Protein–RNA interactions for Protein: Q8N8U3

RTL3, Retrotransposon Gag-like protein 3, humanhuman

Known RBP Predictions only

Length 475 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTL3Q8N8U3 AC009812.2-201ENST00000517657 457 ntBASIC3.08□□□□□ -1.92
RTL3Q8N8U3 AC103957.1-202ENST00000519814 735 ntTSL 3 BASIC3.08□□□□□ -1.92
RTL3Q8N8U3 AP003718.1-201ENST00000529884 583 ntTSL 4 BASIC3.08□□□□□ -1.92
RTL3Q8N8U3 AC007954.1-201ENST00000554198 494 ntBASIC3.08□□□□□ -1.92
RTL3Q8N8U3 AC069029.1-201ENST00000558736 263 ntTSL 2 BASIC3.08□□□□□ -1.92
RTL3Q8N8U3 AC113146.1-202ENST00000560259 433 ntTSL 5 BASIC3.08□□□□□ -1.92
RTL3Q8N8U3 AC105129.3-201ENST00000605455 485 ntBASIC3.08□□□□□ -1.92
RTL3Q8N8U3 RNU6-88P-201ENST00000606801 100 ntBASIC3.08□□□□□ -1.92
RTL3Q8N8U3 HOTTIP_4.1-201ENST00000618195 165 ntBASIC3.08□□□□□ -1.92
RTL3Q8N8U3 AC068880.5-201ENST00000624331 290 ntBASIC3.08□□□□□ -1.92
RTL3Q8N8U3 EVI2B-202ENST00000577894 1597 ntAPPRIS P1 TSL 2 BASIC3.08□□□□□ -1.92
RTL3Q8N8U3 PMS1-215ENST00000447232 2576 ntTSL 2 BASIC3.07□□□□□ -1.92
RTL3Q8N8U3 MGAT4C-202ENST00000548651 2159 ntAPPRIS P1 TSL 5 BASIC3.07□□□□□ -1.92
RTL3Q8N8U3 RNU6-462P-201ENST00000362659 105 ntBASIC3.07□□□□□ -1.92
RTL3Q8N8U3 RNU6-223P-201ENST00000362830 107 ntBASIC3.07□□□□□ -1.92
RTL3Q8N8U3 Y_RNA.302-201ENST00000364997 102 ntBASIC3.07□□□□□ -1.92
RTL3Q8N8U3 CD80-202ENST00000383669 771 ntTSL 1 (best) BASIC3.07□□□□□ -1.92
RTL3Q8N8U3 RNU6-741P-201ENST00000383889 107 ntBASIC3.07□□□□□ -1.92
RTL3Q8N8U3 SNORD116-9-201ENST00000384000 95 ntBASIC3.07□□□□□ -1.92
RTL3Q8N8U3 SNORD116-3-201ENST00000384287 95 ntBASIC3.07□□□□□ -1.92
RTL3Q8N8U3 SNORD116-7-201ENST00000384404 95 ntBASIC3.07□□□□□ -1.92
RTL3Q8N8U3 SNORD116-5-201ENST00000384462 95 ntBASIC3.07□□□□□ -1.92
RTL3Q8N8U3 RNU6-754P-201ENST00000391166 107 ntBASIC3.07□□□□□ -1.92
RTL3Q8N8U3 NT5C3A-205ENST00000409467 1032 ntAPPRIS ALT1 TSL 5 BASIC3.07□□□□□ -1.92
RTL3Q8N8U3 MTCO1P17-201ENST00000411522 491 ntBASIC3.07□□□□□ -1.92
RTL3Q8N8U3 Z99497.1-201ENST00000421282 135 ntBASIC3.07□□□□□ -1.92
RTL3Q8N8U3 UBE2FP3-201ENST00000436366 524 ntBASIC3.07□□□□□ -1.92
RTL3Q8N8U3 UBE2D3P4-201ENST00000441973 436 ntBASIC3.07□□□□□ -1.92
RTL3Q8N8U3 AC118469.1-201ENST00000442943 488 ntBASIC3.07□□□□□ -1.92
RTL3Q8N8U3 CBWD4P-201ENST00000445695 655 ntBASIC3.07□□□□□ -1.92
RTL3Q8N8U3 AL078587.1-201ENST00000448580 542 ntTSL 5 BASIC3.07□□□□□ -1.92
RTL3Q8N8U3 RPL23AP35-201ENST00000451906 501 ntBASIC3.07□□□□□ -1.92
RTL3Q8N8U3 LINC00894-208ENST00000455777 284 ntTSL 2 BASIC3.07□□□□□ -1.92
RTL3Q8N8U3 AL135752.1-201ENST00000479477 471 ntBASIC3.07□□□□□ -1.92
RTL3Q8N8U3 AC109486.1-201ENST00000486833 374 ntBASIC3.07□□□□□ -1.92
RTL3Q8N8U3 RN7SL633P-201ENST00000488974 297 ntBASIC3.07□□□□□ -1.92
RTL3Q8N8U3 DSTNP2-201ENST00000504533 515 ntBASIC3.07□□□□□ -1.92
RTL3Q8N8U3 VCAN-AS1-201ENST00000512090 424 ntTSL 3 BASIC3.07□□□□□ -1.92
RTL3Q8N8U3 AC092436.2-201ENST00000515188 411 ntTSL 2 BASIC3.07□□□□□ -1.92
RTL3Q8N8U3 RNA5SP380-201ENST00000517190 98 ntBASIC3.07□□□□□ -1.92
RTL3Q8N8U3 AC022679.1-202ENST00000520251 376 ntTSL 3 BASIC3.07□□□□□ -1.92
RTL3Q8N8U3 AC087276.1-201ENST00000529659 480 ntBASIC3.07□□□□□ -1.92
RTL3Q8N8U3 AP002004.1-207ENST00000531371 526 ntTSL 1 (best) BASIC3.07□□□□□ -1.92
RTL3Q8N8U3 AC010175.1-201ENST00000538219 224 ntTSL 5 BASIC3.07□□□□□ -1.92
RTL3Q8N8U3 AL133271.1-201ENST00000538229 291 ntBASIC3.07□□□□□ -1.92
RTL3Q8N8U3 MGST1-215ENST00000540056 546 ntTSL 3 BASIC3.07□□□□□ -1.92
RTL3Q8N8U3 AC135279.1-201ENST00000543493 504 ntBASIC3.07□□□□□ -1.92
RTL3Q8N8U3 CACNA1C-AS4-201ENST00000544415 735 ntTSL 3 BASIC3.07□□□□□ -1.92
RTL3Q8N8U3 AKIRIN1P1-201ENST00000547384 544 ntBASIC3.07□□□□□ -1.92
RTL3Q8N8U3 H3F3AP1-201ENST00000559984 334 ntBASIC3.07□□□□□ -1.92
RTL3Q8N8U3 LINC01584-203ENST00000567231 646 ntTSL 5 BASIC3.07□□□□□ -1.92
RTL3Q8N8U3 RPL23AP78-201ENST00000599928 470 ntBASIC3.07□□□□□ -1.92
RTL3Q8N8U3 WISP1-OT1-201ENST00000602893 642 ntBASIC3.07□□□□□ -1.92
RTL3Q8N8U3 AL358072.1-201ENST00000604156 575 ntBASIC3.07□□□□□ -1.92
RTL3Q8N8U3 MIR4458HG-202ENST00000605918 1057 ntTSL 1 (best) BASIC3.07□□□□□ -1.92
RTL3Q8N8U3 AC245008.1-201ENST00000608123 476 ntBASIC3.07□□□□□ -1.92
RTL3Q8N8U3 NPPA-AS1_3.1-201ENST00000617059 108 ntBASIC3.07□□□□□ -1.92
RTL3Q8N8U3 AF246928.1-201ENST00000623768 87 ntBASIC3.07□□□□□ -1.92
RTL3Q8N8U3 AC110079.1-202ENST00000635213 138 ntBASIC3.07□□□□□ -1.92
RTL3Q8N8U3 AC215522.3-201ENST00000635602 354 ntTSL 5 BASIC3.07□□□□□ -1.92
RTL3Q8N8U3 TRAPPC13-204ENST00000438419 1437 ntAPPRIS P4 TSL 1 (best) BASIC3.07□□□□□ -1.92
RTL3Q8N8U3 AL353743.1-202ENST00000431724 1695 ntBASIC3.07□□□□□ -1.92
RTL3Q8N8U3 RPL21P132-201ENST00000331267 462 ntBASIC3.06□□□□□ -1.92
RTL3Q8N8U3 Y_RNA.18-201ENST00000362461 102 ntBASIC3.06□□□□□ -1.92
RTL3Q8N8U3 RNU1-105P-201ENST00000363470 161 ntBASIC3.06□□□□□ -1.92
RTL3Q8N8U3 RNU6-777P-201ENST00000364265 104 ntBASIC3.06□□□□□ -1.92
RTL3Q8N8U3 LINC00587-201ENST00000374801 590 ntTSL 1 (best) BASIC3.06□□□□□ -1.92
RTL3Q8N8U3 RNU6-253P-201ENST00000384730 105 ntBASIC3.06□□□□□ -1.92
RTL3Q8N8U3 RNA5SP354-201ENST00000391247 136 ntBASIC3.06□□□□□ -1.92
RTL3Q8N8U3 API5P2-201ENST00000397055 1498 ntBASIC3.06□□□□□ -1.92
RTL3Q8N8U3 TANK-204ENST00000403609 555 ntTSL 1 (best) BASIC3.06□□□□□ -1.92
RTL3Q8N8U3 AL021407.1-201ENST00000404531 386 ntBASIC3.06□□□□□ -1.92
RTL3Q8N8U3 SNORA11.1-201ENST00000408133 129 ntBASIC3.06□□□□□ -1.92
RTL3Q8N8U3 RPL7P8-201ENST00000411964 730 ntBASIC3.06□□□□□ -1.92
RTL3Q8N8U3 AL365277.2-201ENST00000415255 551 ntTSL 3 BASIC3.06□□□□□ -1.92
RTL3Q8N8U3 AC104653.1-201ENST00000420579 578 ntTSL 2 BASIC3.06□□□□□ -1.92
RTL3Q8N8U3 VN1R108P-201ENST00000431580 830 ntBASIC3.06□□□□□ -1.92
RTL3Q8N8U3 BMI1P1-201ENST00000445879 941 ntBASIC3.06□□□□□ -1.92
RTL3Q8N8U3 OR6C5P-201ENST00000452388 923 ntBASIC3.06□□□□□ -1.92
RTL3Q8N8U3 AC092422.1-201ENST00000455576 584 ntTSL 4 BASIC3.06□□□□□ -1.92
RTL3Q8N8U3 VSTM2A-OT1-201ENST00000456049 3031 ntTSL 1 (best) BASIC3.06□□□□□ -1.92
RTL3Q8N8U3 LINC02462-201ENST00000503009 430 ntTSL 5 BASIC3.06□□□□□ -1.92
RTL3Q8N8U3 LINC02500-201ENST00000512547 493 ntTSL 3 BASIC3.06□□□□□ -1.92
RTL3Q8N8U3 AC098868.1-201ENST00000512628 624 ntTSL 2 BASIC3.06□□□□□ -1.92
RTL3Q8N8U3 AC104211.1-202ENST00000521307 866 ntTSL 3 BASIC3.06□□□□□ -1.92
RTL3Q8N8U3 AP000790.2-201ENST00000534388 522 ntTSL 3 BASIC3.06□□□□□ -1.92
RTL3Q8N8U3 KLRF2-201ENST00000535540 731 ntAPPRIS P1 TSL 1 (best) BASIC3.06□□□□□ -1.92
RTL3Q8N8U3 LINC02384-205ENST00000539404 785 ntTSL 3 BASIC3.06□□□□□ -1.92
RTL3Q8N8U3 MAPK1-204ENST00000544786 951 ntTSL 1 (best) BASIC3.06□□□□□ -1.92
RTL3Q8N8U3 AC091534.1-202ENST00000549953 468 ntTSL 5 BASIC3.06□□□□□ -1.92
RTL3Q8N8U3 AC026462.2-201ENST00000565771 286 ntTSL 2 BASIC3.06□□□□□ -1.92
RTL3Q8N8U3 AC010547.2-201ENST00000568523 409 ntTSL 5 BASIC3.06□□□□□ -1.92
RTL3Q8N8U3 AC010680.1-201ENST00000590024 3590 ntBASIC3.06□□□□□ -1.92
RTL3Q8N8U3 AC004223.2-201ENST00000590309 544 ntBASIC3.06□□□□□ -1.92
RTL3Q8N8U3 AL162274.2-201ENST00000614406 332 ntBASIC3.06□□□□□ -1.92
RTL3Q8N8U3 MIR7844-201ENST00000616161 122 ntBASIC3.06□□□□□ -1.92
RTL3Q8N8U3 AC090617.7-201ENST00000623952 126 ntBASIC3.06□□□□□ -1.92
RTL3Q8N8U3 VPS8-228ENST00000628962 207 ntTSL 5 BASIC3.06□□□□□ -1.92
RTL3Q8N8U3 AC008505.1-205ENST00000637847 703 ntTSL 5 BASIC3.06□□□□□ -1.92
RTL3Q8N8U3 AC068137.4-201ENST00000638485 296 ntBASIC3.06□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 153.6 ms