Protein–RNA interactions for Protein: Q96M89

CCDC138, Coiled-coil domain-containing protein 138, humanhuman

Predictions only

Length 665 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC138Q96M89 U3.44-201ENST00000458938 192 ntBASIC3.84□□□□□ -1.79
CCDC138Q96M89 RPL21P11-201ENST00000461458 483 ntBASIC3.84□□□□□ -1.79
CCDC138Q96M89 AL135752.1-201ENST00000479477 471 ntBASIC3.84□□□□□ -1.79
CCDC138Q96M89 RPS3AP14-201ENST00000483907 780 ntBASIC3.84□□□□□ -1.79
CCDC138Q96M89 AC006445.2-201ENST00000510061 472 ntBASIC3.84□□□□□ -1.79
CCDC138Q96M89 AC108078.2-201ENST00000510750 236 ntBASIC3.84□□□□□ -1.79
CCDC138Q96M89 AC026726.1-201ENST00000512859 601 ntBASIC3.84□□□□□ -1.79
CCDC138Q96M89 SNORD27.1-201ENST00000516319 72 ntBASIC3.84□□□□□ -1.79
CCDC138Q96M89 RNU6-506P-201ENST00000516553 94 ntBASIC3.84□□□□□ -1.79
CCDC138Q96M89 RNA5SP290-201ENST00000517133 127 ntBASIC3.84□□□□□ -1.79
CCDC138Q96M89 AC024619.4-201ENST00000580924 316 ntBASIC3.84□□□□□ -1.79
CCDC138Q96M89 AC087749.1-202ENST00000585020 566 ntTSL 2 BASIC3.84□□□□□ -1.79
CCDC138Q96M89 AC098826.3-201ENST00000603823 466 ntBASIC3.84□□□□□ -1.79
CCDC138Q96M89 AL391646.1-201ENST00000603860 190 ntBASIC3.84□□□□□ -1.79
CCDC138Q96M89 AC005609.4-201ENST00000625071 447 ntBASIC3.84□□□□□ -1.79
CCDC138Q96M89 UBE3AP2-201ENST00000429033 2259 ntBASIC3.84□□□□□ -1.79
CCDC138Q96M89 AC022336.2-201ENST00000568966 2538 ntBASIC3.84□□□□□ -1.8
CCDC138Q96M89 AC006504.1-201ENST00000562493 3666 ntBASIC3.84□□□□□ -1.8
CCDC138Q96M89 SLC30A6-204ENST00000406369 4589 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
CCDC138Q96M89 AL589740.1-207ENST00000607823 1962 ntTSL 5 BASIC3.83□□□□□ -1.8
CCDC138Q96M89 OR10J1-203ENST00000642080 3503 ntAPPRIS P1 BASIC3.83□□□□□ -1.8
CCDC138Q96M89 AC087521.2-201ENST00000499066 2190 ntTSL 2 BASIC3.83□□□□□ -1.8
CCDC138Q96M89 ZGRF1-212ENST00000612287 2176 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
CCDC138Q96M89 MCF2-210ENST00000536274 3461 ntAPPRIS ALT2 TSL 2 BASIC3.83□□□□□ -1.8
CCDC138Q96M89 ACEA_U3.1-201ENST00000363057 217 ntBASIC3.83□□□□□ -1.8
CCDC138Q96M89 Y_RNA.245-201ENST00000364493 95 ntBASIC3.83□□□□□ -1.8
CCDC138Q96M89 SNORA24.1-201ENST00000384401 135 ntBASIC3.83□□□□□ -1.8
CCDC138Q96M89 MIR454-201ENST00000390180 115 ntBASIC3.83□□□□□ -1.8
CCDC138Q96M89 TRAJ17-201ENST00000390520 63 ntAPPRIS P1 BASIC3.83□□□□□ -1.8
CCDC138Q96M89 RPL21P17-201ENST00000397467 475 ntBASIC3.83□□□□□ -1.8
CCDC138Q96M89 RNU6ATAC16P-201ENST00000408591 138 ntBASIC3.83□□□□□ -1.8
CCDC138Q96M89 AL365356.1-201ENST00000411512 736 ntTSL 3 BASIC3.83□□□□□ -1.8
CCDC138Q96M89 RPS12P24-201ENST00000412619 387 ntBASIC3.83□□□□□ -1.8
CCDC138Q96M89 AC017074.1-201ENST00000424612 561 ntTSL 3 BASIC3.83□□□□□ -1.8
CCDC138Q96M89 MTND3P21-201ENST00000433774 331 ntBASIC3.83□□□□□ -1.8
CCDC138Q96M89 AC002465.1-201ENST00000436097 349 ntTSL 2 BASIC3.83□□□□□ -1.8
CCDC138Q96M89 SETP5-201ENST00000437270 562 ntBASIC3.83□□□□□ -1.8
CCDC138Q96M89 FABP5P13-201ENST00000452144 328 ntBASIC3.83□□□□□ -1.8
CCDC138Q96M89 RPL7P5-201ENST00000471472 736 ntBASIC3.83□□□□□ -1.8
CCDC138Q96M89 RPL9P33-201ENST00000484311 566 ntBASIC3.83□□□□□ -1.8
CCDC138Q96M89 RPL39P36-201ENST00000490784 156 ntBASIC3.83□□□□□ -1.8
CCDC138Q96M89 AC024022.1-202ENST00000508911 394 ntTSL 2 BASIC3.83□□□□□ -1.8
CCDC138Q96M89 APOOP4-201ENST00000513530 597 ntBASIC3.83□□□□□ -1.8
CCDC138Q96M89 RNA5SP471-201ENST00000516971 106 ntBASIC3.83□□□□□ -1.8
CCDC138Q96M89 YPEL5P3-201ENST00000547227 352 ntBASIC3.83□□□□□ -1.8
CCDC138Q96M89 AC073525.1-202ENST00000550049 732 ntTSL 3 BASIC3.83□□□□□ -1.8
CCDC138Q96M89 G2E3-AS1-204ENST00000552511 402 ntTSL 2 BASIC3.83□□□□□ -1.8
CCDC138Q96M89 HMGB1P14-201ENST00000557424 591 ntBASIC3.83□□□□□ -1.8
CCDC138Q96M89 MIR4474-201ENST00000579189 78 ntBASIC3.83□□□□□ -1.8
CCDC138Q96M89 MIR3609-201ENST00000582661 80 ntBASIC3.83□□□□□ -1.8
CCDC138Q96M89 AC146944.4-201ENST00000602697 718 ntBASIC3.83□□□□□ -1.8
CCDC138Q96M89 AC012507.3-201ENST00000603556 477 ntBASIC3.83□□□□□ -1.8
CCDC138Q96M89 AC080078.2-201ENST00000603766 501 ntBASIC3.83□□□□□ -1.8
CCDC138Q96M89 AC025449.1-201ENST00000603896 529 ntBASIC3.83□□□□□ -1.8
CCDC138Q96M89 AL161798.1-201ENST00000604630 131 ntBASIC3.83□□□□□ -1.8
CCDC138Q96M89 AC013562.2-201ENST00000611632 603 ntBASIC3.83□□□□□ -1.8
CCDC138Q96M89 AC006111.3-201ENST00000622137 383 ntBASIC3.83□□□□□ -1.8
CCDC138Q96M89 AC093648.1-201ENST00000623546 606 ntBASIC3.83□□□□□ -1.8
CCDC138Q96M89 SRP54-214ENST00000630962 162 ntTSL 5 BASIC3.83□□□□□ -1.8
CCDC138Q96M89 RPS4Y1-201ENST00000250784 1305 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
CCDC138Q96M89 KCNIP4-207ENST00000509207 1301 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
CCDC138Q96M89 AGTR1-206ENST00000474935 1795 ntAPPRIS P1 TSL 3 BASIC3.83□□□□□ -1.8
CCDC138Q96M89 CNOT4-202ENST00000356162 2594 ntTSL 5 BASIC3.83□□□□□ -1.8
CCDC138Q96M89 ADGRL4-201ENST00000370742 3527 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
CCDC138Q96M89 SUCNR1-201ENST00000362032 4181 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
CCDC138Q96M89 FOXP2-224ENST00000635534 4290 ntTSL 5 BASIC3.82□□□□□ -1.8
CCDC138Q96M89 KIFAP3-202ENST00000367765 4111 ntTSL 2 BASIC3.82□□□□□ -1.8
CCDC138Q96M89 PKIB-202ENST00000354275 1043 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
CCDC138Q96M89 RNU6-190P-201ENST00000384154 102 ntBASIC3.82□□□□□ -1.8
CCDC138Q96M89 HMGN2P8-201ENST00000391458 268 ntBASIC3.82□□□□□ -1.8
CCDC138Q96M89 MTCO3P40-201ENST00000392516 676 ntBASIC3.82□□□□□ -1.8
CCDC138Q96M89 LINC00301-202ENST00000412599 772 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
CCDC138Q96M89 MTCO1P21-201ENST00000416634 589 ntBASIC3.82□□□□□ -1.8
CCDC138Q96M89 CR769775.2-201ENST00000417850 891 ntTSL 3 BASIC3.82□□□□□ -1.8
CCDC138Q96M89 AC012498.1-201ENST00000424037 437 ntBASIC3.82□□□□□ -1.8
CCDC138Q96M89 TIMM9P3-201ENST00000428659 274 ntBASIC3.82□□□□□ -1.8
CCDC138Q96M89 AL353612.1-201ENST00000428769 465 ntTSL 3 BASIC3.82□□□□□ -1.8
CCDC138Q96M89 HMGN2P20-201ENST00000437531 273 ntBASIC3.82□□□□□ -1.8
CCDC138Q96M89 RANP8-201ENST00000444720 713 ntBASIC3.82□□□□□ -1.8
CCDC138Q96M89 HSFY6P-201ENST00000445573 403 ntBASIC3.82□□□□□ -1.8
CCDC138Q96M89 AC011897.1-201ENST00000450715 346 ntTSL 3 BASIC3.82□□□□□ -1.8
CCDC138Q96M89 AC012181.1-201ENST00000479895 423 ntBASIC3.82□□□□□ -1.8
CCDC138Q96M89 MIR2116-201ENST00000517221 80 ntBASIC3.82□□□□□ -1.8
CCDC138Q96M89 AC087369.1-201ENST00000520775 996 ntBASIC3.82□□□□□ -1.8
CCDC138Q96M89 AP003034.1-201ENST00000534621 422 ntBASIC3.82□□□□□ -1.8
CCDC138Q96M89 AP000777.1-201ENST00000541495 355 ntTSL 3 BASIC3.82□□□□□ -1.8
CCDC138Q96M89 LINC02277-201ENST00000553386 453 ntTSL 2 BASIC3.82□□□□□ -1.8
CCDC138Q96M89 HMGB1P6-201ENST00000569046 646 ntBASIC3.82□□□□□ -1.8
CCDC138Q96M89 AC004147.1-201ENST00000580658 299 ntTSL 3 BASIC3.82□□□□□ -1.8
CCDC138Q96M89 AC011461.1-201ENST00000592671 357 ntTSL 3 BASIC3.82□□□□□ -1.8
CCDC138Q96M89 HSPE1P7-201ENST00000604681 321 ntBASIC3.82□□□□□ -1.8
CCDC138Q96M89 AC017083.3-201ENST00000609955 700 ntBASIC3.82□□□□□ -1.8
CCDC138Q96M89 AL138880.2-201ENST00000616214 239 ntBASIC3.82□□□□□ -1.8
CCDC138Q96M89 AC025034.2-201ENST00000623264 286 ntBASIC3.82□□□□□ -1.8
CCDC138Q96M89 KIAA0586-215ENST00000619722 5597 ntAPPRIS ALT2 TSL 2 BASIC3.82□□□□□ -1.8
CCDC138Q96M89 TOPORSLP1-203ENST00000493279 2871 ntTSL 4 BASIC3.82□□□□□ -1.8
CCDC138Q96M89 CSNK1G3-203ENST00000361991 2424 ntAPPRIS P3 TSL 1 (best) BASIC3.82□□□□□ -1.8
CCDC138Q96M89 ADGRL2-211ENST00000370730 6173 ntTSL 5 BASIC3.82□□□□□ -1.8
CCDC138Q96M89 SLC6A15-203ENST00000450363 4229 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
CCDC138Q96M89 MBNL1-220ENST00000493459 4205 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 83.1 ms