Protein–RNA interactions for Protein: Q96CF2

CHMP4C, Charged multivesicular body protein 4c, humanhuman

Predictions only

Length 233 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4CQ96CF2 RNA5SP468-201ENST00000516782 93 ntBASIC4.39□□□□□ -1.71
CHMP4CQ96CF2 RN7SKP289-201ENST00000517244 295 ntBASIC4.39□□□□□ -1.71
CHMP4CQ96CF2 AC022360.2-202ENST00000517308 407 ntTSL 3 BASIC4.39□□□□□ -1.71
CHMP4CQ96CF2 AC060765.1-201ENST00000522776 544 ntTSL 4 BASIC4.39□□□□□ -1.71
CHMP4CQ96CF2 OR5G4P-201ENST00000525251 760 ntBASIC4.39□□□□□ -1.71
CHMP4CQ96CF2 TAS2R43-201ENST00000531678 1027 ntAPPRIS P1 BASIC4.39□□□□□ -1.71
CHMP4CQ96CF2 AC215217.1-201ENST00000562162 347 ntTSL 3 BASIC4.39□□□□□ -1.71
CHMP4CQ96CF2 AC003687.1-201ENST00000578040 427 ntTSL 3 BASIC4.39□□□□□ -1.71
CHMP4CQ96CF2 KLKP1-201ENST00000595979 403 ntBASIC4.39□□□□□ -1.71
CHMP4CQ96CF2 BDH2P1-201ENST00000602288 736 ntBASIC4.39□□□□□ -1.71
CHMP4CQ96CF2 AC012507.3-201ENST00000603556 477 ntBASIC4.39□□□□□ -1.71
CHMP4CQ96CF2 AP002360.4-201ENST00000606980 481 ntBASIC4.39□□□□□ -1.71
CHMP4CQ96CF2 AC004696.1-201ENST00000614345 607 ntBASIC4.39□□□□□ -1.71
CHMP4CQ96CF2 U6atac.1-201ENST00000616025 117 ntBASIC4.39□□□□□ -1.71
CHMP4CQ96CF2 LINC01002-206ENST00000631772 539 ntTSL 4 BASIC4.39□□□□□ -1.71
CHMP4CQ96CF2 AL732372.2-225ENST00000642124 456 ntBASIC4.39□□□□□ -1.71
CHMP4CQ96CF2 ZBTB20-201ENST00000357258 27125 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
CHMP4CQ96CF2 THOC1-219ENST00000616322 2078 ntAPPRIS ALT1 TSL 5 BASIC4.39□□□□□ -1.71
CHMP4CQ96CF2 LBR-202ENST00000338179 3812 ntAPPRIS P1 TSL 5 BASIC4.39□□□□□ -1.71
CHMP4CQ96CF2 DENND2C-203ENST00000393277 4730 ntTSL 5 BASIC4.38□□□□□ -1.71
CHMP4CQ96CF2 SYNE1-212ENST00000423061 27436 ntAPPRIS ALT2 TSL 1 (best) BASIC4.38□□□□□ -1.71
CHMP4CQ96CF2 ZNF85-201ENST00000300540 1531 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
CHMP4CQ96CF2 MS4A5-201ENST00000300190 722 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
CHMP4CQ96CF2 AC073343.1-201ENST00000328239 651 ntBASIC4.38□□□□□ -1.71
CHMP4CQ96CF2 RNU5E-6P-201ENST00000365574 115 ntBASIC4.38□□□□□ -1.71
CHMP4CQ96CF2 TSHB-202ENST00000369517 474 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
CHMP4CQ96CF2 MIR181A1-201ENST00000385026 110 ntBASIC4.38□□□□□ -1.71
CHMP4CQ96CF2 MTHFD2P2-201ENST00000407725 247 ntBASIC4.38□□□□□ -1.71
CHMP4CQ96CF2 AL365356.1-201ENST00000411512 736 ntTSL 3 BASIC4.38□□□□□ -1.71
CHMP4CQ96CF2 AL158839.1-201ENST00000413943 575 ntTSL 2 BASIC4.38□□□□□ -1.71
CHMP4CQ96CF2 UBE2V1P10-201ENST00000414685 269 ntBASIC4.38□□□□□ -1.71
CHMP4CQ96CF2 RPL27AP8-201ENST00000424277 446 ntBASIC4.38□□□□□ -1.71
CHMP4CQ96CF2 AL451062.2-201ENST00000427515 271 ntBASIC4.38□□□□□ -1.71
CHMP4CQ96CF2 MED13P1-201ENST00000428342 171 ntBASIC4.38□□□□□ -1.71
CHMP4CQ96CF2 TIMM9P3-201ENST00000428659 274 ntBASIC4.38□□□□□ -1.71
CHMP4CQ96CF2 RPL23AP30-201ENST00000432419 501 ntBASIC4.38□□□□□ -1.71
CHMP4CQ96CF2 HMGN2P31-201ENST00000432430 273 ntBASIC4.38□□□□□ -1.71
CHMP4CQ96CF2 CXorf51B-201ENST00000438525 436 ntAPPRIS P1 TSL 2 BASIC4.38□□□□□ -1.71
CHMP4CQ96CF2 ACBD3-AS1-201ENST00000440540 535 ntTSL 5 BASIC4.38□□□□□ -1.71
CHMP4CQ96CF2 AC034195.1-202ENST00000451031 610 ntTSL 3 BASIC4.38□□□□□ -1.71
CHMP4CQ96CF2 AC023598.1-201ENST00000472521 361 ntBASIC4.38□□□□□ -1.71
CHMP4CQ96CF2 AC126182.1-201ENST00000478134 357 ntBASIC4.38□□□□□ -1.71
CHMP4CQ96CF2 AC092666.1-202ENST00000493400 442 ntTSL 2 BASIC4.38□□□□□ -1.71
CHMP4CQ96CF2 AP001086.1-201ENST00000494882 321 ntBASIC4.38□□□□□ -1.71
CHMP4CQ96CF2 AC010468.2-201ENST00000511981 438 ntTSL 2 BASIC4.38□□□□□ -1.71
CHMP4CQ96CF2 LEF1-218ENST00000512172 598 ntTSL 2 BASIC4.38□□□□□ -1.71
CHMP4CQ96CF2 SNORA70.18-201ENST00000516696 98 ntBASIC4.38□□□□□ -1.71
CHMP4CQ96CF2 RNU6-1092P-201ENST00000516955 87 ntBASIC4.38□□□□□ -1.71
CHMP4CQ96CF2 MTND1P5-201ENST00000517906 940 ntBASIC4.38□□□□□ -1.71
CHMP4CQ96CF2 AC022679.1-202ENST00000520251 376 ntTSL 3 BASIC4.38□□□□□ -1.71
CHMP4CQ96CF2 AP001893.2-201ENST00000526949 202 ntBASIC4.38□□□□□ -1.71
CHMP4CQ96CF2 OR4R1P-201ENST00000529879 463 ntBASIC4.38□□□□□ -1.71
CHMP4CQ96CF2 AC023796.2-201ENST00000545410 451 ntTSL 3 BASIC4.38□□□□□ -1.71
CHMP4CQ96CF2 AC055876.1-202ENST00000567053 138 ntBASIC4.38□□□□□ -1.71
CHMP4CQ96CF2 AC005951.2-201ENST00000576282 495 ntBASIC4.38□□□□□ -1.71
CHMP4CQ96CF2 AC011824.2-201ENST00000579896 579 ntTSL 4 BASIC4.38□□□□□ -1.71
CHMP4CQ96CF2 AC004542.2-201ENST00000602847 546 ntTSL 3 BASIC4.38□□□□□ -1.71
CHMP4CQ96CF2 AC126118.1-201ENST00000607744 628 ntBASIC4.38□□□□□ -1.71
CHMP4CQ96CF2 AF250324.2-201ENST00000608299 610 ntBASIC4.38□□□□□ -1.71
CHMP4CQ96CF2 AC092794.1-201ENST00000612734 582 ntBASIC4.38□□□□□ -1.71
CHMP4CQ96CF2 GPR171-203ENST00000617554 960 ntAPPRIS P1 BASIC4.38□□□□□ -1.71
CHMP4CQ96CF2 AL359880.1-201ENST00000621879 266 ntBASIC4.38□□□□□ -1.71
CHMP4CQ96CF2 AC048347.1-201ENST00000624621 427 ntBASIC4.38□□□□□ -1.71
CHMP4CQ96CF2 TPTE2-203ENST00000390680 1558 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
CHMP4CQ96CF2 SULT1B1-201ENST00000310613 7115 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
CHMP4CQ96CF2 AC004160.1-212ENST00000421121 2078 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
CHMP4CQ96CF2 CCDC110-202ENST00000393540 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC4.37□□□□□ -1.71
CHMP4CQ96CF2 NAIP-205ENST00000508426 4153 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
CHMP4CQ96CF2 RAD17-202ENST00000305138 3164 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
CHMP4CQ96CF2 FAM214A-216ENST00000619572 3548 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
CHMP4CQ96CF2 AC007823.1-201ENST00000569932 1566 ntBASIC4.37□□□□□ -1.71
CHMP4CQ96CF2 C5orf51-201ENST00000381647 5241 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
CHMP4CQ96CF2 AKAP14-202ENST00000371422 412 ntAPPRIS ALT2 TSL 1 (best) BASIC4.37□□□□□ -1.71
CHMP4CQ96CF2 RNU6-328P-201ENST00000390887 106 ntBASIC4.37□□□□□ -1.71
CHMP4CQ96CF2 OR5H8-201ENST00000394191 1045 ntAPPRIS P1 BASIC4.37□□□□□ -1.71
CHMP4CQ96CF2 RPL17P50-201ENST00000396131 546 ntBASIC4.37□□□□□ -1.71
CHMP4CQ96CF2 SYF2P2-201ENST00000417620 583 ntBASIC4.37□□□□□ -1.71
CHMP4CQ96CF2 MTATP6P18-201ENST00000417994 673 ntBASIC4.37□□□□□ -1.71
CHMP4CQ96CF2 AL445123.1-201ENST00000422023 446 ntTSL 2 BASIC4.37□□□□□ -1.71
CHMP4CQ96CF2 LINC01351-201ENST00000424735 526 ntTSL 2 BASIC4.37□□□□□ -1.71
CHMP4CQ96CF2 USP9YP28-201ENST00000435142 589 ntBASIC4.37□□□□□ -1.71
CHMP4CQ96CF2 AC099566.1-201ENST00000442558 479 ntTSL 3 BASIC4.37□□□□□ -1.71
CHMP4CQ96CF2 AC092264.1-201ENST00000456002 713 ntTSL 5 BASIC4.37□□□□□ -1.71
CHMP4CQ96CF2 AL034349.1-201ENST00000458367 549 ntTSL 5 BASIC4.37□□□□□ -1.71
CHMP4CQ96CF2 RPS20P20-201ENST00000460498 340 ntBASIC4.37□□□□□ -1.71
CHMP4CQ96CF2 ABCA17P-206ENST00000512848 467 ntTSL 2 BASIC4.37□□□□□ -1.71
CHMP4CQ96CF2 AP003469.3-201ENST00000518090 473 ntTSL 3 BASIC4.37□□□□□ -1.71
CHMP4CQ96CF2 AC087318.1-201ENST00000536786 389 ntTSL 3 BASIC4.37□□□□□ -1.71
CHMP4CQ96CF2 AL445074.1-201ENST00000555362 318 ntTSL 2 BASIC4.37□□□□□ -1.71
CHMP4CQ96CF2 TPRKBP2-201ENST00000565969 475 ntBASIC4.37□□□□□ -1.71
CHMP4CQ96CF2 AC107304.1-201ENST00000604229 296 ntBASIC4.37□□□□□ -1.71
CHMP4CQ96CF2 AC244093.3-201ENST00000615419 411 ntTSL 3 BASIC4.37□□□□□ -1.71
CHMP4CQ96CF2 AL357559.1-201ENST00000622228 274 ntBASIC4.37□□□□□ -1.71
CHMP4CQ96CF2 AL157786.1-207ENST00000627771 695 ntBASIC4.37□□□□□ -1.71
CHMP4CQ96CF2 AC009093.8-201ENST00000641769 292 ntBASIC4.37□□□□□ -1.71
CHMP4CQ96CF2 LATS1-201ENST00000253339 4256 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
CHMP4CQ96CF2 CHD9-213ENST00000564845 11504 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
CHMP4CQ96CF2 FAM71D-211ENST00000612183 1790 ntAPPRIS P1 TSL 2 BASIC4.37□□□□□ -1.71
CHMP4CQ96CF2 OR4G2P-202ENST00000641004 1759 ntBASIC4.37□□□□□ -1.71
CHMP4CQ96CF2 CEP44-201ENST00000296519 4173 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 106 ms