Protein–RNA interactions for Protein: Q96FC9

DDX11, ATP-dependent DNA helicase DDX11, humanhuman

Predictions only

Length 970 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX11Q96FC9 ZFYVE16-201ENST00000338008 6773 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
DDX11Q96FC9 SLC38A9-201ENST00000318672 2369 ntAPPRIS P1 TSL 2 BASIC4.77□□□□□ -1.65
DDX11Q96FC9 AC011460.1-201ENST00000636268 1834 ntBASIC4.77□□□□□ -1.65
DDX11Q96FC9 C5orf46-201ENST00000318315 506 ntAPPRIS P2 TSL 1 (best) BASIC4.77□□□□□ -1.65
DDX11Q96FC9 SNORD35B-201ENST00000363660 87 ntBASIC4.77□□□□□ -1.65
DDX11Q96FC9 RNU6-522P-201ENST00000364497 107 ntBASIC4.77□□□□□ -1.65
DDX11Q96FC9 AL390198.1-201ENST00000376445 320 ntTSL 2 BASIC4.77□□□□□ -1.65
DDX11Q96FC9 RNU6-356P-201ENST00000384140 107 ntBASIC4.77□□□□□ -1.65
DDX11Q96FC9 MIR19A-201ENST00000384878 82 ntBASIC4.77□□□□□ -1.65
DDX11Q96FC9 TRAV26-1-201ENST00000390455 537 ntAPPRIS P1 BASIC4.77□□□□□ -1.65
DDX11Q96FC9 U3.20-201ENST00000390909 217 ntBASIC4.77□□□□□ -1.65
DDX11Q96FC9 SSXP10-201ENST00000402595 565 ntBASIC4.77□□□□□ -1.65
DDX11Q96FC9 AL359634.1-202ENST00000404721 284 ntBASIC4.77□□□□□ -1.65
DDX11Q96FC9 RNU4-14P-201ENST00000410858 122 ntBASIC4.77□□□□□ -1.65
DDX11Q96FC9 AL162411.1-201ENST00000413145 526 ntTSL 2 BASIC4.77□□□□□ -1.65
DDX11Q96FC9 BEND7P1-201ENST00000422058 457 ntBASIC4.77□□□□□ -1.65
DDX11Q96FC9 AL358472.1-201ENST00000431295 329 ntBASIC4.77□□□□□ -1.65
DDX11Q96FC9 MTATP6P16-201ENST00000434543 526 ntBASIC4.77□□□□□ -1.65
DDX11Q96FC9 AL033504.1-204ENST00000434985 413 ntTSL 2 BASIC4.77□□□□□ -1.65
DDX11Q96FC9 AC108734.1-201ENST00000439549 399 ntBASIC4.77□□□□□ -1.65
DDX11Q96FC9 RPL7P52-201ENST00000449200 742 ntBASIC4.77□□□□□ -1.65
DDX11Q96FC9 NDUFS5P3-201ENST00000450668 321 ntBASIC4.77□□□□□ -1.65
DDX11Q96FC9 AL590639.1-201ENST00000456484 337 ntBASIC4.77□□□□□ -1.65
DDX11Q96FC9 AL392086.1-201ENST00000457632 299 ntTSL 3 BASIC4.77□□□□□ -1.65
DDX11Q96FC9 PTP4A2-203ENST00000470404 575 ntTSL 3 BASIC4.77□□□□□ -1.65
DDX11Q96FC9 AC021382.1-201ENST00000483523 359 ntBASIC4.77□□□□□ -1.65
DDX11Q96FC9 MTCO1P29-201ENST00000496868 288 ntBASIC4.77□□□□□ -1.65
DDX11Q96FC9 AC092436.1-201ENST00000506450 503 ntBASIC4.77□□□□□ -1.65
DDX11Q96FC9 RN7SKP219-201ENST00000516825 296 ntBASIC4.77□□□□□ -1.65
DDX11Q96FC9 Y_RNA.718-201ENST00000517110 102 ntBASIC4.77□□□□□ -1.65
DDX11Q96FC9 SNORA25.17-201ENST00000517184 124 ntBASIC4.77□□□□□ -1.65
DDX11Q96FC9 AC009597.1-201ENST00000521215 584 ntTSL 4 BASIC4.77□□□□□ -1.65
DDX11Q96FC9 AC091944.1-201ENST00000521984 449 ntTSL 3 BASIC4.77□□□□□ -1.65
DDX11Q96FC9 AC100871.2-201ENST00000522005 327 ntTSL 3 BASIC4.77□□□□□ -1.65
DDX11Q96FC9 AC010175.1-201ENST00000538219 224 ntTSL 5 BASIC4.77□□□□□ -1.65
DDX11Q96FC9 AC128657.1-201ENST00000549459 145 ntBASIC4.77□□□□□ -1.65
DDX11Q96FC9 AC009803.1-201ENST00000551531 416 ntTSL 3 BASIC4.77□□□□□ -1.65
DDX11Q96FC9 AL160191.1-202ENST00000554008 576 ntTSL 4 BASIC4.77□□□□□ -1.65
DDX11Q96FC9 AL355836.1-201ENST00000555951 870 ntBASIC4.77□□□□□ -1.65
DDX11Q96FC9 LINC01028-202ENST00000588782 458 ntTSL 3 BASIC4.77□□□□□ -1.65
DDX11Q96FC9 LINC01515-204ENST00000595269 402 ntTSL 5 BASIC4.77□□□□□ -1.65
DDX11Q96FC9 LINC00907-211ENST00000601948 795 ntTSL 5 BASIC4.77□□□□□ -1.65
DDX11Q96FC9 AL080274.1-201ENST00000605565 220 ntBASIC4.77□□□□□ -1.65
DDX11Q96FC9 AL627309.6-201ENST00000606857 840 ntBASIC4.77□□□□□ -1.65
DDX11Q96FC9 UBE2E2-206ENST00000613545 282 ntTSL 5 BASIC4.77□□□□□ -1.65
DDX11Q96FC9 DAZ4-206ENST00000449750 3271 ntTSL 5 BASIC4.77□□□□□ -1.65
DDX11Q96FC9 CCSER1-201ENST00000432775 3927 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
DDX11Q96FC9 AC009902.3-201ENST00000606235 2172 ntBASIC4.77□□□□□ -1.65
DDX11Q96FC9 CDH9-201ENST00000231021 3079 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
DDX11Q96FC9 NT5C3A-202ENST00000381626 1909 ntAPPRIS ALT1 TSL 5 BASIC4.76□□□□□ -1.65
DDX11Q96FC9 NRIP1-201ENST00000318948 7556 ntAPPRIS P1 TSL 2 BASIC4.76□□□□□ -1.65
DDX11Q96FC9 LINC02471-203ENST00000641941 4752 ntBASIC4.76□□□□□ -1.65
DDX11Q96FC9 ZBTB8OS-201ENST00000341885 312 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
DDX11Q96FC9 RNU6-97P-201ENST00000363387 104 ntBASIC4.76□□□□□ -1.65
DDX11Q96FC9 U3.12-201ENST00000364498 214 ntBASIC4.76□□□□□ -1.65
DDX11Q96FC9 Y_RNA.301-201ENST00000364990 103 ntBASIC4.76□□□□□ -1.65
DDX11Q96FC9 Y_RNA.395-201ENST00000383945 109 ntBASIC4.76□□□□□ -1.65
DDX11Q96FC9 RNU6-38P-201ENST00000384085 107 ntBASIC4.76□□□□□ -1.65
DDX11Q96FC9 RNU6-1297P-201ENST00000384415 104 ntBASIC4.76□□□□□ -1.65
DDX11Q96FC9 MIR1250-201ENST00000408098 113 ntBASIC4.76□□□□□ -1.65
DDX11Q96FC9 RNU4-26P-201ENST00000410270 107 ntBASIC4.76□□□□□ -1.65
DDX11Q96FC9 AC073311.1-201ENST00000420146 505 ntTSL 5 BASIC4.76□□□□□ -1.65
DDX11Q96FC9 AC011243.1-201ENST00000420184 415 ntTSL 3 BASIC4.76□□□□□ -1.65
DDX11Q96FC9 RPL7P28-201ENST00000437739 740 ntBASIC4.76□□□□□ -1.65
DDX11Q96FC9 TRAPPC2P3-201ENST00000443200 321 ntBASIC4.76□□□□□ -1.65
DDX11Q96FC9 RPL36AP13-201ENST00000457490 317 ntBASIC4.76□□□□□ -1.65
DDX11Q96FC9 RPS29P15-201ENST00000458329 171 ntBASIC4.76□□□□□ -1.65
DDX11Q96FC9 RNU7-152P-201ENST00000458982 64 ntBASIC4.76□□□□□ -1.65
DDX11Q96FC9 RNU6-333P-201ENST00000459117 107 ntBASIC4.76□□□□□ -1.65
DDX11Q96FC9 AL049714.1-201ENST00000466686 347 ntBASIC4.76□□□□□ -1.65
DDX11Q96FC9 AC091885.1-201ENST00000506658 268 ntBASIC4.76□□□□□ -1.65
DDX11Q96FC9 GYPA-208ENST00000512064 441 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
DDX11Q96FC9 AC016065.2-201ENST00000514530 444 ntBASIC4.76□□□□□ -1.65
DDX11Q96FC9 AC103957.1-201ENST00000517681 503 ntTSL 3 BASIC4.76□□□□□ -1.65
DDX11Q96FC9 AC109466.1-211ENST00000519327 496 ntTSL 3 BASIC4.76□□□□□ -1.65
DDX11Q96FC9 RPL7P20-201ENST00000520308 745 ntBASIC4.76□□□□□ -1.65
DDX11Q96FC9 AC013762.1-201ENST00000531136 467 ntTSL 3 BASIC4.76□□□□□ -1.65
DDX11Q96FC9 AL132780.1-202ENST00000548322 591 ntTSL 4 BASIC4.76□□□□□ -1.65
DDX11Q96FC9 SETP2-201ENST00000553886 926 ntBASIC4.76□□□□□ -1.65
DDX11Q96FC9 AP005059.2-201ENST00000577527 578 ntTSL 3 BASIC4.76□□□□□ -1.65
DDX11Q96FC9 AC008737.2-201ENST00000599446 118 ntBASIC4.76□□□□□ -1.65
DDX11Q96FC9 AL589935.1-202ENST00000612512 393 ntTSL 5 BASIC4.76□□□□□ -1.65
DDX11Q96FC9 MSANTD4-206ENST00000617528 508 ntTSL 5 BASIC4.76□□□□□ -1.65
DDX11Q96FC9 ATM-230ENST00000640388 578 ntTSL 5 BASIC4.76□□□□□ -1.65
DDX11Q96FC9 KIF15-203ENST00000425755 3460 ntTSL 5 BASIC4.76□□□□□ -1.65
DDX11Q96FC9 MAP3K21-201ENST00000366622 4005 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
DDX11Q96FC9 STXBP4-201ENST00000376352 15590 ntAPPRIS P1 TSL 2 BASIC4.76□□□□□ -1.65
DDX11Q96FC9 SKP1-209ENST00000522552 1683 ntAPPRIS ALT1 TSL 1 (best) BASIC4.76□□□□□ -1.65
DDX11Q96FC9 ZC3H11A-214ENST00000639812 11825 ntAPPRIS P1 TSL 5 BASIC4.76□□□□□ -1.65
DDX11Q96FC9 FAM91A3P-201ENST00000456826 2544 ntBASIC4.76□□□□□ -1.65
DDX11Q96FC9 FAR2-203ENST00000547116 1787 ntTSL 2 BASIC4.76□□□□□ -1.65
DDX11Q96FC9 ADGRL2-208ENST00000370725 5293 ntAPPRIS ALT2 TSL 5 BASIC4.75□□□□□ -1.65
DDX11Q96FC9 LINC02120-201ENST00000505518 2008 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
DDX11Q96FC9 THOC1-221ENST00000631280 2011 ntTSL 5 BASIC4.75□□□□□ -1.65
DDX11Q96FC9 C1D-201ENST00000355848 2233 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
DDX11Q96FC9 RNU6-463P-201ENST00000384340 107 ntBASIC4.75□□□□□ -1.65
DDX11Q96FC9 MIR454-201ENST00000390180 115 ntBASIC4.75□□□□□ -1.65
DDX11Q96FC9 UBE2V1P2-201ENST00000397758 440 ntBASIC4.75□□□□□ -1.65
DDX11Q96FC9 SNORA3C-201ENST00000408792 125 ntBASIC4.75□□□□□ -1.65
DDX11Q96FC9 RPS3AP52-201ENST00000435639 297 ntBASIC4.75□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 129.6 ms