Protein–RNA interactions for Protein: Q96RW7

HMCN1, Hemicentin-1, humanhuman

Predictions only

Length 5,635 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMCN1Q96RW7 RNU6-429P-201ENST00000384582 108 ntBASIC1.37□□□□□ -2.19
HMCN1Q96RW7 AL590609.2-201ENST00000421430 368 ntBASIC1.37□□□□□ -2.19
HMCN1Q96RW7 AL358453.1-201ENST00000422522 250 ntBASIC1.37□□□□□ -2.19
HMCN1Q96RW7 IGKV1OR9-1-201ENST00000424370 284 ntBASIC1.37□□□□□ -2.19
HMCN1Q96RW7 AL451060.1-203ENST00000431307 362 ntTSL 3 BASIC1.37□□□□□ -2.19
HMCN1Q96RW7 AC245517.2-201ENST00000442890 346 ntBASIC1.37□□□□□ -2.19
HMCN1Q96RW7 MYCBP2-AS1-202ENST00000448470 333 ntTSL 3 BASIC1.37□□□□□ -2.19
HMCN1Q96RW7 ATP5G1P3-201ENST00000463301 410 ntBASIC1.37□□□□□ -2.19
HMCN1Q96RW7 RPS20P21-201ENST00000466859 343 ntBASIC1.37□□□□□ -2.19
HMCN1Q96RW7 TRBV1-201ENST00000476502 284 ntBASIC1.37□□□□□ -2.19
HMCN1Q96RW7 TCP11X3P-202ENST00000514289 1254 ntBASIC1.37□□□□□ -2.19
HMCN1Q96RW7 RNU1-95P-201ENST00000516357 160 ntBASIC1.37□□□□□ -2.19
HMCN1Q96RW7 RNU1-128P-201ENST00000516704 160 ntBASIC1.37□□□□□ -2.19
HMCN1Q96RW7 AC109329.2-201ENST00000519658 482 ntBASIC1.37□□□□□ -2.19
HMCN1Q96RW7 AC022360.1-201ENST00000521058 340 ntBASIC1.37□□□□□ -2.19
HMCN1Q96RW7 TPT1-AS1-216ENST00000522845 403 ntTSL 3 BASIC1.37□□□□□ -2.19
HMCN1Q96RW7 RGS4-207ENST00000527809 817 ntTSL 4 BASIC1.37□□□□□ -2.19
HMCN1Q96RW7 AC087362.2-201ENST00000529325 256 ntTSL 3 BASIC1.37□□□□□ -2.19
HMCN1Q96RW7 AC118273.2-201ENST00000532092 465 ntBASIC1.37□□□□□ -2.19
HMCN1Q96RW7 AC023796.1-201ENST00000536131 670 ntTSL 3 BASIC1.37□□□□□ -2.19
HMCN1Q96RW7 AC015917.1-201ENST00000579654 510 ntBASIC1.37□□□□□ -2.19
HMCN1Q96RW7 NRBF2P1-201ENST00000587407 859 ntBASIC1.37□□□□□ -2.19
HMCN1Q96RW7 AP005137.2-201ENST00000609238 400 ntBASIC1.37□□□□□ -2.19
HMCN1Q96RW7 uc_338.13-201ENST00000618243 179 ntBASIC1.37□□□□□ -2.19
HMCN1Q96RW7 FMNL3-201ENST00000335154 12634 ntAPPRIS ALT2 TSL 1 (best) BASIC1.37□□□□□ -2.19
HMCN1Q96RW7 ABCB5-202ENST00000404938 5811 ntAPPRIS P1 TSL 1 (best) BASIC1.37□□□□□ -2.19
HMCN1Q96RW7 MIA3-203ENST00000344922 8142 ntAPPRIS P2 TSL 5 BASIC1.37□□□□□ -2.19
HMCN1Q96RW7 PTCD3-201ENST00000254630 6734 ntAPPRIS P1 TSL 1 (best) BASIC1.37□□□□□ -2.19
HMCN1Q96RW7 N4BP2L2-IT2-201ENST00000629393 4890 ntBASIC1.37□□□□□ -2.19
HMCN1Q96RW7 TAOK3-202ENST00000419821 4301 ntAPPRIS P1 TSL 1 (best) BASIC1.37□□□□□ -2.19
HMCN1Q96RW7 CR1-203ENST00000367051 7469 ntTSL 5 BASIC1.37□□□□□ -2.19
HMCN1Q96RW7 CR1-204ENST00000367052 7469 ntTSL 5 BASIC1.37□□□□□ -2.19
HMCN1Q96RW7 CR1-205ENST00000367053 7469 ntTSL 5 BASIC1.37□□□□□ -2.19
HMCN1Q96RW7 ZNF592-203ENST00000560079 8131 ntAPPRIS P1 TSL 1 (best) BASIC1.37□□□□□ -2.19
HMCN1Q96RW7 AC021146.4-201ENST00000309229 279 ntBASIC1.37□□□□□ -2.19
HMCN1Q96RW7 DEFB4B-201ENST00000318157 332 ntAPPRIS P1 TSL 1 (best) BASIC1.37□□□□□ -2.19
HMCN1Q96RW7 RNA5SP374-201ENST00000362939 125 ntBASIC1.37□□□□□ -2.19
HMCN1Q96RW7 MIR488-201ENST00000365739 83 ntBASIC1.37□□□□□ -2.19
HMCN1Q96RW7 SNORA22-201ENST00000383907 134 ntBASIC1.37□□□□□ -2.19
HMCN1Q96RW7 SOD2P1-201ENST00000396543 562 ntBASIC1.37□□□□□ -2.19
HMCN1Q96RW7 MIR1251-201ENST00000408552 70 ntBASIC1.37□□□□□ -2.19
HMCN1Q96RW7 AC017083.1-201ENST00000428093 483 ntBASIC1.37□□□□□ -2.19
HMCN1Q96RW7 EXTL2P1-201ENST00000446218 416 ntBASIC1.37□□□□□ -2.19
HMCN1Q96RW7 CALM1P2-201ENST00000452941 448 ntBASIC1.37□□□□□ -2.19
HMCN1Q96RW7 RPL9P32-201ENST00000464118 620 ntBASIC1.37□□□□□ -2.19
HMCN1Q96RW7 SNORD33.1-201ENST00000516213 88 ntBASIC1.37□□□□□ -2.19
HMCN1Q96RW7 Y_RNA.700-201ENST00000516806 100 ntBASIC1.37□□□□□ -2.19
HMCN1Q96RW7 HIGD1AP18-201ENST00000520730 278 ntBASIC1.37□□□□□ -2.19
HMCN1Q96RW7 DNAJC8P1-201ENST00000554535 372 ntBASIC1.37□□□□□ -2.19
HMCN1Q96RW7 HMGB1P14-201ENST00000557424 591 ntBASIC1.37□□□□□ -2.19
HMCN1Q96RW7 AC106796.1-201ENST00000577173 615 ntTSL 3 BASIC1.37□□□□□ -2.19
HMCN1Q96RW7 MIR5187-201ENST00000583479 76 ntBASIC1.37□□□□□ -2.19
HMCN1Q96RW7 FBXW2-205ENST00000608872 9138 ntAPPRIS P1 TSL 1 (best) BASIC1.37□□□□□ -2.19
HMCN1Q96RW7 STAG1-201ENST00000236698 5951 ntTSL 1 (best) BASIC1.37□□□□□ -2.19
HMCN1Q96RW7 ATP2B1-201ENST00000261173 6777 ntAPPRIS P1 TSL 1 (best) BASIC1.37□□□□□ -2.19
HMCN1Q96RW7 ARHGEF6-203ENST00000370622 4779 ntTSL 1 (best) BASIC1.37□□□□□ -2.19
HMCN1Q96RW7 PLCL2-202ENST00000432376 3940 ntAPPRIS P3 TSL 1 (best) BASIC1.37□□□□□ -2.19
HMCN1Q96RW7 RORA-203ENST00000335670 10844 ntAPPRIS P3 TSL 1 (best) BASIC1.37□□□□□ -2.19
HMCN1Q96RW7 LUZP1-203ENST00000418342 8421 ntAPPRIS P1 TSL 5 BASIC1.37□□□□□ -2.19
HMCN1Q96RW7 CSNK1G1-201ENST00000303052 8179 ntAPPRIS P2 TSL 1 (best) BASIC1.36□□□□□ -2.19
HMCN1Q96RW7 PLCH1-201ENST00000334686 6128 ntAPPRIS P3 TSL 1 (best) BASIC1.36□□□□□ -2.19
HMCN1Q96RW7 DEFB108B-201ENST00000328698 222 ntAPPRIS P1 TSL 1 (best) BASIC1.36□□□□□ -2.19
HMCN1Q96RW7 RNU6-1313P-201ENST00000362622 102 ntBASIC1.36□□□□□ -2.19
HMCN1Q96RW7 RHOT1P2-201ENST00000366423 333 ntBASIC1.36□□□□□ -2.19
HMCN1Q96RW7 Y_RNA.476-201ENST00000384347 108 ntBASIC1.36□□□□□ -2.19
HMCN1Q96RW7 MIR525-201ENST00000384978 85 ntBASIC1.36□□□□□ -2.19
HMCN1Q96RW7 RNU6-192P-201ENST00000391253 100 ntBASIC1.36□□□□□ -2.19
HMCN1Q96RW7 ACTR3BP6-201ENST00000422332 1241 ntBASIC1.36□□□□□ -2.19
HMCN1Q96RW7 AL356583.2-201ENST00000426536 280 ntBASIC1.36□□□□□ -2.19
HMCN1Q96RW7 UBXN7-204ENST00000428095 1173 ntTSL 1 (best) BASIC1.36□□□□□ -2.19
HMCN1Q96RW7 FTH1P10-202ENST00000430907 550 ntBASIC1.36□□□□□ -2.19
HMCN1Q96RW7 RPEP2-201ENST00000432149 701 ntBASIC1.36□□□□□ -2.19
HMCN1Q96RW7 MTND5P15-201ENST00000434246 349 ntBASIC1.36□□□□□ -2.19
HMCN1Q96RW7 AL135790.2-201ENST00000437701 267 ntBASIC1.36□□□□□ -2.19
HMCN1Q96RW7 RPL23AP52-201ENST00000439311 478 ntBASIC1.36□□□□□ -2.19
HMCN1Q96RW7 ARF4P4-201ENST00000439608 520 ntBASIC1.36□□□□□ -2.19
HMCN1Q96RW7 RBMX2P4-201ENST00000441256 376 ntBASIC1.36□□□□□ -2.19
HMCN1Q96RW7 AC008154.1-201ENST00000453087 327 ntTSL 3 BASIC1.36□□□□□ -2.19
HMCN1Q96RW7 HMGB1P15-201ENST00000453854 435 ntBASIC1.36□□□□□ -2.19
HMCN1Q96RW7 SNORD125-201ENST00000459538 96 ntBASIC1.36□□□□□ -2.19
HMCN1Q96RW7 PTP4A2-203ENST00000470404 575 ntTSL 3 BASIC1.36□□□□□ -2.19
HMCN1Q96RW7 FAM92A1P2-202ENST00000504766 877 ntBASIC1.36□□□□□ -2.19
HMCN1Q96RW7 RNU7-200P-201ENST00000516105 62 ntBASIC1.36□□□□□ -2.19
HMCN1Q96RW7 RNU4ATAC8P-201ENST00000516196 109 ntBASIC1.36□□□□□ -2.19
HMCN1Q96RW7 AC009623.2-201ENST00000522524 465 ntTSL 3 BASIC1.36□□□□□ -2.19
HMCN1Q96RW7 LINC02546-202ENST00000528119 801 ntTSL 5 BASIC1.36□□□□□ -2.19
HMCN1Q96RW7 AC092745.2-201ENST00000537764 620 ntTSL 3 BASIC1.36□□□□□ -2.19
HMCN1Q96RW7 NACA-211ENST00000548563 827 ntTSL 5 BASIC1.36□□□□□ -2.19
HMCN1Q96RW7 AP001004.1-201ENST00000582468 324 ntBASIC1.36□□□□□ -2.19
HMCN1Q96RW7 AC068790.5-201ENST00000602741 355 ntBASIC1.36□□□□□ -2.19
HMCN1Q96RW7 AC004987.4-201ENST00000603383 338 ntBASIC1.36□□□□□ -2.19
HMCN1Q96RW7 AL355365.1-201ENST00000616480 294 ntBASIC1.36□□□□□ -2.19
HMCN1Q96RW7 CNTN5-207ENST00000527185 4303 ntTSL 1 (best) BASIC1.36□□□□□ -2.19
HMCN1Q96RW7 ST8SIA5-203ENST00000538168 13761 ntTSL 2 BASIC1.36□□□□□ -2.19
HMCN1Q96RW7 ZNF766-201ENST00000439461 6298 ntAPPRIS P2 TSL 1 (best) BASIC1.36□□□□□ -2.19
HMCN1Q96RW7 NBPF20-203ENST00000594479 3670 ntTSL 5 BASIC1.36□□□□□ -2.19
HMCN1Q96RW7 NBPF26-201ENST00000609741 3671 ntTSL 5 BASIC1.36□□□□□ -2.19
HMCN1Q96RW7 MYSM1-203ENST00000472487 7785 ntAPPRIS P1 TSL 1 (best) BASIC1.36□□□□□ -2.19
HMCN1Q96RW7 ATRX-202ENST00000395603 10218 ntAPPRIS ALT2 TSL 1 (best) BASIC1.36□□□□□ -2.19
HMCN1Q96RW7 PLD1-203ENST00000356327 5855 ntAPPRIS P1 TSL 1 (best) BASIC1.36□□□□□ -2.19
Retrieved 100 of 98,524 protein–RNA pairs in 98.9 ms