Protein–RNA interactions for Protein: Q8N684

CPSF7, Cleavage and polyadenylation specificity factor subunit 7, humanhuman

Known RBP Predictions only

Length 471 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7Q8N684 RNU6-223P-201ENST00000362830 107 ntBASIC3.22□□□□□ -1.89
CPSF7Q8N684 Y_RNA.111-201ENST00000363248 100 ntBASIC3.22□□□□□ -1.89
CPSF7Q8N684 RNY4P16-201ENST00000364768 94 ntBASIC3.22□□□□□ -1.89
CPSF7Q8N684 RNY4P34-201ENST00000364779 95 ntBASIC3.22□□□□□ -1.89
CPSF7Q8N684 LGI1-201ENST00000371413 1247 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
CPSF7Q8N684 OR5H15-201ENST00000383696 930 ntBASIC3.22□□□□□ -1.89
CPSF7Q8N684 RNU6-76P-201ENST00000384060 104 ntBASIC3.22□□□□□ -1.89
CPSF7Q8N684 RNU6-248P-201ENST00000410720 107 ntBASIC3.22□□□□□ -1.89
CPSF7Q8N684 AL663109.1-201ENST00000411498 844 ntBASIC3.22□□□□□ -1.89
CPSF7Q8N684 UBE2FP1-201ENST00000416536 447 ntBASIC3.22□□□□□ -1.89
CPSF7Q8N684 PPP1R11P2-201ENST00000423543 382 ntBASIC3.22□□□□□ -1.89
CPSF7Q8N684 AL162414.1-201ENST00000426204 744 ntTSL 3 BASIC3.22□□□□□ -1.89
CPSF7Q8N684 AL589872.1-201ENST00000426602 288 ntBASIC3.22□□□□□ -1.89
CPSF7Q8N684 AL033539.1-201ENST00000427775 743 ntTSL 3 BASIC3.22□□□□□ -1.89
CPSF7Q8N684 DLGAP5P1-201ENST00000430307 464 ntBASIC3.22□□□□□ -1.89
CPSF7Q8N684 AL138830.1-201ENST00000435802 402 ntTSL 3 BASIC3.22□□□□□ -1.89
CPSF7Q8N684 CST9LP2-201ENST00000437612 320 ntBASIC3.22□□□□□ -1.89
CPSF7Q8N684 AC244505.5-201ENST00000443639 207 ntBASIC3.22□□□□□ -1.89
CPSF7Q8N684 GAPDHP27-201ENST00000447427 1020 ntBASIC3.22□□□□□ -1.89
CPSF7Q8N684 AC114485.1-201ENST00000447916 657 ntTSL 3 BASIC3.22□□□□□ -1.89
CPSF7Q8N684 AC115115.1-201ENST00000449927 248 ntBASIC3.22□□□□□ -1.89
CPSF7Q8N684 RBMY2UP-201ENST00000453474 324 ntBASIC3.22□□□□□ -1.89
CPSF7Q8N684 AL359095.1-201ENST00000457383 635 ntTSL 3 BASIC3.22□□□□□ -1.89
CPSF7Q8N684 AC092059.1-201ENST00000485347 429 ntTSL 3 BASIC3.22□□□□□ -1.89
CPSF7Q8N684 RPS15AP36-201ENST00000492022 382 ntBASIC3.22□□□□□ -1.89
CPSF7Q8N684 C4orf33-204ENST00000502887 1126 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
CPSF7Q8N684 AC091435.1-201ENST00000505442 584 ntBASIC3.22□□□□□ -1.89
CPSF7Q8N684 AC063919.1-201ENST00000514281 254 ntTSL 3 BASIC3.22□□□□□ -1.89
CPSF7Q8N684 AC106744.2-202ENST00000515123 448 ntTSL 3 BASIC3.22□□□□□ -1.89
CPSF7Q8N684 LINC02315-201ENST00000515218 696 ntTSL 5 BASIC3.22□□□□□ -1.89
CPSF7Q8N684 Y_RNA.672-201ENST00000516289 104 ntBASIC3.22□□□□□ -1.89
CPSF7Q8N684 SNORA31.8-201ENST00000516327 108 ntBASIC3.22□□□□□ -1.89
CPSF7Q8N684 RNU2-46P-201ENST00000517038 113 ntBASIC3.22□□□□□ -1.89
CPSF7Q8N684 AC107934.1-201ENST00000522215 217 ntBASIC3.22□□□□□ -1.89
CPSF7Q8N684 AC079584.2-201ENST00000548756 515 ntTSL 3 BASIC3.22□□□□□ -1.89
CPSF7Q8N684 PPFIA2-AS1-205ENST00000550938 790 ntTSL 3 BASIC3.22□□□□□ -1.89
CPSF7Q8N684 AC011611.1-201ENST00000552179 197 ntBASIC3.22□□□□□ -1.89
CPSF7Q8N684 NCAPGP2-201ENST00000557911 754 ntBASIC3.22□□□□□ -1.89
CPSF7Q8N684 MED28P6-201ENST00000558776 231 ntBASIC3.22□□□□□ -1.89
CPSF7Q8N684 AC099793.1-201ENST00000567538 285 ntTSL 3 BASIC3.22□□□□□ -1.89
CPSF7Q8N684 LINC01735-201ENST00000568112 279 ntTSL 3 BASIC3.22□□□□□ -1.89
CPSF7Q8N684 MIR3682-201ENST00000581338 84 ntBASIC3.22□□□□□ -1.89
CPSF7Q8N684 MIR4506-201ENST00000584693 77 ntBASIC3.22□□□□□ -1.89
CPSF7Q8N684 AL139286.2-201ENST00000606838 396 ntBASIC3.22□□□□□ -1.89
CPSF7Q8N684 AP000254.1-201ENST00000609934 520 ntBASIC3.22□□□□□ -1.89
CPSF7Q8N684 AC245517.5-201ENST00000611529 162 ntBASIC3.22□□□□□ -1.89
CPSF7Q8N684 UBE2Q2P2-203ENST00000613592 761 ntBASIC3.22□□□□□ -1.89
CPSF7Q8N684 AL356321.1-201ENST00000621360 228 ntBASIC3.22□□□□□ -1.89
CPSF7Q8N684 AC110994.2-201ENST00000635481 492 ntBASIC3.22□□□□□ -1.89
CPSF7Q8N684 FAM35CP-201ENST00000554755 2470 ntBASIC3.22□□□□□ -1.89
CPSF7Q8N684 PHF3-202ENST00000393387 6947 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
CPSF7Q8N684 ZNF883-201ENST00000619044 2051 ntAPPRIS P1 TSL 5 BASIC3.21□□□□□ -1.89
CPSF7Q8N684 ATXN3L-201ENST00000380622 2164 ntAPPRIS P1 BASIC3.21□□□□□ -1.9
CPSF7Q8N684 AGTR1-208ENST00000475347 1669 ntAPPRIS P1 TSL 3 BASIC3.21□□□□□ -1.9
CPSF7Q8N684 AC007256.1-201ENST00000392253 2765 ntBASIC3.21□□□□□ -1.9
CPSF7Q8N684 AC110774.1-201ENST00000623567 2018 ntBASIC3.21□□□□□ -1.9
CPSF7Q8N684 RNU1-33P-201ENST00000364249 162 ntBASIC3.21□□□□□ -1.9
CPSF7Q8N684 RNU6-1119P-201ENST00000384349 108 ntBASIC3.21□□□□□ -1.9
CPSF7Q8N684 AL109755.1-201ENST00000401791 649 ntBASIC3.21□□□□□ -1.9
CPSF7Q8N684 RNA5SP129-201ENST00000410276 118 ntBASIC3.21□□□□□ -1.9
CPSF7Q8N684 RPL32P35-201ENST00000415214 394 ntBASIC3.21□□□□□ -1.9
CPSF7Q8N684 AC104777.3-201ENST00000416350 545 ntTSL 3 BASIC3.21□□□□□ -1.9
CPSF7Q8N684 AL138775.1-201ENST00000429539 575 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
CPSF7Q8N684 AL589823.1-201ENST00000429577 183 ntBASIC3.21□□□□□ -1.9
CPSF7Q8N684 PCYT1B-AS1-201ENST00000432626 275 ntTSL 2 BASIC3.21□□□□□ -1.9
CPSF7Q8N684 AL031667.1-201ENST00000440222 725 ntBASIC3.21□□□□□ -1.9
CPSF7Q8N684 RPL26P6-201ENST00000440913 438 ntBASIC3.21□□□□□ -1.9
CPSF7Q8N684 ELOCP30-201ENST00000447108 299 ntBASIC3.21□□□□□ -1.9
CPSF7Q8N684 AL020994.3-201ENST00000449126 274 ntTSL 3 BASIC3.21□□□□□ -1.9
CPSF7Q8N684 AL162389.1-201ENST00000449233 177 ntBASIC3.21□□□□□ -1.9
CPSF7Q8N684 AL589678.1-201ENST00000452685 561 ntTSL 3 BASIC3.21□□□□□ -1.9
CPSF7Q8N684 BX510359.1-201ENST00000456973 237 ntBASIC3.21□□□□□ -1.9
CPSF7Q8N684 AC108751.4-201ENST00000462931 1001 ntTSL 2 BASIC3.21□□□□□ -1.9
CPSF7Q8N684 ANKRD36B-207ENST00000497329 649 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
CPSF7Q8N684 AC079349.1-201ENST00000509096 589 ntTSL 2 BASIC3.21□□□□□ -1.9
CPSF7Q8N684 SNORA18.6-201ENST00000516792 115 ntBASIC3.21□□□□□ -1.9
CPSF7Q8N684 SNORA31.22-201ENST00000517204 135 ntBASIC3.21□□□□□ -1.9
CPSF7Q8N684 AC104211.1-202ENST00000521307 866 ntTSL 3 BASIC3.21□□□□□ -1.9
CPSF7Q8N684 DEFB108A-201ENST00000530110 222 ntBASIC3.21□□□□□ -1.9
CPSF7Q8N684 AL358335.2-201ENST00000555693 487 ntTSL 3 BASIC3.21□□□□□ -1.9
CPSF7Q8N684 AC092718.6-202ENST00000563072 408 ntTSL 2 BASIC3.21□□□□□ -1.9
CPSF7Q8N684 MIR4528-201ENST00000577763 90 ntBASIC3.21□□□□□ -1.9
CPSF7Q8N684 AC011824.2-201ENST00000579896 579 ntTSL 4 BASIC3.21□□□□□ -1.9
CPSF7Q8N684 AC104534.1-201ENST00000594558 566 ntTSL 4 BASIC3.21□□□□□ -1.9
CPSF7Q8N684 AC090578.1-201ENST00000604955 591 ntBASIC3.21□□□□□ -1.9
CPSF7Q8N684 uc_338.1-201ENST00000612113 180 ntBASIC3.21□□□□□ -1.9
CPSF7Q8N684 TUG1_2.1-201ENST00000614234 87 ntBASIC3.21□□□□□ -1.9
CPSF7Q8N684 AL603758.1-201ENST00000618654 241 ntBASIC3.21□□□□□ -1.9
CPSF7Q8N684 AC095031.1-201ENST00000623685 672 ntBASIC3.21□□□□□ -1.9
CPSF7Q8N684 AC007218.2-201ENST00000636913 179 ntTSL 5 BASIC3.21□□□□□ -1.9
CPSF7Q8N684 DCUN1D1-201ENST00000292782 7954 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
CPSF7Q8N684 ZFYVE16-202ENST00000505560 6599 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
CPSF7Q8N684 AC093831.2-201ENST00000624393 3427 ntBASIC3.21□□□□□ -1.9
CPSF7Q8N684 TOP2A-201ENST00000423485 5758 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
CPSF7Q8N684 EVI2A-202ENST00000461237 1540 ntAPPRIS ALT2 TSL 4 BASIC3.2□□□□□ -1.9
CPSF7Q8N684 ANKRD36C-201ENST00000295246 2272 ntTSL 5 BASIC3.2□□□□□ -1.9
CPSF7Q8N684 RNU6-50P-201ENST00000362356 103 ntBASIC3.2□□□□□ -1.9
CPSF7Q8N684 U8.3-201ENST00000363321 132 ntBASIC3.2□□□□□ -1.9
CPSF7Q8N684 SNORA23-201ENST00000365128 182 ntBASIC3.2□□□□□ -1.9
CPSF7Q8N684 RNY3P13-201ENST00000365542 102 ntBASIC3.2□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 101.8 ms