Protein–RNA interactions for Protein: Q8NDX5

PHC3, Polyhomeotic-like protein 3, humanhuman

Predictions only

Length 983 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHC3Q8NDX5 AL451062.2-201ENST00000427515 271 ntBASIC4.82□□□□□ -1.64
PHC3Q8NDX5 AL096678.1-201ENST00000438877 472 ntTSL 3 BASIC4.82□□□□□ -1.64
PHC3Q8NDX5 AL441989.1-201ENST00000454204 382 ntTSL 3 BASIC4.82□□□□□ -1.64
PHC3Q8NDX5 BTF3P15-201ENST00000455606 336 ntBASIC4.82□□□□□ -1.64
PHC3Q8NDX5 RPL23AP56-201ENST00000460778 453 ntBASIC4.82□□□□□ -1.64
PHC3Q8NDX5 RPS3AP41-201ENST00000462701 778 ntBASIC4.82□□□□□ -1.64
PHC3Q8NDX5 AL135752.1-201ENST00000479477 471 ntBASIC4.82□□□□□ -1.64
PHC3Q8NDX5 AC092451.1-201ENST00000480211 153 ntBASIC4.82□□□□□ -1.64
PHC3Q8NDX5 AL049874.1-201ENST00000489560 388 ntBASIC4.82□□□□□ -1.64
PHC3Q8NDX5 SNORA31.20-201ENST00000517111 133 ntBASIC4.82□□□□□ -1.64
PHC3Q8NDX5 AC113192.4-201ENST00000534666 547 ntTSL 4 BASIC4.82□□□□□ -1.64
PHC3Q8NDX5 AC093227.3-202ENST00000586606 704 ntAPPRIS P5 TSL 3 BASIC4.82□□□□□ -1.64
PHC3Q8NDX5 BNIP3P16-201ENST00000589779 534 ntBASIC4.82□□□□□ -1.64
PHC3Q8NDX5 AC073539.2-201ENST00000597113 165 ntBASIC4.82□□□□□ -1.64
PHC3Q8NDX5 Z98200.1-201ENST00000607298 470 ntBASIC4.82□□□□□ -1.64
PHC3Q8NDX5 AL132822.1-201ENST00000617063 513 ntBASIC4.82□□□□□ -1.64
PHC3Q8NDX5 AL031601.2-202ENST00000622650 282 ntBASIC4.82□□□□□ -1.64
PHC3Q8NDX5 FAM71D-211ENST00000612183 1790 ntAPPRIS P1 TSL 2 BASIC4.82□□□□□ -1.64
PHC3Q8NDX5 XIRP2-207ENST00000628543 12182 ntTSL 5 BASIC4.82□□□□□ -1.64
PHC3Q8NDX5 HGF-201ENST00000222390 5989 ntAPPRIS P3 TSL 1 (best) BASIC4.82□□□□□ -1.64
PHC3Q8NDX5 LINC00276-202ENST00000418420 3503 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
PHC3Q8NDX5 KCNJ6-201ENST00000609713 19645 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
PHC3Q8NDX5 SAMMSON-226ENST00000642089 1582 ntBASIC4.82□□□□□ -1.64
PHC3Q8NDX5 CASC1-204ENST00000395990 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC4.82□□□□□ -1.64
PHC3Q8NDX5 AC099654.2-201ENST00000433031 1980 ntBASIC4.82□□□□□ -1.64
PHC3Q8NDX5 USP44-201ENST00000258499 4022 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
PHC3Q8NDX5 TRIQK-211ENST00000520430 1829 ntAPPRIS P1 TSL 2 BASIC4.81□□□□□ -1.64
PHC3Q8NDX5 YWHAZ-211ENST00000457309 3007 ntAPPRIS P1 TSL 2 BASIC4.81□□□□□ -1.64
PHC3Q8NDX5 AL136964.1-201ENST00000622038 2990 ntBASIC4.81□□□□□ -1.64
PHC3Q8NDX5 ARHGAP42-203ENST00000524892 5685 ntTSL 5 BASIC4.81□□□□□ -1.64
PHC3Q8NDX5 AC138393.1-203ENST00000327086 343 ntBASIC4.81□□□□□ -1.64
PHC3Q8NDX5 RNU6-1309P-201ENST00000363305 108 ntBASIC4.81□□□□□ -1.64
PHC3Q8NDX5 Y_RNA.252-201ENST00000364556 101 ntBASIC4.81□□□□□ -1.64
PHC3Q8NDX5 RNU6-335P-201ENST00000364563 113 ntBASIC4.81□□□□□ -1.64
PHC3Q8NDX5 Y_RNA.404-201ENST00000383978 102 ntBASIC4.81□□□□□ -1.64
PHC3Q8NDX5 Y_RNA.463-201ENST00000384271 102 ntBASIC4.81□□□□□ -1.64
PHC3Q8NDX5 MIR578-201ENST00000384828 96 ntBASIC4.81□□□□□ -1.64
PHC3Q8NDX5 MIR301A-201ENST00000385261 86 ntBASIC4.81□□□□□ -1.64
PHC3Q8NDX5 TRAV7-201ENST00000390429 337 ntAPPRIS P1 BASIC4.81□□□□□ -1.64
PHC3Q8NDX5 MRPL42P3-201ENST00000401492 326 ntBASIC4.81□□□□□ -1.64
PHC3Q8NDX5 AL357515.1-201ENST00000402967 542 ntBASIC4.81□□□□□ -1.64
PHC3Q8NDX5 USMG5P1-201ENST00000425964 177 ntBASIC4.81□□□□□ -1.64
PHC3Q8NDX5 AC084149.1-201ENST00000437233 284 ntTSL 5 BASIC4.81□□□□□ -1.64
PHC3Q8NDX5 AL353152.1-201ENST00000455973 470 ntTSL 5 BASIC4.81□□□□□ -1.64
PHC3Q8NDX5 SNORD5.1-201ENST00000458800 75 ntBASIC4.81□□□□□ -1.64
PHC3Q8NDX5 RPS17P2-201ENST00000461663 408 ntBASIC4.81□□□□□ -1.64
PHC3Q8NDX5 RN7SL817P-201ENST00000480777 288 ntBASIC4.81□□□□□ -1.64
PHC3Q8NDX5 HMGB1P30-201ENST00000492455 606 ntBASIC4.81□□□□□ -1.64
PHC3Q8NDX5 AC093909.2-201ENST00000505178 437 ntTSL 3 BASIC4.81□□□□□ -1.64
PHC3Q8NDX5 AC092436.3-201ENST00000511788 257 ntBASIC4.81□□□□□ -1.64
PHC3Q8NDX5 LEF1-218ENST00000512172 598 ntTSL 2 BASIC4.81□□□□□ -1.64
PHC3Q8NDX5 CDH12P4-201ENST00000517835 295 ntBASIC4.81□□□□□ -1.64
PHC3Q8NDX5 CDH12P3-201ENST00000517935 295 ntBASIC4.81□□□□□ -1.64
PHC3Q8NDX5 IGKV2D-23-201ENST00000518179 286 ntBASIC4.81□□□□□ -1.64
PHC3Q8NDX5 AC027801.4-201ENST00000518420 395 ntTSL 5 BASIC4.81□□□□□ -1.64
PHC3Q8NDX5 CDH12P1-201ENST00000518435 295 ntBASIC4.81□□□□□ -1.64
PHC3Q8NDX5 KIRREL3-AS2-201ENST00000532988 492 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
PHC3Q8NDX5 FAM222A-AS1-202ENST00000541460 751 ntTSL 4 BASIC4.81□□□□□ -1.64
PHC3Q8NDX5 AC010653.1-201ENST00000571108 881 ntBASIC4.81□□□□□ -1.64
PHC3Q8NDX5 AC011933.3-201ENST00000578226 372 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
PHC3Q8NDX5 MIR3934-201ENST00000579806 107 ntBASIC4.81□□□□□ -1.64
PHC3Q8NDX5 AC005899.2-201ENST00000584353 90 ntBASIC4.81□□□□□ -1.64
PHC3Q8NDX5 RGS5-201ENST00000313961 5862 ntAPPRIS P3 TSL 1 (best) BASIC4.81□□□□□ -1.64
PHC3Q8NDX5 ANGPTL1-202ENST00000367629 2289 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
PHC3Q8NDX5 GHR-213ENST00000622294 4312 ntTSL 5 BASIC4.81□□□□□ -1.64
PHC3Q8NDX5 LRFN5-204ENST00000554171 4253 ntAPPRIS ALT2 TSL 1 (best) BASIC4.81□□□□□ -1.64
PHC3Q8NDX5 AC107068.1-201ENST00000563286 4218 ntBASIC4.81□□□□□ -1.64
PHC3Q8NDX5 PTPN22-201ENST00000359785 3654 ntAPPRIS P2 TSL 1 (best) BASIC4.81□□□□□ -1.64
PHC3Q8NDX5 ADAM18-201ENST00000265707 2388 ntAPPRIS P3 TSL 1 (best) BASIC4.8□□□□□ -1.64
PHC3Q8NDX5 NUP205-201ENST00000285968 6266 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
PHC3Q8NDX5 PRUNE2-208ENST00000443509 12356 ntAPPRIS ALT2 TSL 5 BASIC4.8□□□□□ -1.64
PHC3Q8NDX5 RNU6-490P-201ENST00000362985 107 ntBASIC4.8□□□□□ -1.64
PHC3Q8NDX5 RNU6-629P-201ENST00000384061 103 ntBASIC4.8□□□□□ -1.64
PHC3Q8NDX5 RNU6-196P-201ENST00000384315 107 ntBASIC4.8□□□□□ -1.64
PHC3Q8NDX5 RNU6-306P-201ENST00000384617 107 ntBASIC4.8□□□□□ -1.64
PHC3Q8NDX5 CXCL8-202ENST00000401931 700 ntAPPRIS ALT1 TSL 1 (best) BASIC4.8□□□□□ -1.64
PHC3Q8NDX5 RNA5SP239-201ENST00000410218 129 ntBASIC4.8□□□□□ -1.64
PHC3Q8NDX5 AL158839.1-201ENST00000413943 575 ntTSL 2 BASIC4.8□□□□□ -1.64
PHC3Q8NDX5 AC009237.10-201ENST00000414112 510 ntBASIC4.8□□□□□ -1.64
PHC3Q8NDX5 TBCAP2-201ENST00000416175 326 ntBASIC4.8□□□□□ -1.64
PHC3Q8NDX5 RPS15AP6-201ENST00000420703 385 ntBASIC4.8□□□□□ -1.64
PHC3Q8NDX5 CKS1BP6-201ENST00000424932 240 ntBASIC4.8□□□□□ -1.64
PHC3Q8NDX5 AL449043.1-202ENST00000427318 582 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
PHC3Q8NDX5 AL592045.1-201ENST00000429867 352 ntBASIC4.8□□□□□ -1.64
PHC3Q8NDX5 AC097713.2-201ENST00000430199 356 ntBASIC4.8□□□□□ -1.64
PHC3Q8NDX5 RPS27P18-201ENST00000431701 247 ntBASIC4.8□□□□□ -1.64
PHC3Q8NDX5 AC114814.3-201ENST00000449362 663 ntTSL 2 BASIC4.8□□□□□ -1.64
PHC3Q8NDX5 SNORD108-201ENST00000459332 71 ntBASIC4.8□□□□□ -1.64
PHC3Q8NDX5 LINC01210-201ENST00000465283 625 ntTSL 2 BASIC4.8□□□□□ -1.64
PHC3Q8NDX5 AC092994.1-201ENST00000498604 279 ntTSL 3 BASIC4.8□□□□□ -1.64
PHC3Q8NDX5 AC026780.2-201ENST00000503489 730 ntTSL 5 BASIC4.8□□□□□ -1.64
PHC3Q8NDX5 RNA5SP392-201ENST00000516905 112 ntBASIC4.8□□□□□ -1.64
PHC3Q8NDX5 AC087369.1-201ENST00000520775 996 ntBASIC4.8□□□□□ -1.64
PHC3Q8NDX5 CYCSP40-201ENST00000575927 294 ntBASIC4.8□□□□□ -1.64
PHC3Q8NDX5 MIR4680-201ENST00000580906 66 ntBASIC4.8□□□□□ -1.64
PHC3Q8NDX5 NUTF2P8-201ENST00000604593 363 ntBASIC4.8□□□□□ -1.64
PHC3Q8NDX5 RNU6-85P-201ENST00000605989 107 ntBASIC4.8□□□□□ -1.64
PHC3Q8NDX5 AC005344.1-201ENST00000613391 459 ntBASIC4.8□□□□□ -1.64
PHC3Q8NDX5 AL022401.1-201ENST00000619498 108 ntBASIC4.8□□□□□ -1.64
PHC3Q8NDX5 LDHA-225ENST00000625635 141 ntTSL 5 BASIC4.8□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 132.7 ms