Protein–RNA interactions for Protein: Q8TER0

SNED1, Sushi, nidogen and EGF-like domain-containing protein 1, humanhuman

Predictions only

Length 1,413 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNED1Q8TER0 SNORA70.14-201ENST00000516205 110 ntBASIC3.39□□□□□ -1.87
SNED1Q8TER0 AC091534.1-202ENST00000549953 468 ntTSL 5 BASIC3.39□□□□□ -1.87
SNED1Q8TER0 AC107023.1-201ENST00000552757 356 ntTSL 5 BASIC3.39□□□□□ -1.87
SNED1Q8TER0 AC007493.1-202ENST00000567899 517 ntTSL 2 BASIC3.39□□□□□ -1.87
SNED1Q8TER0 SNORA59B-202ENST00000578183 701 ntBASIC3.39□□□□□ -1.87
SNED1Q8TER0 AC092364.1-201ENST00000598561 471 ntTSL 3 BASIC3.39□□□□□ -1.87
SNED1Q8TER0 AL022154.1-201ENST00000604698 785 ntBASIC3.39□□□□□ -1.87
SNED1Q8TER0 AP000860.1-201ENST00000605250 559 ntBASIC3.39□□□□□ -1.87
SNED1Q8TER0 AC110741.2-201ENST00000605278 268 ntBASIC3.39□□□□□ -1.87
SNED1Q8TER0 AC024560.3-201ENST00000608482 349 ntBASIC3.39□□□□□ -1.87
SNED1Q8TER0 AC063943.3-201ENST00000615562 356 ntBASIC3.39□□□□□ -1.87
SNED1Q8TER0 AC092794.2-201ENST00000620933 563 ntBASIC3.39□□□□□ -1.87
SNED1Q8TER0 AC073348.1-201ENST00000623002 331 ntBASIC3.39□□□□□ -1.87
SNED1Q8TER0 AC064859.1-201ENST00000624741 174 ntBASIC3.39□□□□□ -1.87
SNED1Q8TER0 CFHR4-204ENST00000608469 1601 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
SNED1Q8TER0 CACNB4-222ENST00000636350 7654 ntTSL 5 BASIC3.39□□□□□ -1.87
SNED1Q8TER0 SLCO1B1-201ENST00000256958 2229 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
SNED1Q8TER0 PABPC1P7-201ENST00000413177 1513 ntBASIC3.39□□□□□ -1.87
SNED1Q8TER0 AGTPBP1-205ENST00000376083 4208 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
SNED1Q8TER0 KIAA0586-215ENST00000619722 5597 ntAPPRIS ALT2 TSL 2 BASIC3.39□□□□□ -1.87
SNED1Q8TER0 MTND5P26-201ENST00000426018 1752 ntBASIC3.39□□□□□ -1.87
SNED1Q8TER0 NBPF20-201ENST00000369373 18760 ntAPPRIS ALT2 TSL 5 BASIC3.39□□□□□ -1.87
SNED1Q8TER0 LTN1-201ENST00000361371 7685 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
SNED1Q8TER0 STARD6-201ENST00000307844 663 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
SNED1Q8TER0 RNU6-501P-201ENST00000364072 100 ntBASIC3.38□□□□□ -1.87
SNED1Q8TER0 RNU6-114P-201ENST00000384704 105 ntBASIC3.38□□□□□ -1.87
SNED1Q8TER0 MIR16-1-201ENST00000385271 89 ntBASIC3.38□□□□□ -1.87
SNED1Q8TER0 RNU6-1300P-201ENST00000391046 108 ntBASIC3.38□□□□□ -1.87
SNED1Q8TER0 SNORD115-47-201ENST00000391226 86 ntBASIC3.38□□□□□ -1.87
SNED1Q8TER0 RN7SKP58-201ENST00000411010 305 ntBASIC3.38□□□□□ -1.87
SNED1Q8TER0 MAGI2-AS2-201ENST00000411616 476 ntTSL 2 BASIC3.38□□□□□ -1.87
SNED1Q8TER0 RPL31P2-201ENST00000413849 377 ntBASIC3.38□□□□□ -1.87
SNED1Q8TER0 HMGB3P23-201ENST00000414981 585 ntBASIC3.38□□□□□ -1.87
SNED1Q8TER0 MTCYBP24-201ENST00000420387 1106 ntBASIC3.38□□□□□ -1.87
SNED1Q8TER0 AC244098.2-201ENST00000422068 99 ntBASIC3.38□□□□□ -1.87
SNED1Q8TER0 AP001136.1-201ENST00000425058 635 ntTSL 2 BASIC3.38□□□□□ -1.87
SNED1Q8TER0 BLOC1S2P1-201ENST00000428431 301 ntBASIC3.38□□□□□ -1.87
SNED1Q8TER0 LINC01797-202ENST00000433432 765 ntTSL 3 BASIC3.38□□□□□ -1.87
SNED1Q8TER0 AC104653.2-201ENST00000435407 416 ntTSL 3 BASIC3.38□□□□□ -1.87
SNED1Q8TER0 CEACAMP4-201ENST00000457676 421 ntBASIC3.38□□□□□ -1.87
SNED1Q8TER0 HTN1-204ENST00000511674 623 ntAPPRIS P1 TSL 2 BASIC3.38□□□□□ -1.87
SNED1Q8TER0 AC010210.1-203ENST00000513905 260 ntTSL 3 BASIC3.38□□□□□ -1.87
SNED1Q8TER0 RNA5SP282-201ENST00000516355 108 ntBASIC3.38□□□□□ -1.87
SNED1Q8TER0 RNA5SP148-201ENST00000516527 94 ntBASIC3.38□□□□□ -1.87
SNED1Q8TER0 AC104211.1-202ENST00000521307 866 ntTSL 3 BASIC3.38□□□□□ -1.87
SNED1Q8TER0 AC011363.1-201ENST00000524198 458 ntTSL 5 BASIC3.38□□□□□ -1.87
SNED1Q8TER0 AP003122.3-201ENST00000526316 255 ntBASIC3.38□□□□□ -1.87
SNED1Q8TER0 AP002453.2-201ENST00000533503 320 ntBASIC3.38□□□□□ -1.87
SNED1Q8TER0 AC022367.1-202ENST00000535066 537 ntTSL 3 BASIC3.38□□□□□ -1.87
SNED1Q8TER0 AC022509.2-201ENST00000540392 699 ntTSL 3 BASIC3.38□□□□□ -1.87
SNED1Q8TER0 MRPL42-204ENST00000548545 692 ntAPPRIS ALT1 TSL 2 BASIC3.38□□□□□ -1.87
SNED1Q8TER0 LINC00640-203ENST00000556479 576 ntTSL 2 BASIC3.38□□□□□ -1.87
SNED1Q8TER0 AC016987.2-201ENST00000560696 351 ntTSL 3 BASIC3.38□□□□□ -1.87
SNED1Q8TER0 BPTFP1-201ENST00000579209 492 ntBASIC3.38□□□□□ -1.87
SNED1Q8TER0 MIR548AB-201ENST00000584917 84 ntBASIC3.38□□□□□ -1.87
SNED1Q8TER0 AC104365.1-201ENST00000588835 394 ntTSL 5 BASIC3.38□□□□□ -1.87
SNED1Q8TER0 AC105094.2-203ENST00000590357 555 ntTSL 4 BASIC3.38□□□□□ -1.87
SNED1Q8TER0 ZEB2-AS1-204ENST00000595109 855 ntTSL 5 BASIC3.38□□□□□ -1.87
SNED1Q8TER0 AL356055.1-201ENST00000602528 446 ntBASIC3.38□□□□□ -1.87
SNED1Q8TER0 SEPT7P9-203ENST00000604116 343 ntBASIC3.38□□□□□ -1.87
SNED1Q8TER0 AL157786.1-207ENST00000627771 695 ntBASIC3.38□□□□□ -1.87
SNED1Q8TER0 ROS1-202ENST00000368508 7435 ntAPPRIS P2 TSL 1 (best) BASIC3.38□□□□□ -1.87
SNED1Q8TER0 MTND4P29-201ENST00000503122 1372 ntBASIC3.38□□□□□ -1.87
SNED1Q8TER0 FBXL13-204ENST00000436908 2577 ntTSL 5 BASIC3.38□□□□□ -1.87
SNED1Q8TER0 SYT14-208ENST00000637265 13567 ntTSL 5 BASIC3.37□□□□□ -1.87
SNED1Q8TER0 OR13C4-201ENST00000277216 957 ntAPPRIS P1 BASIC3.37□□□□□ -1.87
SNED1Q8TER0 RPL21P132-201ENST00000331267 462 ntBASIC3.37□□□□□ -1.87
SNED1Q8TER0 RNU5D-1-201ENST00000363299 116 ntBASIC3.37□□□□□ -1.87
SNED1Q8TER0 MIR181A1-201ENST00000385026 110 ntBASIC3.37□□□□□ -1.87
SNED1Q8TER0 Y_RNA.582-201ENST00000391023 95 ntBASIC3.37□□□□□ -1.87
SNED1Q8TER0 AL139098.1-201ENST00000407291 389 ntBASIC3.37□□□□□ -1.87
SNED1Q8TER0 RNA5SP274-201ENST00000410484 108 ntBASIC3.37□□□□□ -1.87
SNED1Q8TER0 RNU6-272P-201ENST00000411028 104 ntBASIC3.37□□□□□ -1.87
SNED1Q8TER0 AC105271.1-202ENST00000411417 445 ntTSL 3 BASIC3.37□□□□□ -1.87
SNED1Q8TER0 HNRNPDLP1-201ENST00000412834 550 ntBASIC3.37□□□□□ -1.87
SNED1Q8TER0 RPL21P32-201ENST00000419877 477 ntBASIC3.37□□□□□ -1.87
SNED1Q8TER0 B3GALNT1P1-201ENST00000420569 975 ntBASIC3.37□□□□□ -1.87
SNED1Q8TER0 AC233981.1-201ENST00000423224 461 ntBASIC3.37□□□□□ -1.87
SNED1Q8TER0 AL365184.2-201ENST00000431139 435 ntBASIC3.37□□□□□ -1.87
SNED1Q8TER0 MTND3P21-201ENST00000433774 331 ntBASIC3.37□□□□□ -1.87
SNED1Q8TER0 B3GNT2P1-201ENST00000434960 952 ntBASIC3.37□□□□□ -1.87
SNED1Q8TER0 AC006458.1-201ENST00000445093 653 ntTSL 3 BASIC3.37□□□□□ -1.87
SNED1Q8TER0 AL034418.1-201ENST00000448675 860 ntBASIC3.37□□□□□ -1.87
SNED1Q8TER0 MTND5P20-201ENST00000448677 143 ntBASIC3.37□□□□□ -1.87
SNED1Q8TER0 AC125238.1-201ENST00000448842 249 ntBASIC3.37□□□□□ -1.87
SNED1Q8TER0 UTAT33-202ENST00000449177 565 ntTSL 2 BASIC3.37□□□□□ -1.87
SNED1Q8TER0 AC131571.1-202ENST00000454509 598 ntTSL 4 BASIC3.37□□□□□ -1.87
SNED1Q8TER0 BX248409.1-201ENST00000455497 255 ntBASIC3.37□□□□□ -1.87
SNED1Q8TER0 AL136164.1-201ENST00000456795 352 ntTSL 3 BASIC3.37□□□□□ -1.87
SNED1Q8TER0 ARPC3P2-201ENST00000457786 533 ntBASIC3.37□□□□□ -1.87
SNED1Q8TER0 AL049548.1-201ENST00000458194 385 ntTSL 2 BASIC3.37□□□□□ -1.87
SNED1Q8TER0 AL121769.1-201ENST00000469473 401 ntBASIC3.37□□□□□ -1.87
SNED1Q8TER0 RPS3AP17-201ENST00000472594 777 ntBASIC3.37□□□□□ -1.87
SNED1Q8TER0 AC099520.1-202ENST00000503650 777 ntTSL 3 BASIC3.37□□□□□ -1.87
SNED1Q8TER0 AC245166.1-201ENST00000521012 253 ntBASIC3.37□□□□□ -1.87
SNED1Q8TER0 AP004247.1-201ENST00000531556 1289 ntBASIC3.37□□□□□ -1.87
SNED1Q8TER0 AL359233.1-201ENST00000554029 364 ntTSL 3 BASIC3.37□□□□□ -1.87
SNED1Q8TER0 ZNF192P1-203ENST00000565888 810 ntBASIC3.37□□□□□ -1.87
SNED1Q8TER0 INTS6-AS1-210ENST00000595424 301 ntTSL 5 BASIC3.37□□□□□ -1.87
SNED1Q8TER0 AC107214.2-201ENST00000608204 634 ntBASIC3.37□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 86.5 ms