Protein–RNA interactions for Protein: Q9BXS0

COL25A1, Collagen alpha-1(XXV) chain, humanhuman

Predicted RBP Predictions only

Length 654 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL25A1Q9BXS0 AC069218.2-201ENST00000411665 344 ntBASIC5.23□□□□□ -1.57
COL25A1Q9BXS0 AC079809.1-201ENST00000415468 276 ntBASIC5.23□□□□□ -1.57
COL25A1Q9BXS0 Z73495.1-201ENST00000444982 147 ntTSL 3 BASIC5.23□□□□□ -1.57
COL25A1Q9BXS0 AC010631.1-201ENST00000474150 156 ntBASIC5.23□□□□□ -1.57
COL25A1Q9BXS0 MTND3P25-201ENST00000509243 135 ntBASIC5.23□□□□□ -1.57
COL25A1Q9BXS0 AC034223.1-201ENST00000511054 599 ntTSL 3 BASIC5.23□□□□□ -1.57
COL25A1Q9BXS0 RN7SKP67-201ENST00000515905 235 ntBASIC5.23□□□□□ -1.57
COL25A1Q9BXS0 AL590705.4-201ENST00000532209 134 ntBASIC5.23□□□□□ -1.57
COL25A1Q9BXS0 AC084365.1-201ENST00000552470 310 ntTSL 3 BASIC5.23□□□□□ -1.57
COL25A1Q9BXS0 MIR3684-201ENST00000579779 74 ntBASIC5.23□□□□□ -1.57
COL25A1Q9BXS0 AC008035.1-201ENST00000607353 448 ntTSL 3 BASIC5.23□□□□□ -1.57
COL25A1Q9BXS0 AC011476.5-201ENST00000615594 130 ntBASIC5.23□□□□□ -1.57
COL25A1Q9BXS0 FOXP2-205ENST00000393489 2285 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
COL25A1Q9BXS0 CCDC158-201ENST00000388914 3663 ntAPPRIS P1 TSL 5 BASIC5.23□□□□□ -1.57
COL25A1Q9BXS0 RAB3B-201ENST00000371655 12844 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
COL25A1Q9BXS0 ARHGAP24-201ENST00000264343 4572 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
COL25A1Q9BXS0 LINC00939-201ENST00000502479 4972 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
COL25A1Q9BXS0 IKZF2-210ENST00000451136 9344 ntTSL 5 BASIC5.23□□□□□ -1.57
COL25A1Q9BXS0 ERCC6L-201ENST00000334463 4243 ntAPPRIS P2 TSL 1 (best) BASIC5.23□□□□□ -1.57
COL25A1Q9BXS0 TMPRSS15-201ENST00000284885 3947 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
COL25A1Q9BXS0 MRPL50-201ENST00000374865 3332 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
COL25A1Q9BXS0 APBB2-230ENST00000543538 6992 ntTSL 5 BASIC5.23□□□□□ -1.57
COL25A1Q9BXS0 TRIP12-204ENST00000389045 5355 ntAPPRIS ALT2 TSL 1 (best) BASIC5.23□□□□□ -1.57
COL25A1Q9BXS0 C1orf112-201ENST00000286031 4355 ntAPPRIS P3 TSL 1 (best) BASIC5.23□□□□□ -1.57
COL25A1Q9BXS0 FASTKD2-201ENST00000236980 3188 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
COL25A1Q9BXS0 MACC1-205ENST00000589011 2686 ntAPPRIS P1 TSL 5 BASIC5.22□□□□□ -1.57
COL25A1Q9BXS0 TFPI-203ENST00000392365 3649 ntAPPRIS P1 TSL 5 BASIC5.22□□□□□ -1.57
COL25A1Q9BXS0 OR2A7-202ENST00000641841 2062 ntAPPRIS P1 BASIC5.22□□□□□ -1.57
COL25A1Q9BXS0 ADGRL3-210ENST00000508946 4758 ntAPPRIS ALT2 TSL 5 BASIC5.22□□□□□ -1.57
COL25A1Q9BXS0 UGP2-229ENST00000613823 1858 ntAPPRIS ALT1 TSL 5 BASIC5.22□□□□□ -1.57
COL25A1Q9BXS0 POC1B-201ENST00000313546 3001 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
COL25A1Q9BXS0 SLFN12L-205ENST00000628453 1767 ntAPPRIS ALT2 TSL 5 BASIC5.22□□□□□ -1.57
COL25A1Q9BXS0 IPCEF1-202ENST00000367220 1658 ntAPPRIS ALT2 TSL 2 BASIC5.22□□□□□ -1.57
COL25A1Q9BXS0 LRRC53-201ENST00000294635 3859 ntAPPRIS P1 TSL 5 BASIC5.22□□□□□ -1.57
COL25A1Q9BXS0 NRXN1-242ENST00000635519 3553 ntTSL 5 BASIC5.22□□□□□ -1.57
COL25A1Q9BXS0 CTSS-201ENST00000368985 4107 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
COL25A1Q9BXS0 AC011912.1-201ENST00000623483 5819 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
COL25A1Q9BXS0 OR52E5-201ENST00000610445 2244 ntAPPRIS P1 BASIC5.22□□□□□ -1.57
COL25A1Q9BXS0 SNORA25.1-201ENST00000362326 128 ntBASIC5.22□□□□□ -1.57
COL25A1Q9BXS0 SNORA70H-201ENST00000383910 135 ntBASIC5.22□□□□□ -1.57
COL25A1Q9BXS0 RNU6-1279P-201ENST00000383917 103 ntBASIC5.22□□□□□ -1.57
COL25A1Q9BXS0 RNU6-1056P-201ENST00000383996 107 ntBASIC5.22□□□□□ -1.57
COL25A1Q9BXS0 SNORA70J-201ENST00000384182 135 ntBASIC5.22□□□□□ -1.57
COL25A1Q9BXS0 RNU6-1289P-201ENST00000384431 106 ntBASIC5.22□□□□□ -1.57
COL25A1Q9BXS0 HSPE1P8-201ENST00000406997 288 ntBASIC5.22□□□□□ -1.57
COL25A1Q9BXS0 AC093578.1-201ENST00000415219 368 ntBASIC5.22□□□□□ -1.57
COL25A1Q9BXS0 AF186996.5-201ENST00000418098 904 ntBASIC5.22□□□□□ -1.57
COL25A1Q9BXS0 OOSP1P1-201ENST00000423265 274 ntBASIC5.22□□□□□ -1.57
COL25A1Q9BXS0 MTND4LP9-201ENST00000427694 174 ntBASIC5.22□□□□□ -1.57
COL25A1Q9BXS0 RPS29P10-201ENST00000439197 166 ntBASIC5.22□□□□□ -1.57
COL25A1Q9BXS0 AC011897.1-201ENST00000450715 346 ntTSL 3 BASIC5.22□□□□□ -1.57
COL25A1Q9BXS0 RPL23AP24-201ENST00000458203 385 ntBASIC5.22□□□□□ -1.57
COL25A1Q9BXS0 U8.22-201ENST00000459141 133 ntBASIC5.22□□□□□ -1.57
COL25A1Q9BXS0 RPL23AP2-201ENST00000471227 466 ntBASIC5.22□□□□□ -1.57
COL25A1Q9BXS0 RNU6-1234P-201ENST00000516877 103 ntBASIC5.22□□□□□ -1.57
COL25A1Q9BXS0 RNU6-677P-201ENST00000516914 101 ntBASIC5.22□□□□□ -1.57
COL25A1Q9BXS0 SNORA70.24-201ENST00000517233 118 ntBASIC5.22□□□□□ -1.57
COL25A1Q9BXS0 CASP1P1-201ENST00000526345 212 ntBASIC5.22□□□□□ -1.57
COL25A1Q9BXS0 AP002768.1-201ENST00000526741 320 ntTSL 3 BASIC5.22□□□□□ -1.57
COL25A1Q9BXS0 SNHG1-211ENST00000539921 1071 ntTSL 2 BASIC5.22□□□□□ -1.57
COL25A1Q9BXS0 AC009127.3-201ENST00000570531 403 ntBASIC5.22□□□□□ -1.57
COL25A1Q9BXS0 LRRC37A5P-203ENST00000580181 585 ntBASIC5.22□□□□□ -1.57
COL25A1Q9BXS0 MIR5692A1-201ENST00000580523 69 ntBASIC5.22□□□□□ -1.57
COL25A1Q9BXS0 MSMB-201ENST00000581478 386 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
COL25A1Q9BXS0 MIR132-201ENST00000591554 101 ntBASIC5.22□□□□□ -1.57
COL25A1Q9BXS0 AL591034.3-201ENST00000605511 685 ntBASIC5.22□□□□□ -1.57
COL25A1Q9BXS0 AL023881.1-201ENST00000621088 301 ntBASIC5.22□□□□□ -1.57
COL25A1Q9BXS0 CSDE1-203ENST00000358528 4076 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
COL25A1Q9BXS0 CYSLTR1-201ENST00000373304 2576 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
COL25A1Q9BXS0 RFESD-202ENST00000380005 2587 ntTSL 2 BASIC5.22□□□□□ -1.57
COL25A1Q9BXS0 ANO3-204ENST00000531568 3117 ntAPPRIS ALT2 TSL 2 BASIC5.22□□□□□ -1.57
COL25A1Q9BXS0 DDX3Y-201ENST00000336079 4445 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
COL25A1Q9BXS0 NBPF19-205ENST00000612881 3715 ntTSL 5 BASIC5.22□□□□□ -1.57
COL25A1Q9BXS0 LRRC39-204ENST00000620882 1951 ntTSL 5 BASIC5.22□□□□□ -1.57
COL25A1Q9BXS0 RUBCNL-205ENST00000389908 3956 ntAPPRIS P3 TSL 2 BASIC5.22□□□□□ -1.57
COL25A1Q9BXS0 RAPGEF4-204ENST00000409036 3975 ntTSL 5 BASIC5.22□□□□□ -1.57
COL25A1Q9BXS0 PTK2-212ENST00000519419 4439 ntTSL 5 BASIC5.22□□□□□ -1.57
COL25A1Q9BXS0 ADAMDEC1-201ENST00000256412 2348 ntAPPRIS P3 TSL 1 (best) BASIC5.22□□□□□ -1.57
COL25A1Q9BXS0 PHACTR2-207ENST00000427704 9531 ntAPPRIS ALT2 TSL 1 (best) BASIC5.22□□□□□ -1.57
COL25A1Q9BXS0 ZNF724-201ENST00000418100 2764 ntAPPRIS P1 TSL 2 BASIC5.21□□□□□ -1.57
COL25A1Q9BXS0 TGIF1-208ENST00000472042 2214 ntTSL 2 BASIC5.21□□□□□ -1.57
COL25A1Q9BXS0 LINGO2-201ENST00000308675 3031 ntAPPRIS P1 TSL 5 BASIC5.21□□□□□ -1.57
COL25A1Q9BXS0 ZNF534-204ENST00000433050 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC5.21□□□□□ -1.57
COL25A1Q9BXS0 POLK-210ENST00000508526 2019 ntTSL 1 (best) BASIC5.21□□□□□ -1.57
COL25A1Q9BXS0 ARHGEF6-201ENST00000250617 6019 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
COL25A1Q9BXS0 SCN2A-207ENST00000631182 8430 ntAPPRIS ALT1 TSL 5 BASIC5.21□□□□□ -1.58
COL25A1Q9BXS0 DNAH7-202ENST00000409063 1845 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
COL25A1Q9BXS0 AC092650.1-201ENST00000447571 1808 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
COL25A1Q9BXS0 AC083843.3-201ENST00000623679 2186 ntBASIC5.21□□□□□ -1.58
COL25A1Q9BXS0 EXOC1-202ENST00000349598 3248 ntAPPRIS ALT1 TSL 2 BASIC5.21□□□□□ -1.58
COL25A1Q9BXS0 FBXO3-213ENST00000534136 3217 ntTSL 5 BASIC5.21□□□□□ -1.58
COL25A1Q9BXS0 HIF1AN-201ENST00000299163 13011 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
COL25A1Q9BXS0 MIR99AHG-219ENST00000619222 3476 ntTSL 2 BASIC5.21□□□□□ -1.58
COL25A1Q9BXS0 RPL9P7-201ENST00000330965 580 ntBASIC5.21□□□□□ -1.58
COL25A1Q9BXS0 RNU6-151P-201ENST00000364158 107 ntBASIC5.21□□□□□ -1.58
COL25A1Q9BXS0 RNU4-84P-201ENST00000364200 139 ntBASIC5.21□□□□□ -1.58
COL25A1Q9BXS0 MIR521-1-201ENST00000384902 87 ntBASIC5.21□□□□□ -1.58
COL25A1Q9BXS0 AL357075.1-201ENST00000404107 726 ntBASIC5.21□□□□□ -1.58
COL25A1Q9BXS0 TMSB10P2-201ENST00000416049 131 ntBASIC5.21□□□□□ -1.58
COL25A1Q9BXS0 STXBP5-AS1-204ENST00000431143 644 ntTSL 3 BASIC5.21□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 105.3 ms