Protein–RNA interactions for Protein: Q92889

ERCC4, DNA repair endonuclease XPF, humanhuman

Predicted RBP Predictions only

Length 916 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC4Q92889 RPS11P1-201ENST00000451072 473 ntBASIC4.5□□□□□ -1.69
ERCC4Q92889 SNORD97-201ENST00000459187 142 ntBASIC4.5□□□□□ -1.69
ERCC4Q92889 RNU6-329P-201ENST00000459618 107 ntBASIC4.5□□□□□ -1.69
ERCC4Q92889 RPS27AP1-201ENST00000475545 471 ntBASIC4.5□□□□□ -1.69
ERCC4Q92889 BTBD11-206ENST00000494235 811 ntTSL 2 BASIC4.5□□□□□ -1.69
ERCC4Q92889 RPL7P47-201ENST00000497299 556 ntBASIC4.5□□□□□ -1.69
ERCC4Q92889 HMGN1P13-201ENST00000505795 138 ntBASIC4.5□□□□□ -1.69
ERCC4Q92889 AC103851.1-201ENST00000506833 274 ntBASIC4.5□□□□□ -1.69
ERCC4Q92889 AC024587.2-201ENST00000509458 805 ntTSL 3 BASIC4.5□□□□□ -1.69
ERCC4Q92889 AC004704.1-201ENST00000511219 583 ntTSL 3 BASIC4.5□□□□□ -1.69
ERCC4Q92889 RN7SKP122-201ENST00000515923 296 ntBASIC4.5□□□□□ -1.69
ERCC4Q92889 Y_RNA.665-201ENST00000516177 98 ntBASIC4.5□□□□□ -1.69
ERCC4Q92889 Y_RNA.691-201ENST00000516611 103 ntBASIC4.5□□□□□ -1.69
ERCC4Q92889 RNU6-1153P-201ENST00000516760 105 ntBASIC4.5□□□□□ -1.69
ERCC4Q92889 AC023442.3-203ENST00000530946 533 ntTSL 4 BASIC4.5□□□□□ -1.69
ERCC4Q92889 LINC02305-201ENST00000554142 476 ntTSL 3 BASIC4.5□□□□□ -1.69
ERCC4Q92889 SCOCP1-201ENST00000554676 349 ntBASIC4.5□□□□□ -1.69
ERCC4Q92889 MIR4742-201ENST00000581069 85 ntBASIC4.5□□□□□ -1.69
ERCC4Q92889 AC087749.1-202ENST00000585020 566 ntTSL 2 BASIC4.5□□□□□ -1.69
ERCC4Q92889 AC103710.3-201ENST00000608157 948 ntBASIC4.5□□□□□ -1.69
ERCC4Q92889 U73479.1-201ENST00000618062 168 ntBASIC4.5□□□□□ -1.69
ERCC4Q92889 FRG1KP-201ENST00000623592 341 ntBASIC4.5□□□□□ -1.69
ERCC4Q92889 VPS8-228ENST00000628962 207 ntTSL 5 BASIC4.5□□□□□ -1.69
ERCC4Q92889 FMNL2-202ENST00000475377 3648 ntTSL 5 BASIC4.5□□□□□ -1.69
ERCC4Q92889 SEC31A-215ENST00000505472 4159 ntTSL 5 BASIC4.5□□□□□ -1.69
ERCC4Q92889 LRMP-201ENST00000354454 2504 ntAPPRIS P2 TSL 1 (best) BASIC4.49□□□□□ -1.69
ERCC4Q92889 ABCA12-202ENST00000389661 7005 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
ERCC4Q92889 QKI-202ENST00000361195 1063 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
ERCC4Q92889 MIR383-201ENST00000362257 73 ntBASIC4.49□□□□□ -1.69
ERCC4Q92889 Y_RNA.100-201ENST00000363141 102 ntBASIC4.49□□□□□ -1.69
ERCC4Q92889 HSPE1P12-201ENST00000412576 301 ntBASIC4.49□□□□□ -1.69
ERCC4Q92889 AC064875.1-202ENST00000421112 561 ntTSL 4 BASIC4.49□□□□□ -1.69
ERCC4Q92889 BEND7P1-201ENST00000422058 457 ntBASIC4.49□□□□□ -1.69
ERCC4Q92889 LINC01817-201ENST00000429317 564 ntTSL 4 BASIC4.49□□□□□ -1.69
ERCC4Q92889 TTTY20-201ENST00000434487 259 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
ERCC4Q92889 HCG2040054-201ENST00000435331 434 ntTSL 3 BASIC4.49□□□□□ -1.69
ERCC4Q92889 RNA5SP143-201ENST00000516936 115 ntBASIC4.49□□□□□ -1.69
ERCC4Q92889 RNU6-1092P-201ENST00000516955 87 ntBASIC4.49□□□□□ -1.69
ERCC4Q92889 BTF3P12-201ENST00000519620 469 ntBASIC4.49□□□□□ -1.69
ERCC4Q92889 AP001783.1-202ENST00000534620 408 ntTSL 2 BASIC4.49□□□□□ -1.69
ERCC4Q92889 LINC02442-202ENST00000540761 382 ntTSL 2 BASIC4.49□□□□□ -1.69
ERCC4Q92889 SPTY2D1-AS1-203ENST00000542172 331 ntAPPRIS ALT2 TSL 1 (best) BASIC4.49□□□□□ -1.69
ERCC4Q92889 AC008083.3-202ENST00000552063 277 ntTSL 3 BASIC4.49□□□□□ -1.69
ERCC4Q92889 AL160237.1-201ENST00000554526 572 ntTSL 4 BASIC4.49□□□□□ -1.69
ERCC4Q92889 hsa-mir-3119-1.1-201ENST00000577602 85 ntBASIC4.49□□□□□ -1.69
ERCC4Q92889 AP001021.1-201ENST00000577704 244 ntTSL 3 BASIC4.49□□□□□ -1.69
ERCC4Q92889 RN7SL600P-201ENST00000581811 299 ntBASIC4.49□□□□□ -1.69
ERCC4Q92889 AC022150.3-201ENST00000599143 880 ntTSL 5 BASIC4.49□□□□□ -1.69
ERCC4Q92889 AL034351.1-201ENST00000605288 668 ntBASIC4.49□□□□□ -1.69
ERCC4Q92889 ARF4P1-201ENST00000605447 541 ntBASIC4.49□□□□□ -1.69
ERCC4Q92889 AL360267.1-201ENST00000607309 666 ntTSL 4 BASIC4.49□□□□□ -1.69
ERCC4Q92889 TTN-AS1-263ENST00000627527 784 ntTSL 5 BASIC4.49□□□□□ -1.69
ERCC4Q92889 MIR6830-201ENST00000636015 70 ntBASIC4.49□□□□□ -1.69
ERCC4Q92889 MTCO1P9-201ENST00000505577 1534 ntBASIC4.49□□□□□ -1.69
ERCC4Q92889 BRCA2-206ENST00000544455 10984 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
ERCC4Q92889 CNGA1-201ENST00000358519 2627 ntAPPRIS P3 TSL 1 (best) BASIC4.49□□□□□ -1.69
ERCC4Q92889 AL589740.1-207ENST00000607823 1962 ntTSL 5 BASIC4.49□□□□□ -1.69
ERCC4Q92889 SPAM1-202ENST00000340011 2349 ntAPPRIS P4 TSL 1 (best) BASIC4.49□□□□□ -1.69
ERCC4Q92889 MIR181A1HG-203ENST00000436880 2308 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
ERCC4Q92889 ST7-221ENST00000465133 2155 ntTSL 5 BASIC4.48□□□□□ -1.69
ERCC4Q92889 RMDN2-204ENST00000406384 1932 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
ERCC4Q92889 SLC38A9-201ENST00000318672 2369 ntAPPRIS P1 TSL 2 BASIC4.48□□□□□ -1.69
ERCC4Q92889 PRRG1-202ENST00000449135 4481 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
ERCC4Q92889 RNU6-1155P-201ENST00000363554 107 ntBASIC4.48□□□□□ -1.69
ERCC4Q92889 RNU6-263P-201ENST00000363811 107 ntBASIC4.48□□□□□ -1.69
ERCC4Q92889 RNA5SP399-201ENST00000364003 117 ntBASIC4.48□□□□□ -1.69
ERCC4Q92889 RNU6-61P-201ENST00000365528 109 ntBASIC4.48□□□□□ -1.69
ERCC4Q92889 Y_RNA.474-201ENST00000384341 102 ntBASIC4.48□□□□□ -1.69
ERCC4Q92889 RNU6-328P-201ENST00000390887 106 ntBASIC4.48□□□□□ -1.69
ERCC4Q92889 AL356057.2-201ENST00000403318 432 ntBASIC4.48□□□□□ -1.69
ERCC4Q92889 FAT1P1-201ENST00000406588 507 ntBASIC4.48□□□□□ -1.69
ERCC4Q92889 RNU4-65P-201ENST00000410473 140 ntBASIC4.48□□□□□ -1.69
ERCC4Q92889 RHEBP3-201ENST00000411920 351 ntBASIC4.48□□□□□ -1.69
ERCC4Q92889 NCOR1P3-201ENST00000420479 303 ntBASIC4.48□□□□□ -1.69
ERCC4Q92889 AC006037.1-201ENST00000437967 287 ntTSL 5 BASIC4.48□□□□□ -1.69
ERCC4Q92889 CLEC4E-202ENST00000446457 701 ntTSL 3 BASIC4.48□□□□□ -1.69
ERCC4Q92889 GAPDHP27-201ENST00000447427 1020 ntBASIC4.48□□□□□ -1.69
ERCC4Q92889 MTND1P18-201ENST00000448191 573 ntBASIC4.48□□□□□ -1.69
ERCC4Q92889 AL078587.1-201ENST00000448580 542 ntTSL 5 BASIC4.48□□□□□ -1.69
ERCC4Q92889 AC007547.1-201ENST00000462177 490 ntBASIC4.48□□□□□ -1.69
ERCC4Q92889 AC091167.1-201ENST00000492017 396 ntBASIC4.48□□□□□ -1.69
ERCC4Q92889 RPS15AP36-201ENST00000492022 382 ntBASIC4.48□□□□□ -1.69
ERCC4Q92889 FAM206BP-201ENST00000510179 541 ntBASIC4.48□□□□□ -1.69
ERCC4Q92889 RNU4-49P-201ENST00000516080 140 ntBASIC4.48□□□□□ -1.69
ERCC4Q92889 RNU6-1095P-201ENST00000516148 108 ntBASIC4.48□□□□□ -1.69
ERCC4Q92889 AC103783.1-201ENST00000520506 373 ntBASIC4.48□□□□□ -1.69
ERCC4Q92889 AC009597.1-201ENST00000521215 584 ntTSL 4 BASIC4.48□□□□□ -1.69
ERCC4Q92889 AC021242.2-203ENST00000521842 687 ntTSL 3 BASIC4.48□□□□□ -1.69
ERCC4Q92889 AP003715.1-201ENST00000532109 435 ntTSL 3 BASIC4.48□□□□□ -1.69
ERCC4Q92889 PRB1-204ENST00000546254 1170 ntAPPRIS ALT2 TSL 5 BASIC4.48□□□□□ -1.69
ERCC4Q92889 AC073655.2-202ENST00000547927 401 ntTSL 3 BASIC4.48□□□□□ -1.69
ERCC4Q92889 AC079598.1-201ENST00000548691 554 ntTSL 4 BASIC4.48□□□□□ -1.69
ERCC4Q92889 PARP1P2-201ENST00000556806 195 ntBASIC4.48□□□□□ -1.69
ERCC4Q92889 NCAPGP2-201ENST00000557911 754 ntBASIC4.48□□□□□ -1.69
ERCC4Q92889 AC076968.1-201ENST00000566418 429 ntTSL 5 BASIC4.48□□□□□ -1.69
ERCC4Q92889 AL355375.2-201ENST00000574825 175 ntBASIC4.48□□□□□ -1.69
ERCC4Q92889 AC023575.1-201ENST00000580510 358 ntBASIC4.48□□□□□ -1.69
ERCC4Q92889 MIR3138-201ENST00000585238 82 ntBASIC4.48□□□□□ -1.69
ERCC4Q92889 AC010928.3-201ENST00000587712 541 ntBASIC4.48□□□□□ -1.69
ERCC4Q92889 AC012669.1-201ENST00000603209 283 ntBASIC4.48□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 136.7 ms