Protein–RNA interactions for Protein: Q96LD4

TRIM47, Tripartite motif-containing protein 47, humanhuman

Predictions only

Length 638 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47Q96LD4 RASGRP1-209ENST00000559830 1910 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
TRIM47Q96LD4 SPAM1-203ENST00000402183 1860 ntAPPRIS P4 TSL 5 BASIC5.83□□□□□ -1.48
TRIM47Q96LD4 ZBBX-202ENST00000392764 2849 ntAPPRIS ALT2 TSL 1 (best) BASIC5.83□□□□□ -1.48
TRIM47Q96LD4 MCF2L2-202ENST00000414362 3031 ntTSL 2 BASIC5.82□□□□□ -1.48
TRIM47Q96LD4 PSD3-201ENST00000286485 6665 ntAPPRIS P3 TSL 1 (best) BASIC5.82□□□□□ -1.48
TRIM47Q96LD4 BAZ2B-203ENST00000392782 8058 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
TRIM47Q96LD4 STEAP2-205ENST00000394629 2261 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
TRIM47Q96LD4 AP005435.3-201ENST00000531260 3198 ntBASIC5.82□□□□□ -1.48
TRIM47Q96LD4 HEATR5A-203ENST00000543095 7840 ntAPPRIS P1 TSL 5 BASIC5.82□□□□□ -1.48
TRIM47Q96LD4 ELAVL2-202ENST00000380110 3691 ntTSL 5 BASIC5.82□□□□□ -1.48
TRIM47Q96LD4 OR2AT4-203ENST00000641541 8795 ntAPPRIS P1 BASIC5.82□□□□□ -1.48
TRIM47Q96LD4 XKR4-201ENST00000327381 19880 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
TRIM47Q96LD4 RNA5SP223-201ENST00000365174 120 ntBASIC5.82□□□□□ -1.48
TRIM47Q96LD4 RNU6-790P-201ENST00000384479 105 ntBASIC5.82□□□□□ -1.48
TRIM47Q96LD4 RPS4XP7-201ENST00000406274 780 ntBASIC5.82□□□□□ -1.48
TRIM47Q96LD4 RNU5E-9P-201ENST00000411164 104 ntBASIC5.82□□□□□ -1.48
TRIM47Q96LD4 AC009276.1-201ENST00000422042 253 ntTSL 5 BASIC5.82□□□□□ -1.48
TRIM47Q96LD4 MTND3P9-201ENST00000429526 346 ntBASIC5.82□□□□□ -1.48
TRIM47Q96LD4 DAP3P1-201ENST00000441522 278 ntBASIC5.82□□□□□ -1.48
TRIM47Q96LD4 RNU7-59P-201ENST00000459101 61 ntBASIC5.82□□□□□ -1.48
TRIM47Q96LD4 AP000926.1-201ENST00000479573 241 ntBASIC5.82□□□□□ -1.48
TRIM47Q96LD4 RPL7AP10-201ENST00000481016 791 ntBASIC5.82□□□□□ -1.48
TRIM47Q96LD4 RNU6-1092P-201ENST00000516955 87 ntBASIC5.82□□□□□ -1.48
TRIM47Q96LD4 AC104576.1-201ENST00000524225 88 ntBASIC5.82□□□□□ -1.48
TRIM47Q96LD4 AC084880.2-201ENST00000536009 501 ntTSL 3 BASIC5.82□□□□□ -1.48
TRIM47Q96LD4 LSM6P2-201ENST00000552208 177 ntBASIC5.82□□□□□ -1.48
TRIM47Q96LD4 AC107958.3-201ENST00000553410 431 ntTSL 3 BASIC5.82□□□□□ -1.48
TRIM47Q96LD4 AC090615.1-201ENST00000577519 154 ntBASIC5.82□□□□□ -1.48
TRIM47Q96LD4 AL670379.6-201ENST00000603753 252 ntBASIC5.82□□□□□ -1.48
TRIM47Q96LD4 AL670379.1-201ENST00000604752 252 ntBASIC5.82□□□□□ -1.48
TRIM47Q96LD4 AL670379.2-201ENST00000604983 252 ntBASIC5.82□□□□□ -1.48
TRIM47Q96LD4 AL670379.5-201ENST00000605253 252 ntBASIC5.82□□□□□ -1.48
TRIM47Q96LD4 AL670379.8-201ENST00000605353 252 ntBASIC5.82□□□□□ -1.48
TRIM47Q96LD4 HSPE1P14-201ENST00000605812 302 ntBASIC5.82□□□□□ -1.48
TRIM47Q96LD4 AL670379.7-201ENST00000605823 252 ntBASIC5.82□□□□□ -1.48
TRIM47Q96LD4 AP005432.2-201ENST00000608162 586 ntBASIC5.82□□□□□ -1.48
TRIM47Q96LD4 FTO-223ENST00000640179 210 ntTSL 5 BASIC5.82□□□□□ -1.48
TRIM47Q96LD4 OSBPL9P4-201ENST00000371707 1800 ntBASIC5.82□□□□□ -1.48
TRIM47Q96LD4 AC104623.2-202ENST00000623477 4002 ntBASIC5.82□□□□□ -1.48
TRIM47Q96LD4 LRRC19-201ENST00000380055 3609 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
TRIM47Q96LD4 GTF2IRD2P1-202ENST00000618962 3055 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
TRIM47Q96LD4 STARD9-201ENST00000290607 15567 ntAPPRIS P1 TSL 5 BASIC5.82□□□□□ -1.48
TRIM47Q96LD4 SLC10A7-203ENST00000432059 3747 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
TRIM47Q96LD4 RNU6-960P-201ENST00000364056 120 ntBASIC5.81□□□□□ -1.48
TRIM47Q96LD4 Y_RNA.215-201ENST00000364204 112 ntBASIC5.81□□□□□ -1.48
TRIM47Q96LD4 U3.22-201ENST00000391120 215 ntBASIC5.81□□□□□ -1.48
TRIM47Q96LD4 AL023807.1-201ENST00000407932 359 ntBASIC5.81□□□□□ -1.48
TRIM47Q96LD4 MIR1193-201ENST00000408109 78 ntBASIC5.81□□□□□ -1.48
TRIM47Q96LD4 RN7SKP222-201ENST00000410651 315 ntBASIC5.81□□□□□ -1.48
TRIM47Q96LD4 EI24P1-201ENST00000416584 867 ntBASIC5.81□□□□□ -1.48
TRIM47Q96LD4 AF186996.5-201ENST00000418098 904 ntBASIC5.81□□□□□ -1.48
TRIM47Q96LD4 AL355989.1-202ENST00000419406 408 ntTSL 3 BASIC5.81□□□□□ -1.48
TRIM47Q96LD4 AC005871.1-201ENST00000450247 475 ntTSL 3 BASIC5.81□□□□□ -1.48
TRIM47Q96LD4 IGHV5-78-201ENST00000450948 295 ntBASIC5.81□□□□□ -1.48
TRIM47Q96LD4 RN7SL189P-201ENST00000468631 289 ntBASIC5.81□□□□□ -1.48
TRIM47Q96LD4 RN7SL41P-201ENST00000476144 297 ntBASIC5.81□□□□□ -1.48
TRIM47Q96LD4 RPL30P10-201ENST00000488148 337 ntBASIC5.81□□□□□ -1.48
TRIM47Q96LD4 AC074250.1-201ENST00000511117 192 ntBASIC5.81□□□□□ -1.48
TRIM47Q96LD4 AC093853.1-201ENST00000515689 483 ntBASIC5.81□□□□□ -1.48
TRIM47Q96LD4 RN7SKP122-201ENST00000515923 296 ntBASIC5.81□□□□□ -1.48
TRIM47Q96LD4 RN7SKP21-201ENST00000516503 220 ntBASIC5.81□□□□□ -1.48
TRIM47Q96LD4 PIGY-201ENST00000527353 217 ntAPPRIS P1 BASIC5.81□□□□□ -1.48
TRIM47Q96LD4 SYF2P1-201ENST00000550658 413 ntBASIC5.81□□□□□ -1.48
TRIM47Q96LD4 AC104002.2-201ENST00000553919 318 ntTSL 5 BASIC5.81□□□□□ -1.48
TRIM47Q96LD4 LINC02137-203ENST00000567448 930 ntTSL 5 BASIC5.81□□□□□ -1.48
TRIM47Q96LD4 RPL23AP84-201ENST00000571193 464 ntBASIC5.81□□□□□ -1.48
TRIM47Q96LD4 MIR4277-201ENST00000578298 84 ntBASIC5.81□□□□□ -1.48
TRIM47Q96LD4 MIR4715-201ENST00000584117 79 ntBASIC5.81□□□□□ -1.48
TRIM47Q96LD4 LAMTOR5-AS1-217ENST00000608152 407 ntTSL 5 BASIC5.81□□□□□ -1.48
TRIM47Q96LD4 AC005696.2-201ENST00000610120 626 ntTSL 3 BASIC5.81□□□□□ -1.48
TRIM47Q96LD4 MIR6830-201ENST00000636015 70 ntBASIC5.81□□□□□ -1.48
TRIM47Q96LD4 AC073136.1-201ENST00000449426 2884 ntBASIC5.81□□□□□ -1.48
TRIM47Q96LD4 CNTN1-202ENST00000348761 3328 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
TRIM47Q96LD4 HYKK-206ENST00000569878 4097 ntAPPRIS P1 TSL 5 BASIC5.81□□□□□ -1.48
TRIM47Q96LD4 SPAM1-201ENST00000223028 2007 ntAPPRIS ALT2 TSL 5 BASIC5.81□□□□□ -1.48
TRIM47Q96LD4 AC097063.1-201ENST00000426714 1797 ntBASIC5.8□□□□□ -1.48
TRIM47Q96LD4 ATPAF1-212ENST00000542495 1779 ntTSL 2 BASIC5.8□□□□□ -1.48
TRIM47Q96LD4 DNAJB4-201ENST00000370763 2988 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
TRIM47Q96LD4 DOCK9-207ENST00000442173 7643 ntAPPRIS ALT2 TSL 5 BASIC5.8□□□□□ -1.48
TRIM47Q96LD4 CASC19-201ENST00000500112 5735 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
TRIM47Q96LD4 RNU6-290P-201ENST00000365212 101 ntBASIC5.8□□□□□ -1.48
TRIM47Q96LD4 RNU6-1329P-201ENST00000365664 107 ntBASIC5.8□□□□□ -1.48
TRIM47Q96LD4 RNU6-449P-201ENST00000383914 107 ntBASIC5.8□□□□□ -1.48
TRIM47Q96LD4 RNU6-102P-201ENST00000384485 104 ntBASIC5.8□□□□□ -1.48
TRIM47Q96LD4 DEFB115-201ENST00000400552 267 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
TRIM47Q96LD4 AL033519.2-201ENST00000403958 392 ntBASIC5.8□□□□□ -1.48
TRIM47Q96LD4 U3.42-201ENST00000408746 214 ntBASIC5.8□□□□□ -1.48
TRIM47Q96LD4 AC090952.1-201ENST00000424242 446 ntTSL 3 BASIC5.8□□□□□ -1.48
TRIM47Q96LD4 BX323845.1-201ENST00000432417 179 ntBASIC5.8□□□□□ -1.48
TRIM47Q96LD4 LINC02264-201ENST00000442020 576 ntTSL 3 BASIC5.8□□□□□ -1.48
TRIM47Q96LD4 AC112715.1-201ENST00000445534 350 ntTSL 3 BASIC5.8□□□□□ -1.48
TRIM47Q96LD4 AL121580.1-201ENST00000449941 219 ntTSL 3 BASIC5.8□□□□□ -1.48
TRIM47Q96LD4 TRAPPC2P7-201ENST00000509650 231 ntBASIC5.8□□□□□ -1.48
TRIM47Q96LD4 ACA59.1-201ENST00000515966 143 ntBASIC5.8□□□□□ -1.48
TRIM47Q96LD4 RNA5SP272-201ENST00000516095 111 ntBASIC5.8□□□□□ -1.48
TRIM47Q96LD4 TBCA-207ENST00000520039 157 ntTSL 3 BASIC5.8□□□□□ -1.48
TRIM47Q96LD4 AC100870.1-201ENST00000522035 505 ntBASIC5.8□□□□□ -1.48
TRIM47Q96LD4 AP001880.2-201ENST00000538233 448 ntBASIC5.8□□□□□ -1.48
TRIM47Q96LD4 LINC02327-203ENST00000550122 738 ntTSL 2 BASIC5.8□□□□□ -1.48
TRIM47Q96LD4 AC087463.1-201ENST00000568541 556 ntTSL 2 BASIC5.8□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 112.1 ms