Protein–RNA interactions for Protein: Q8N4M1

SLC44A3, Choline transporter-like protein 3, humanhuman

Predictions only

Length 653 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC44A3Q8N4M1 MSTN-201ENST00000260950 2822 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
SLC44A3Q8N4M1 DTWD1-201ENST00000251250 13776 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
SLC44A3Q8N4M1 OSBPL8-202ENST00000393249 7047 ntAPPRIS ALT1 TSL 1 (best) BASIC4.04□□□□□ -1.76
SLC44A3Q8N4M1 NLGN1-206ENST00000457714 8242 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
SLC44A3Q8N4M1 MTND5P3-201ENST00000438536 1800 ntBASIC4.04□□□□□ -1.76
SLC44A3Q8N4M1 TRMT10A-203ENST00000394877 3516 ntAPPRIS P1 TSL 2 BASIC4.04□□□□□ -1.76
SLC44A3Q8N4M1 NCOA1-202ENST00000348332 6895 ntAPPRIS P4 TSL 1 (best) BASIC4.04□□□□□ -1.76
SLC44A3Q8N4M1 LRRC39-204ENST00000620882 1951 ntTSL 5 BASIC4.03□□□□□ -1.76
SLC44A3Q8N4M1 SCN3A-209ENST00000639244 8854 ntTSL 5 BASIC4.03□□□□□ -1.76
SLC44A3Q8N4M1 THEMIS-202ENST00000368250 4101 ntAPPRIS P3 TSL 5 BASIC4.03□□□□□ -1.76
SLC44A3Q8N4M1 LINC01505-206ENST00000637046 4266 ntTSL 5 BASIC4.03□□□□□ -1.76
SLC44A3Q8N4M1 ZBTB8OS-201ENST00000341885 312 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
SLC44A3Q8N4M1 RNU6-552P-201ENST00000362869 119 ntBASIC4.03□□□□□ -1.76
SLC44A3Q8N4M1 SNORD42.2-201ENST00000365570 69 ntBASIC4.03□□□□□ -1.76
SLC44A3Q8N4M1 RNU6-38P-201ENST00000384085 107 ntBASIC4.03□□□□□ -1.76
SLC44A3Q8N4M1 U3.29-201ENST00000391296 212 ntBASIC4.03□□□□□ -1.76
SLC44A3Q8N4M1 LGALS16-201ENST00000392051 624 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
SLC44A3Q8N4M1 CD3D-202ENST00000392884 476 ntTSL 2 BASIC4.03□□□□□ -1.76
SLC44A3Q8N4M1 STAP1-202ENST00000396225 1146 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
SLC44A3Q8N4M1 RNA5SP39-201ENST00000411245 120 ntBASIC4.03□□□□□ -1.76
SLC44A3Q8N4M1 AL162394.1-201ENST00000413271 419 ntTSL 2 BASIC4.03□□□□□ -1.76
SLC44A3Q8N4M1 NAP1L1P2-201ENST00000414182 1089 ntBASIC4.03□□□□□ -1.76
SLC44A3Q8N4M1 HSPE1P1-201ENST00000421494 318 ntBASIC4.03□□□□□ -1.76
SLC44A3Q8N4M1 AC005062.1-206ENST00000424516 710 ntTSL 3 BASIC4.03□□□□□ -1.76
SLC44A3Q8N4M1 BX005214.1-201ENST00000427327 476 ntTSL 5 BASIC4.03□□□□□ -1.76
SLC44A3Q8N4M1 MED13P1-201ENST00000428342 171 ntBASIC4.03□□□□□ -1.76
SLC44A3Q8N4M1 NCOA7-AS1-201ENST00000429007 501 ntTSL 3 BASIC4.03□□□□□ -1.76
SLC44A3Q8N4M1 AC093581.1-202ENST00000430890 391 ntTSL 2 BASIC4.03□□□□□ -1.76
SLC44A3Q8N4M1 AC002386.1-201ENST00000436714 398 ntTSL 2 BASIC4.03□□□□□ -1.76
SLC44A3Q8N4M1 AL590999.1-206ENST00000437947 436 ntTSL 3 BASIC4.03□□□□□ -1.76
SLC44A3Q8N4M1 AL136097.2-201ENST00000457003 333 ntTSL 2 BASIC4.03□□□□□ -1.76
SLC44A3Q8N4M1 RNU6-333P-201ENST00000459117 107 ntBASIC4.03□□□□□ -1.76
SLC44A3Q8N4M1 RNU7-66P-201ENST00000459469 62 ntBASIC4.03□□□□□ -1.76
SLC44A3Q8N4M1 AC007547.1-201ENST00000462177 490 ntBASIC4.03□□□□□ -1.76
SLC44A3Q8N4M1 AC006512.1-201ENST00000468816 291 ntBASIC4.03□□□□□ -1.76
SLC44A3Q8N4M1 AC092436.1-201ENST00000506450 503 ntBASIC4.03□□□□□ -1.76
SLC44A3Q8N4M1 AC004062.1-201ENST00000509926 645 ntBASIC4.03□□□□□ -1.76
SLC44A3Q8N4M1 FAM206BP-201ENST00000510179 541 ntBASIC4.03□□□□□ -1.76
SLC44A3Q8N4M1 ABCA17P-206ENST00000512848 467 ntTSL 2 BASIC4.03□□□□□ -1.76
SLC44A3Q8N4M1 AC140847.1-201ENST00000538025 534 ntTSL 4 BASIC4.03□□□□□ -1.76
SLC44A3Q8N4M1 AL583810.3-201ENST00000555713 584 ntTSL 4 BASIC4.03□□□□□ -1.76
SLC44A3Q8N4M1 AL121821.2-201ENST00000556081 394 ntBASIC4.03□□□□□ -1.76
SLC44A3Q8N4M1 AC026464.5-201ENST00000562497 722 ntBASIC4.03□□□□□ -1.76
SLC44A3Q8N4M1 CYP4A43P-201ENST00000568156 121 ntBASIC4.03□□□□□ -1.76
SLC44A3Q8N4M1 AC005668.1-201ENST00000571142 476 ntBASIC4.03□□□□□ -1.76
SLC44A3Q8N4M1 STARD13-AS-221ENST00000608197 604 ntTSL 5 BASIC4.03□□□□□ -1.76
SLC44A3Q8N4M1 AL590491.2-201ENST00000614608 499 ntTSL 5 BASIC4.03□□□□□ -1.76
SLC44A3Q8N4M1 AC040168.1-201ENST00000623594 991 ntBASIC4.03□□□□□ -1.76
SLC44A3Q8N4M1 Z73965.1-201ENST00000623412 2297 ntBASIC4.03□□□□□ -1.76
SLC44A3Q8N4M1 SMC6-203ENST00000402989 3729 ntAPPRIS P1 TSL 2 BASIC4.03□□□□□ -1.76
SLC44A3Q8N4M1 SLC17A4-203ENST00000439485 3699 ntTSL 5 BASIC4.03□□□□□ -1.76
SLC44A3Q8N4M1 NT5C3A-202ENST00000381626 1909 ntAPPRIS ALT1 TSL 5 BASIC4.03□□□□□ -1.76
SLC44A3Q8N4M1 ENPP2-202ENST00000259486 3233 ntAPPRIS P3 TSL 1 (best) BASIC4.02□□□□□ -1.77
SLC44A3Q8N4M1 AK9-202ENST00000355283 2499 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
SLC44A3Q8N4M1 PICALM-209ENST00000528398 2049 ntTSL 2 BASIC4.02□□□□□ -1.77
SLC44A3Q8N4M1 SELENOI-201ENST00000260585 8101 ntAPPRIS P2 TSL 1 (best) BASIC4.02□□□□□ -1.77
SLC44A3Q8N4M1 HSPE1P11-201ENST00000339579 310 ntBASIC4.02□□□□□ -1.77
SLC44A3Q8N4M1 RNU1-15P-201ENST00000353977 144 ntBASIC4.02□□□□□ -1.77
SLC44A3Q8N4M1 Y_RNA.100-201ENST00000363141 102 ntBASIC4.02□□□□□ -1.77
SLC44A3Q8N4M1 U3.11-201ENST00000364476 212 ntBASIC4.02□□□□□ -1.77
SLC44A3Q8N4M1 LINC00587-201ENST00000374801 590 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
SLC44A3Q8N4M1 Y_RNA.387-201ENST00000383918 102 ntBASIC4.02□□□□□ -1.77
SLC44A3Q8N4M1 RNU6-738P-201ENST00000384531 106 ntBASIC4.02□□□□□ -1.77
SLC44A3Q8N4M1 RPL23AP48-201ENST00000406913 488 ntBASIC4.02□□□□□ -1.77
SLC44A3Q8N4M1 RPL31P2-201ENST00000413849 377 ntBASIC4.02□□□□□ -1.77
SLC44A3Q8N4M1 AC004552.1-201ENST00000419089 348 ntBASIC4.02□□□□□ -1.77
SLC44A3Q8N4M1 AC018630.2-202ENST00000422992 927 ntBASIC4.02□□□□□ -1.77
SLC44A3Q8N4M1 AL159987.2-201ENST00000432754 307 ntBASIC4.02□□□□□ -1.77
SLC44A3Q8N4M1 AL691515.1-201ENST00000432976 733 ntTSL 2 BASIC4.02□□□□□ -1.77
SLC44A3Q8N4M1 UBE2V1P13-201ENST00000436983 439 ntBASIC4.02□□□□□ -1.77
SLC44A3Q8N4M1 AC127537.2-201ENST00000439258 465 ntBASIC4.02□□□□□ -1.77
SLC44A3Q8N4M1 TRAPPC2P3-201ENST00000443200 321 ntBASIC4.02□□□□□ -1.77
SLC44A3Q8N4M1 AL139383.1-203ENST00000445227 420 ntTSL 3 BASIC4.02□□□□□ -1.77
SLC44A3Q8N4M1 RAC1P7-201ENST00000445367 377 ntBASIC4.02□□□□□ -1.77
SLC44A3Q8N4M1 AL590639.1-201ENST00000456484 337 ntBASIC4.02□□□□□ -1.77
SLC44A3Q8N4M1 Y_RNA.639-201ENST00000458981 102 ntBASIC4.02□□□□□ -1.77
SLC44A3Q8N4M1 RPS26P3-201ENST00000470205 348 ntBASIC4.02□□□□□ -1.77
SLC44A3Q8N4M1 MTND4P17-201ENST00000470444 350 ntBASIC4.02□□□□□ -1.77
SLC44A3Q8N4M1 WDR49-207ENST00000479765 2108 ntTSL 2 BASIC4.02□□□□□ -1.77
SLC44A3Q8N4M1 AC090543.2-201ENST00000483963 348 ntBASIC4.02□□□□□ -1.77
SLC44A3Q8N4M1 AC004057.1-201ENST00000485827 348 ntBASIC4.02□□□□□ -1.77
SLC44A3Q8N4M1 RPS15AP36-201ENST00000492022 382 ntBASIC4.02□□□□□ -1.77
SLC44A3Q8N4M1 AC092666.1-202ENST00000493400 442 ntTSL 2 BASIC4.02□□□□□ -1.77
SLC44A3Q8N4M1 AC093725.2-201ENST00000507808 356 ntTSL 2 BASIC4.02□□□□□ -1.77
SLC44A3Q8N4M1 AC091906.1-201ENST00000511310 391 ntTSL 2 BASIC4.02□□□□□ -1.77
SLC44A3Q8N4M1 AC113385.1-201ENST00000511468 563 ntTSL 4 BASIC4.02□□□□□ -1.77
SLC44A3Q8N4M1 RN7SKP256-201ENST00000517201 314 ntBASIC4.02□□□□□ -1.77
SLC44A3Q8N4M1 RPL7P20-201ENST00000520308 745 ntBASIC4.02□□□□□ -1.77
SLC44A3Q8N4M1 AC026765.1-201ENST00000547876 435 ntTSL 3 BASIC4.02□□□□□ -1.77
SLC44A3Q8N4M1 MEG8-215ENST00000555354 469 ntTSL 3 BASIC4.02□□□□□ -1.77
SLC44A3Q8N4M1 AC012186.2-201ENST00000569353 321 ntTSL 3 BASIC4.02□□□□□ -1.77
SLC44A3Q8N4M1 AC007151.1-201ENST00000572774 483 ntBASIC4.02□□□□□ -1.77
SLC44A3Q8N4M1 MIR4775-201ENST00000581168 75 ntBASIC4.02□□□□□ -1.77
SLC44A3Q8N4M1 MIR5187-201ENST00000583479 76 ntBASIC4.02□□□□□ -1.77
SLC44A3Q8N4M1 AC016866.2-201ENST00000585251 502 ntTSL 2 BASIC4.02□□□□□ -1.77
SLC44A3Q8N4M1 AC090409.2-202ENST00000585706 604 ntTSL 5 BASIC4.02□□□□□ -1.77
SLC44A3Q8N4M1 AC002115.1-201ENST00000589603 568 ntTSL 4 BASIC4.02□□□□□ -1.77
SLC44A3Q8N4M1 AP000942.4-201ENST00000604811 241 ntBASIC4.02□□□□□ -1.77
SLC44A3Q8N4M1 AC103710.3-201ENST00000608157 948 ntBASIC4.02□□□□□ -1.77
SLC44A3Q8N4M1 UBE2E2-206ENST00000613545 282 ntTSL 5 BASIC4.02□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 168.6 ms