Protein–RNA interactions for Protein: Q9C0A0

CNTNAP4, Contactin-associated protein-like 4, humanhuman

Predictions only

Length 1,308 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP4Q9C0A0 ADGRL2-204ENST00000370715 5585 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
CNTNAP4Q9C0A0 DAZ4-202ENST00000382314 3910 ntAPPRIS ALT2 TSL 5 BASIC5.09□□□□□ -1.59
CNTNAP4Q9C0A0 USP8-202ENST00000396444 19026 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
CNTNAP4Q9C0A0 APCS-201ENST00000255040 926 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
CNTNAP4Q9C0A0 U1.1-201ENST00000384101 164 ntBASIC5.09□□□□□ -1.59
CNTNAP4Q9C0A0 RNU6-1222P-201ENST00000384615 107 ntBASIC5.09□□□□□ -1.59
CNTNAP4Q9C0A0 RNU6-308P-201ENST00000390957 107 ntBASIC5.09□□□□□ -1.59
CNTNAP4Q9C0A0 RNU4-46P-201ENST00000410818 138 ntBASIC5.09□□□□□ -1.59
CNTNAP4Q9C0A0 AC133106.1-201ENST00000419029 397 ntTSL 3 BASIC5.09□□□□□ -1.59
CNTNAP4Q9C0A0 GNG5P5-201ENST00000420444 220 ntBASIC5.09□□□□□ -1.59
CNTNAP4Q9C0A0 PDSS1P1-201ENST00000422953 1114 ntBASIC5.09□□□□□ -1.59
CNTNAP4Q9C0A0 BX005214.1-201ENST00000427327 476 ntTSL 5 BASIC5.09□□□□□ -1.59
CNTNAP4Q9C0A0 AC092013.1-201ENST00000438795 332 ntBASIC5.09□□□□□ -1.59
CNTNAP4Q9C0A0 RPS3AP12-201ENST00000443616 753 ntBASIC5.09□□□□□ -1.59
CNTNAP4Q9C0A0 AL080313.2-201ENST00000456440 489 ntTSL 3 BASIC5.09□□□□□ -1.59
CNTNAP4Q9C0A0 AL390730.1-201ENST00000457106 692 ntTSL 2 BASIC5.09□□□□□ -1.59
CNTNAP4Q9C0A0 RPL30P15-201ENST00000457129 321 ntBASIC5.09□□□□□ -1.59
CNTNAP4Q9C0A0 SNORA59A-201ENST00000459326 152 ntBASIC5.09□□□□□ -1.59
CNTNAP4Q9C0A0 AC068633.1-201ENST00000482142 787 ntTSL 5 BASIC5.09□□□□□ -1.59
CNTNAP4Q9C0A0 AL359273.1-203ENST00000506295 602 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
CNTNAP4Q9C0A0 SNORA74D-201ENST00000516404 141 ntBASIC5.09□□□□□ -1.59
CNTNAP4Q9C0A0 SCARNA14-201ENST00000516903 136 ntBASIC5.09□□□□□ -1.59
CNTNAP4Q9C0A0 SULT1C2P2-201ENST00000562517 294 ntBASIC5.09□□□□□ -1.59
CNTNAP4Q9C0A0 MIR4680-201ENST00000580906 66 ntBASIC5.09□□□□□ -1.59
CNTNAP4Q9C0A0 MIR3936-201ENST00000584304 110 ntBASIC5.09□□□□□ -1.59
CNTNAP4Q9C0A0 AF038458.1-201ENST00000588406 262 ntBASIC5.09□□□□□ -1.59
CNTNAP4Q9C0A0 AC022601.1-201ENST00000596954 577 ntTSL 4 BASIC5.09□□□□□ -1.59
CNTNAP4Q9C0A0 RASSF8-215ENST00000611440 852 ntTSL 5 BASIC5.09□□□□□ -1.59
CNTNAP4Q9C0A0 AL590491.2-201ENST00000614608 499 ntTSL 5 BASIC5.09□□□□□ -1.59
CNTNAP4Q9C0A0 Z69720.2-201ENST00000624755 279 ntBASIC5.09□□□□□ -1.59
CNTNAP4Q9C0A0 PSMD1-213ENST00000619128 3161 ntAPPRIS ALT1 TSL 5 BASIC5.09□□□□□ -1.59
CNTNAP4Q9C0A0 PCAT14-202ENST00000627127 3935 ntBASIC5.09□□□□□ -1.59
CNTNAP4Q9C0A0 BDP1P-201ENST00000582658 1990 ntBASIC5.09□□□□□ -1.59
CNTNAP4Q9C0A0 TNRC6B-202ENST00000335727 17933 ntTSL 1 (best) BASIC5.09□□□□□ -1.6
CNTNAP4Q9C0A0 STON1-GTF2A1L-204ENST00000405008 3821 ntAPPRIS P1 TSL 5 BASIC5.09□□□□□ -1.6
CNTNAP4Q9C0A0 CCNT1-205ENST00000618666 6915 ntTSL 2 BASIC5.08□□□□□ -1.6
CNTNAP4Q9C0A0 LYST-201ENST00000389793 13480 ntAPPRIS P1 TSL 5 BASIC5.08□□□□□ -1.6
CNTNAP4Q9C0A0 MLIP-213ENST00000514921 5743 ntAPPRIS ALT2 TSL 1 (best) BASIC5.08□□□□□ -1.6
CNTNAP4Q9C0A0 PEAK1-204ENST00000560626 19217 ntAPPRIS P1 TSL 5 BASIC5.08□□□□□ -1.6
CNTNAP4Q9C0A0 PAPPA-AS1-201ENST00000445861 2450 ntBASIC5.08□□□□□ -1.6
CNTNAP4Q9C0A0 Y_RNA.148-201ENST00000363557 117 ntBASIC5.08□□□□□ -1.6
CNTNAP4Q9C0A0 RNA5SP399-201ENST00000364003 117 ntBASIC5.08□□□□□ -1.6
CNTNAP4Q9C0A0 RNU6-960P-201ENST00000364056 120 ntBASIC5.08□□□□□ -1.6
CNTNAP4Q9C0A0 MIR183-201ENST00000384958 110 ntBASIC5.08□□□□□ -1.6
CNTNAP4Q9C0A0 MIR34B-201ENST00000385076 84 ntBASIC5.08□□□□□ -1.6
CNTNAP4Q9C0A0 MRPL42P3-201ENST00000401492 326 ntBASIC5.08□□□□□ -1.6
CNTNAP4Q9C0A0 RPL31P12-201ENST00000422587 358 ntBASIC5.08□□□□□ -1.6
CNTNAP4Q9C0A0 AL109947.1-201ENST00000423747 382 ntTSL 2 BASIC5.08□□□□□ -1.6
CNTNAP4Q9C0A0 CALM2P2-201ENST00000428512 440 ntBASIC5.08□□□□□ -1.6
CNTNAP4Q9C0A0 AL139397.1-201ENST00000430456 644 ntTSL 2 BASIC5.08□□□□□ -1.6
CNTNAP4Q9C0A0 SNAP23P1-201ENST00000433229 246 ntBASIC5.08□□□□□ -1.6
CNTNAP4Q9C0A0 AL583835.2-201ENST00000435483 500 ntTSL 2 BASIC5.08□□□□□ -1.6
CNTNAP4Q9C0A0 AL590999.1-206ENST00000437947 436 ntTSL 3 BASIC5.08□□□□□ -1.6
CNTNAP4Q9C0A0 MTND1P17-201ENST00000448961 204 ntBASIC5.08□□□□□ -1.6
CNTNAP4Q9C0A0 AC010891.1-201ENST00000449963 448 ntTSL 2 BASIC5.08□□□□□ -1.6
CNTNAP4Q9C0A0 SNORD97-201ENST00000459187 142 ntBASIC5.08□□□□□ -1.6
CNTNAP4Q9C0A0 AC010273.2-201ENST00000479830 438 ntTSL 5 BASIC5.08□□□□□ -1.6
CNTNAP4Q9C0A0 AC015911.1-201ENST00000495111 156 ntBASIC5.08□□□□□ -1.6
CNTNAP4Q9C0A0 AC020893.1-201ENST00000502452 580 ntBASIC5.08□□□□□ -1.6
CNTNAP4Q9C0A0 UBE2CP3-201ENST00000502715 450 ntBASIC5.08□□□□□ -1.6
CNTNAP4Q9C0A0 AC109635.4-202ENST00000531666 412 ntBASIC5.08□□□□□ -1.6
CNTNAP4Q9C0A0 AC025254.1-201ENST00000550035 247 ntTSL 5 BASIC5.08□□□□□ -1.6
CNTNAP4Q9C0A0 AL160191.1-202ENST00000554008 576 ntTSL 4 BASIC5.08□□□□□ -1.6
CNTNAP4Q9C0A0 AL161670.1-201ENST00000554348 137 ntBASIC5.08□□□□□ -1.6
CNTNAP4Q9C0A0 AC012229.1-201ENST00000558699 499 ntTSL 4 BASIC5.08□□□□□ -1.6
CNTNAP4Q9C0A0 RPL23AP87-202ENST00000573039 466 ntBASIC5.08□□□□□ -1.6
CNTNAP4Q9C0A0 MIR4472-2-201ENST00000582069 67 ntBASIC5.08□□□□□ -1.6
CNTNAP4Q9C0A0 MIR3672-201ENST00000584290 82 ntBASIC5.08□□□□□ -1.6
CNTNAP4Q9C0A0 EAF1-AS1-211ENST00000610011 316 ntTSL 5 BASIC5.08□□□□□ -1.6
CNTNAP4Q9C0A0 SGIP1-204ENST00000371039 4080 ntAPPRIS ALT2 TSL 1 (best) BASIC5.08□□□□□ -1.6
CNTNAP4Q9C0A0 Z95327.2-201ENST00000414579 1873 ntBASIC5.08□□□□□ -1.6
CNTNAP4Q9C0A0 PUS7L-207ENST00000551923 3313 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
CNTNAP4Q9C0A0 MARCH1-202ENST00000339875 2476 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
CNTNAP4Q9C0A0 PPIG-207ENST00000448752 2498 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
CNTNAP4Q9C0A0 AL589740.1-207ENST00000607823 1962 ntTSL 5 BASIC5.08□□□□□ -1.6
CNTNAP4Q9C0A0 AL672167.1-205ENST00000641112 3080 ntBASIC5.08□□□□□ -1.6
CNTNAP4Q9C0A0 ADGRG2-205ENST00000357991 4661 ntAPPRIS P3 TSL 1 (best) BASIC5.07□□□□□ -1.6
CNTNAP4Q9C0A0 RNU6-702P-201ENST00000364982 107 ntBASIC5.07□□□□□ -1.6
CNTNAP4Q9C0A0 SNORD115-7-201ENST00000365306 82 ntBASIC5.07□□□□□ -1.6
CNTNAP4Q9C0A0 SNORD116-11-201ENST00000383882 92 ntBASIC5.07□□□□□ -1.6
CNTNAP4Q9C0A0 AL136372.1-201ENST00000403060 228 ntBASIC5.07□□□□□ -1.6
CNTNAP4Q9C0A0 POLHP1-201ENST00000411806 470 ntBASIC5.07□□□□□ -1.6
CNTNAP4Q9C0A0 AP000907.1-201ENST00000428428 510 ntBASIC5.07□□□□□ -1.6
CNTNAP4Q9C0A0 AL451060.1-203ENST00000431307 362 ntTSL 3 BASIC5.07□□□□□ -1.6
CNTNAP4Q9C0A0 HMGN2P31-201ENST00000432430 273 ntBASIC5.07□□□□□ -1.6
CNTNAP4Q9C0A0 AL158209.1-201ENST00000433460 439 ntTSL 3 BASIC5.07□□□□□ -1.6
CNTNAP4Q9C0A0 RPL35AP22-201ENST00000436855 335 ntBASIC5.07□□□□□ -1.6
CNTNAP4Q9C0A0 IKZF2-209ENST00000442445 551 ntTSL 5 BASIC5.07□□□□□ -1.6
CNTNAP4Q9C0A0 AL353691.1-201ENST00000451332 387 ntBASIC5.07□□□□□ -1.6
CNTNAP4Q9C0A0 RPS24P6-201ENST00000452670 400 ntBASIC5.07□□□□□ -1.6
CNTNAP4Q9C0A0 AC099499.1-201ENST00000505040 558 ntTSL 3 BASIC5.07□□□□□ -1.6
CNTNAP4Q9C0A0 COX7A2P2-201ENST00000505291 250 ntBASIC5.07□□□□□ -1.6
CNTNAP4Q9C0A0 AC026801.2-201ENST00000515352 425 ntBASIC5.07□□□□□ -1.6
CNTNAP4Q9C0A0 RNU6-764P-201ENST00000516396 105 ntBASIC5.07□□□□□ -1.6
CNTNAP4Q9C0A0 AC087439.1-201ENST00000517920 398 ntTSL 3 BASIC5.07□□□□□ -1.6
CNTNAP4Q9C0A0 AC021698.1-201ENST00000524858 716 ntTSL 3 BASIC5.07□□□□□ -1.6
CNTNAP4Q9C0A0 AP001458.1-201ENST00000532626 92 ntTSL 3 BASIC5.07□□□□□ -1.6
CNTNAP4Q9C0A0 ZNF84-212ENST00000542874 540 ntTSL 5 BASIC5.07□□□□□ -1.6
CNTNAP4Q9C0A0 LINC01269-201ENST00000553682 602 ntTSL 4 BASIC5.07□□□□□ -1.6
CNTNAP4Q9C0A0 OR11H5P-201ENST00000554039 926 ntBASIC5.07□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 79.2 ms