Protein–RNA interactions for Protein: Q96NY8

NECTIN4, Nectin-4, humanhuman

Predictions only

Length 510 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NECTIN4Q96NY8 ZNF479-202ENST00000331162 2072 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.89
NECTIN4Q96NY8 CCDC178-213ENST00000583930 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC3.21□□□□□ -1.9
NECTIN4Q96NY8 MAPK10-362ENST00000641864 4484 ntBASIC3.21□□□□□ -1.9
NECTIN4Q96NY8 RNU4-91P-201ENST00000364778 135 ntBASIC3.21□□□□□ -1.9
NECTIN4Q96NY8 RNU6-882P-201ENST00000391025 103 ntBASIC3.21□□□□□ -1.9
NECTIN4Q96NY8 AC016907.1-201ENST00000419483 435 ntBASIC3.21□□□□□ -1.9
NECTIN4Q96NY8 TMEM167AP1-201ENST00000423409 219 ntBASIC3.21□□□□□ -1.9
NECTIN4Q96NY8 AL596220.1-202ENST00000429768 314 ntTSL 3 BASIC3.21□□□□□ -1.9
NECTIN4Q96NY8 AC010153.1-201ENST00000432862 727 ntBASIC3.21□□□□□ -1.9
NECTIN4Q96NY8 AC108734.1-201ENST00000439549 399 ntBASIC3.21□□□□□ -1.9
NECTIN4Q96NY8 AL135938.1-201ENST00000443141 297 ntBASIC3.21□□□□□ -1.9
NECTIN4Q96NY8 FAM103A2P-201ENST00000444122 354 ntBASIC3.21□□□□□ -1.9
NECTIN4Q96NY8 RPL7P36-201ENST00000444633 681 ntBASIC3.21□□□□□ -1.9
NECTIN4Q96NY8 AL360221.1-201ENST00000445989 335 ntBASIC3.21□□□□□ -1.9
NECTIN4Q96NY8 RNA5SP310-201ENST00000459084 116 ntBASIC3.21□□□□□ -1.9
NECTIN4Q96NY8 PPP2R2B-IT1-201ENST00000505921 447 ntTSL 3 BASIC3.21□□□□□ -1.9
NECTIN4Q96NY8 AC105389.2-201ENST00000506475 435 ntTSL 3 BASIC3.21□□□□□ -1.9
NECTIN4Q96NY8 AC113383.1-204ENST00000507060 552 ntTSL 3 BASIC3.21□□□□□ -1.9
NECTIN4Q96NY8 MTCO3P28-201ENST00000513351 515 ntBASIC3.21□□□□□ -1.9
NECTIN4Q96NY8 SNORA31.1-201ENST00000515993 133 ntBASIC3.21□□□□□ -1.9
NECTIN4Q96NY8 SNORA31.5-201ENST00000516190 133 ntBASIC3.21□□□□□ -1.9
NECTIN4Q96NY8 AC108471.2-204ENST00000526807 784 ntTSL 5 BASIC3.21□□□□□ -1.9
NECTIN4Q96NY8 PIGY-201ENST00000527353 217 ntAPPRIS P1 BASIC3.21□□□□□ -1.9
NECTIN4Q96NY8 AC084879.2-201ENST00000551656 369 ntTSL 3 BASIC3.21□□□□□ -1.9
NECTIN4Q96NY8 AL035425.2-201ENST00000563887 563 ntAPPRIS P1 TSL 4 BASIC3.21□□□□□ -1.9
NECTIN4Q96NY8 AC055876.1-202ENST00000567053 138 ntBASIC3.21□□□□□ -1.9
NECTIN4Q96NY8 AC040904.1-201ENST00000590850 223 ntBASIC3.21□□□□□ -1.9
NECTIN4Q96NY8 AC073544.2-201ENST00000601155 540 ntBASIC3.21□□□□□ -1.9
NECTIN4Q96NY8 AC106900.2-201ENST00000604994 317 ntBASIC3.21□□□□□ -1.9
NECTIN4Q96NY8 MUC7-203ENST00000456088 2479 ntAPPRIS P2 TSL 4 BASIC3.21□□□□□ -1.9
NECTIN4Q96NY8 P2RY12-201ENST00000302632 1766 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
NECTIN4Q96NY8 RXFP1-201ENST00000307765 3842 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
NECTIN4Q96NY8 ATL2-202ENST00000402054 1883 ntTSL 5 BASIC3.2□□□□□ -1.9
NECTIN4Q96NY8 LINC00301-201ENST00000320202 852 ntTSL 2 BASIC3.2□□□□□ -1.9
NECTIN4Q96NY8 Y_RNA.201-201ENST00000364052 96 ntBASIC3.2□□□□□ -1.9
NECTIN4Q96NY8 SPRR2D-203ENST00000368757 800 ntAPPRIS P1 TSL 3 BASIC3.2□□□□□ -1.9
NECTIN4Q96NY8 RNU6-1207P-201ENST00000384343 107 ntBASIC3.2□□□□□ -1.9
NECTIN4Q96NY8 TRAV7-201ENST00000390429 337 ntAPPRIS P1 BASIC3.2□□□□□ -1.9
NECTIN4Q96NY8 RPS4XP3-201ENST00000398541 413 ntBASIC3.2□□□□□ -1.9
NECTIN4Q96NY8 AL354719.1-201ENST00000406535 843 ntBASIC3.2□□□□□ -1.9
NECTIN4Q96NY8 RNU2-47P-201ENST00000410649 186 ntBASIC3.2□□□□□ -1.9
NECTIN4Q96NY8 AFDN-AS1-202ENST00000417244 182 ntTSL 2 BASIC3.2□□□□□ -1.9
NECTIN4Q96NY8 MORF4L1P6-201ENST00000418771 268 ntBASIC3.2□□□□□ -1.9
NECTIN4Q96NY8 NUP35P1-201ENST00000422734 947 ntBASIC3.2□□□□□ -1.9
NECTIN4Q96NY8 BX119904.4-201ENST00000424402 301 ntBASIC3.2□□□□□ -1.9
NECTIN4Q96NY8 SLC44A3-AS1-205ENST00000424505 612 ntBASIC3.2□□□□□ -1.9
NECTIN4Q96NY8 MTATP6P4-201ENST00000427725 675 ntBASIC3.2□□□□□ -1.9
NECTIN4Q96NY8 NUTM2A-AS1-209ENST00000447424 571 ntTSL 3 BASIC3.2□□□□□ -1.9
NECTIN4Q96NY8 AL592447.1-201ENST00000447592 540 ntBASIC3.2□□□□□ -1.9
NECTIN4Q96NY8 AC074327.1-201ENST00000448017 540 ntTSL 2 BASIC3.2□□□□□ -1.9
NECTIN4Q96NY8 AC104308.1-201ENST00000454621 333 ntBASIC3.2□□□□□ -1.9
NECTIN4Q96NY8 LINC01546-201ENST00000457435 674 ntTSL 2 BASIC3.2□□□□□ -1.9
NECTIN4Q96NY8 snoU13.8-201ENST00000458890 104 ntBASIC3.2□□□□□ -1.9
NECTIN4Q96NY8 RNA5SP269-201ENST00000459032 137 ntBASIC3.2□□□□□ -1.9
NECTIN4Q96NY8 RPS29P26-201ENST00000477483 171 ntBASIC3.2□□□□□ -1.9
NECTIN4Q96NY8 RAP1BP2-201ENST00000478270 544 ntBASIC3.2□□□□□ -1.9
NECTIN4Q96NY8 AP000797.1-201ENST00000478870 387 ntBASIC3.2□□□□□ -1.9
NECTIN4Q96NY8 RPL30P14-201ENST00000482744 348 ntBASIC3.2□□□□□ -1.9
NECTIN4Q96NY8 AP001025.2-201ENST00000490908 477 ntBASIC3.2□□□□□ -1.9
NECTIN4Q96NY8 AC034222.1-201ENST00000494052 532 ntBASIC3.2□□□□□ -1.9
NECTIN4Q96NY8 SLC7A11-AS1-201ENST00000510066 817 ntTSL 2 BASIC3.2□□□□□ -1.9
NECTIN4Q96NY8 AC109454.3-201ENST00000512748 669 ntTSL 3 BASIC3.2□□□□□ -1.9
NECTIN4Q96NY8 RNU6-1003P-201ENST00000517099 105 ntBASIC3.2□□□□□ -1.9
NECTIN4Q96NY8 AC109466.1-211ENST00000519327 496 ntTSL 3 BASIC3.2□□□□□ -1.9
NECTIN4Q96NY8 NARSP2-202ENST00000522022 349 ntTSL 3 BASIC3.2□□□□□ -1.9
NECTIN4Q96NY8 AC239802.1-201ENST00000531288 406 ntTSL 5 BASIC3.2□□□□□ -1.9
NECTIN4Q96NY8 TGIF1P1-201ENST00000558095 802 ntBASIC3.2□□□□□ -1.9
NECTIN4Q96NY8 LINC02562-201ENST00000561705 785 ntTSL 2 BASIC3.2□□□□□ -1.9
NECTIN4Q96NY8 MIR4319-201ENST00000577285 85 ntBASIC3.2□□□□□ -1.9
NECTIN4Q96NY8 MIR5697-201ENST00000578045 78 ntBASIC3.2□□□□□ -1.9
NECTIN4Q96NY8 AC090371.2-202ENST00000582239 644 ntTSL 5 BASIC3.2□□□□□ -1.9
NECTIN4Q96NY8 AC083760.1-201ENST00000589621 670 ntBASIC3.2□□□□□ -1.9
NECTIN4Q96NY8 LINC01928-201ENST00000591029 504 ntTSL 3 BASIC3.2□□□□□ -1.9
NECTIN4Q96NY8 AC008739.1-201ENST00000598137 575 ntTSL 2 BASIC3.2□□□□□ -1.9
NECTIN4Q96NY8 Metazoa_SRP.117-201ENST00000615106 292 ntBASIC3.2□□□□□ -1.9
NECTIN4Q96NY8 AC002550.2-201ENST00000621246 394 ntBASIC3.2□□□□□ -1.9
NECTIN4Q96NY8 PALMD-205ENST00000615664 1844 ntTSL 5 BASIC3.2□□□□□ -1.9
NECTIN4Q96NY8 PRKACB-217ENST00000610457 4206 ntTSL 2 BASIC3.2□□□□□ -1.9
NECTIN4Q96NY8 PRKACB-218ENST00000610703 4240 ntTSL 2 BASIC3.2□□□□□ -1.9
NECTIN4Q96NY8 OR6C1-202ENST00000642104 2055 ntAPPRIS P1 BASIC3.2□□□□□ -1.9
NECTIN4Q96NY8 AL359693.1-201ENST00000614959 2407 ntBASIC3.19□□□□□ -1.9
NECTIN4Q96NY8 RAPGEF6-202ENST00000308008 4176 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
NECTIN4Q96NY8 OXR1-206ENST00000449762 2621 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
NECTIN4Q96NY8 Y_RNA.318-201ENST00000365131 97 ntBASIC3.19□□□□□ -1.9
NECTIN4Q96NY8 U8.14-201ENST00000390843 143 ntBASIC3.19□□□□□ -1.9
NECTIN4Q96NY8 AL356421.1-201ENST00000403255 413 ntBASIC3.19□□□□□ -1.9
NECTIN4Q96NY8 MTCYBP36-201ENST00000404146 440 ntBASIC3.19□□□□□ -1.9
NECTIN4Q96NY8 MIR1290-201ENST00000408735 78 ntBASIC3.19□□□□□ -1.9
NECTIN4Q96NY8 RNU6-55P-201ENST00000411092 107 ntBASIC3.19□□□□□ -1.9
NECTIN4Q96NY8 RNU6-954P-201ENST00000411355 107 ntBASIC3.19□□□□□ -1.9
NECTIN4Q96NY8 PSMA4-202ENST00000413382 1019 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
NECTIN4Q96NY8 BTF3L4P1-201ENST00000413813 468 ntBASIC3.19□□□□□ -1.9
NECTIN4Q96NY8 B3GALNT1P1-201ENST00000420569 975 ntBASIC3.19□□□□□ -1.9
NECTIN4Q96NY8 AL645937.1-202ENST00000421799 937 ntBASIC3.19□□□□□ -1.9
NECTIN4Q96NY8 RPL21P40-201ENST00000428586 483 ntBASIC3.19□□□□□ -1.9
NECTIN4Q96NY8 LINC00189-202ENST00000431661 308 ntTSL 5 BASIC3.19□□□□□ -1.9
NECTIN4Q96NY8 MTND1P28-201ENST00000435623 950 ntBASIC3.19□□□□□ -1.9
NECTIN4Q96NY8 AL590664.1-201ENST00000448065 339 ntBASIC3.19□□□□□ -1.9
NECTIN4Q96NY8 AL078587.1-201ENST00000448580 542 ntTSL 5 BASIC3.19□□□□□ -1.9
NECTIN4Q96NY8 AC006539.3-201ENST00000454258 129 ntBASIC3.19□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 83 ms