
RNF38Q9H0F5 AL357559.1-201ENST00000622228 274 ntBASIC4.57□□□□□ -1.68
RNF38Q9H0F5 RWDD2B-207ENST00000493196 3094 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
RNF38Q9H0F5 AC068254.2-201ENST00000623938 3577 ntBASIC4.57□□□□□ -1.68
RNF38Q9H0F5 CSRNP3-201ENST00000314499 11788 ntAPPRIS P1 TSL 5 BASIC4.57□□□□□ -1.68
RNF38Q9H0F5 EIF2A-201ENST00000273435 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC4.57□□□□□ -1.68
RNF38Q9H0F5 BDP1P-201ENST00000582658 1990 ntBASIC4.56□□□□□ -1.68
RNF38Q9H0F5 NFIB-211ENST00000606230 2311 ntTSL 5 BASIC4.56□□□□□ -1.68
RNF38Q9H0F5 KATNAL1-201ENST00000380615 7551 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
RNF38Q9H0F5 ARHGAP42-203ENST00000524892 5685 ntTSL 5 BASIC4.56□□□□□ -1.68
RNF38Q9H0F5 TLR3-201ENST00000296795 6015 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
RNF38Q9H0F5 OR2M2-201ENST00000359682 1044 ntAPPRIS P1 BASIC4.56□□□□□ -1.68
RNF38Q9H0F5 RNA5SP515-201ENST00000364570 118 ntBASIC4.56□□□□□ -1.68
RNF38Q9H0F5 RNU6-702P-201ENST00000364982 107 ntBASIC4.56□□□□□ -1.68
RNF38Q9H0F5 Y_RNA.364-201ENST00000365532 101 ntBASIC4.56□□□□□ -1.68
RNF38Q9H0F5 RNU6-1032P-201ENST00000384100 107 ntBASIC4.56□□□□□ -1.68
RNF38Q9H0F5 RNU6-1222P-201ENST00000384615 107 ntBASIC4.56□□□□□ -1.68
RNF38Q9H0F5 EIF4E2P1-201ENST00000393781 255 ntBASIC4.56□□□□□ -1.68
RNF38Q9H0F5 MIR921-201ENST00000401133 56 ntBASIC4.56□□□□□ -1.68
RNF38Q9H0F5 AC114482.1-201ENST00000418010 247 ntBASIC4.56□□□□□ -1.68
RNF38Q9H0F5 ACTR3BP6-201ENST00000422332 1241 ntBASIC4.56□□□□□ -1.68
RNF38Q9H0F5 ARPP21-211ENST00000427542 568 ntTSL 4 BASIC4.56□□□□□ -1.68
RNF38Q9H0F5 AC008278.2-201ENST00000438178 409 ntTSL 3 BASIC4.56□□□□□ -1.68
RNF38Q9H0F5 AC016696.1-201ENST00000446949 318 ntBASIC4.56□□□□□ -1.68
RNF38Q9H0F5 AC046136.1-201ENST00000459855 533 ntTSL 3 BASIC4.56□□□□□ -1.68
RNF38Q9H0F5 LINC01210-201ENST00000465283 625 ntTSL 2 BASIC4.56□□□□□ -1.68
RNF38Q9H0F5 FPGT-203ENST00000467578 601 ntTSL 2 BASIC4.56□□□□□ -1.68
RNF38Q9H0F5 UQCRHP4-201ENST00000471686 272 ntBASIC4.56□□□□□ -1.68
RNF38Q9H0F5 TRBV1-201ENST00000476502 284 ntBASIC4.56□□□□□ -1.68
RNF38Q9H0F5 TIPARP-AS1-202ENST00000478005 554 ntTSL 4 BASIC4.56□□□□□ -1.68
RNF38Q9H0F5 PARP4P3-201ENST00000510265 317 ntBASIC4.56□□□□□ -1.68
RNF38Q9H0F5 RNU6-1095P-201ENST00000516148 108 ntBASIC4.56□□□□□ -1.68
RNF38Q9H0F5 AP003730.1-201ENST00000524605 285 ntBASIC4.56□□□□□ -1.68
RNF38Q9H0F5 AC135001.1-201ENST00000544546 283 ntBASIC4.56□□□□□ -1.68
RNF38Q9H0F5 AC096558.2-201ENST00000546678 506 ntTSL 3 BASIC4.56□□□□□ -1.68
RNF38Q9H0F5 AL161670.1-201ENST00000554348 137 ntBASIC4.56□□□□□ -1.68
RNF38Q9H0F5 AC023510.1-201ENST00000555862 490 ntTSL 2 BASIC4.56□□□□□ -1.68
RNF38Q9H0F5 AC092718.6-202ENST00000563072 408 ntTSL 2 BASIC4.56□□□□□ -1.68
RNF38Q9H0F5 C2orf91-203ENST00000615044 393 ntAPPRIS ALT2 TSL 5 BASIC4.56□□□□□ -1.68
RNF38Q9H0F5 AL162373.1-201ENST00000620433 407 ntBASIC4.56□□□□□ -1.68
RNF38Q9H0F5 DLX6-AS1_1.1-201ENST00000621599 180 ntBASIC4.56□□□□□ -1.68
RNF38Q9H0F5 AC091905.2-201ENST00000623143 306 ntBASIC4.56□□□□□ -1.68
RNF38Q9H0F5 ALG13-230ENST00000623189 458 ntTSL 3 BASIC4.56□□□□□ -1.68
RNF38Q9H0F5 AC092608.2-201ENST00000624427 218 ntBASIC4.56□□□□□ -1.68
RNF38Q9H0F5 Z69720.2-201ENST00000624755 279 ntBASIC4.56□□□□□ -1.68
RNF38Q9H0F5 AL359313.1-202ENST00000635073 544 ntTSL 4 BASIC4.56□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 111 ms