Protein–RNA interactions for Protein: Q8N3V7

SYNPO, Synaptopodin, humanhuman

Predictions only

Length 929 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPOQ8N3V7 LINC00411-201ENST00000436722 461 ntTSL 3 BASIC4.41□□□□□ -1.7
SYNPOQ8N3V7 AP000852.1-201ENST00000472460 573 ntBASIC4.41□□□□□ -1.7
SYNPOQ8N3V7 AC104164.2-201ENST00000496953 495 ntBASIC4.41□□□□□ -1.7
SYNPOQ8N3V7 ENSA-210ENST00000503241 574 ntTSL 3 BASIC4.41□□□□□ -1.7
SYNPOQ8N3V7 RNA5SP446-201ENST00000515955 82 ntBASIC4.41□□□□□ -1.7
SYNPOQ8N3V7 Y_RNA.665-201ENST00000516177 98 ntBASIC4.41□□□□□ -1.7
SYNPOQ8N3V7 RNA5SP73-201ENST00000516744 108 ntBASIC4.41□□□□□ -1.7
SYNPOQ8N3V7 IL7-206ENST00000520269 456 ntTSL 3 BASIC4.41□□□□□ -1.7
SYNPOQ8N3V7 AC091178.1-203ENST00000584586 279 ntBASIC4.41□□□□□ -1.7
SYNPOQ8N3V7 AC091135.1-201ENST00000585943 307 ntBASIC4.41□□□□□ -1.7
SYNPOQ8N3V7 AC007687.1-201ENST00000602704 304 ntBASIC4.41□□□□□ -1.7
SYNPOQ8N3V7 ATP1B3P1-201ENST00000605365 821 ntBASIC4.41□□□□□ -1.7
SYNPOQ8N3V7 AL021997.2-201ENST00000615674 271 ntBASIC4.41□□□□□ -1.7
SYNPOQ8N3V7 AC007546.1-201ENST00000619452 559 ntBASIC4.41□□□□□ -1.7
SYNPOQ8N3V7 MIR6075-201ENST00000620782 95 ntBASIC4.41□□□□□ -1.7
SYNPOQ8N3V7 AP003400.5-201ENST00000624827 617 ntBASIC4.41□□□□□ -1.7
SYNPOQ8N3V7 C1orf112-203ENST00000413811 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC4.41□□□□□ -1.7
SYNPOQ8N3V7 STAG2-204ENST00000371157 5991 ntAPPRIS P3 TSL 1 (best) BASIC4.41□□□□□ -1.7
SYNPOQ8N3V7 PANK1-203ENST00000342512 2703 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
SYNPOQ8N3V7 GHR-213ENST00000622294 4312 ntTSL 5 BASIC4.41□□□□□ -1.7
SYNPOQ8N3V7 ZNF85-201ENST00000300540 1531 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
SYNPOQ8N3V7 ANKRD20A10P-201ENST00000457591 1515 ntBASIC4.41□□□□□ -1.7
SYNPOQ8N3V7 RAG2-209ENST00000618712 2818 ntAPPRIS P1 TSL 4 BASIC4.4□□□□□ -1.7
SYNPOQ8N3V7 MAPK10-303ENST00000641324 3959 ntBASIC4.4□□□□□ -1.7
SYNPOQ8N3V7 ADGRL3-203ENST00000506700 4838 ntTSL 5 BASIC4.4□□□□□ -1.7
SYNPOQ8N3V7 FAP-214ENST00000627638 2569 ntAPPRIS ALT1 TSL 5 BASIC4.4□□□□□ -1.7
SYNPOQ8N3V7 NCK1-204ENST00000469404 2403 ntTSL 2 BASIC4.4□□□□□ -1.7
SYNPOQ8N3V7 CTNNA3-203ENST00000433211 10675 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
SYNPOQ8N3V7 RNU6-845P-201ENST00000362578 103 ntBASIC4.4□□□□□ -1.71
SYNPOQ8N3V7 Y_RNA.356-201ENST00000365475 113 ntBASIC4.4□□□□□ -1.71
SYNPOQ8N3V7 SNORA4.3-201ENST00000365564 137 ntBASIC4.4□□□□□ -1.71
SYNPOQ8N3V7 DEFB110-201ENST00000371148 384 ntAPPRIS P3 TSL 1 (best) BASIC4.4□□□□□ -1.71
SYNPOQ8N3V7 PARD3-204ENST00000374768 799 ntTSL 3 BASIC4.4□□□□□ -1.71
SYNPOQ8N3V7 RNU6-510P-201ENST00000391239 108 ntBASIC4.4□□□□□ -1.71
SYNPOQ8N3V7 CCDC126-203ENST00000410069 890 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
SYNPOQ8N3V7 NDUFB4P5-201ENST00000415445 361 ntBASIC4.4□□□□□ -1.71
SYNPOQ8N3V7 AC063979.1-201ENST00000415539 377 ntBASIC4.4□□□□□ -1.71
SYNPOQ8N3V7 RPL21P90-201ENST00000415692 466 ntBASIC4.4□□□□□ -1.71
SYNPOQ8N3V7 RPL23AP25-201ENST00000430973 463 ntBASIC4.4□□□□□ -1.71
SYNPOQ8N3V7 AL591704.1-201ENST00000432574 275 ntBASIC4.4□□□□□ -1.71
SYNPOQ8N3V7 HMGB1P12-201ENST00000438594 598 ntBASIC4.4□□□□□ -1.71
SYNPOQ8N3V7 AL137789.1-201ENST00000439443 682 ntTSL 3 BASIC4.4□□□□□ -1.71
SYNPOQ8N3V7 AL162151.2-201ENST00000448875 158 ntBASIC4.4□□□□□ -1.71
SYNPOQ8N3V7 AC106892.1-201ENST00000491608 406 ntTSL 3 BASIC4.4□□□□□ -1.71
SYNPOQ8N3V7 AC096711.2-201ENST00000510592 454 ntTSL 5 BASIC4.4□□□□□ -1.71
SYNPOQ8N3V7 RNU6-273P-201ENST00000516937 96 ntBASIC4.4□□□□□ -1.71
SYNPOQ8N3V7 AC023632.4-201ENST00000517783 191 ntBASIC4.4□□□□□ -1.71
SYNPOQ8N3V7 AC011933.3-201ENST00000578226 372 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
SYNPOQ8N3V7 AC103987.2-201ENST00000583436 417 ntTSL 2 BASIC4.4□□□□□ -1.71
SYNPOQ8N3V7 AC010928.1-202ENST00000589354 473 ntTSL 3 BASIC4.4□□□□□ -1.71
SYNPOQ8N3V7 AC079610.3-201ENST00000606960 147 ntTSL 3 BASIC4.4□□□□□ -1.71
SYNPOQ8N3V7 AC099654.5-201ENST00000636479 350 ntBASIC4.4□□□□□ -1.71
SYNPOQ8N3V7 ZNF345-216ENST00000640438 963 ntTSL 5 BASIC4.4□□□□□ -1.71
SYNPOQ8N3V7 PLEKHG7-203ENST00000638590 3267 ntAPPRIS P1 TSL 2 BASIC4.4□□□□□ -1.71
SYNPOQ8N3V7 OR6P1-202ENST00000641540 3255 ntAPPRIS P1 BASIC4.4□□□□□ -1.71
SYNPOQ8N3V7 UBE2D3-233ENST00000618836 3472 ntAPPRIS ALT1 TSL 5 BASIC4.4□□□□□ -1.71
SYNPOQ8N3V7 EMSY-207ENST00000525919 4074 ntAPPRIS ALT1 TSL 1 (best) BASIC4.4□□□□□ -1.71
SYNPOQ8N3V7 C2orf16-202ENST00000447166 16401 ntAPPRIS ALT2 TSL 3 BASIC4.4□□□□□ -1.71
SYNPOQ8N3V7 KCNJ6-201ENST00000609713 19645 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
SYNPOQ8N3V7 ZRANB3-201ENST00000264159 4046 ntAPPRIS P3 TSL 1 (best) BASIC4.4□□□□□ -1.71
SYNPOQ8N3V7 AF117829.1-206ENST00000621883 3802 ntBASIC4.4□□□□□ -1.71
SYNPOQ8N3V7 AC027290.2-201ENST00000623210 18662 ntBASIC4.4□□□□□ -1.71
SYNPOQ8N3V7 OR9H1P-201ENST00000446393 4888 ntAPPRIS P1 BASIC4.39□□□□□ -1.71
SYNPOQ8N3V7 ETV1-203ENST00000403527 3363 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
SYNPOQ8N3V7 ADGRL2-203ENST00000370713 5382 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
SYNPOQ8N3V7 PPP1R9A-205ENST00000424654 4058 ntTSL 5 BASIC4.39□□□□□ -1.71
SYNPOQ8N3V7 LRRC39-201ENST00000342895 1881 ntAPPRIS P1 TSL 5 BASIC4.39□□□□□ -1.71
SYNPOQ8N3V7 DCDC1-211ENST00000597505 5352 ntAPPRIS ALT2 TSL 5 BASIC4.39□□□□□ -1.71
SYNPOQ8N3V7 RNU6-1252P-201ENST00000363054 104 ntBASIC4.39□□□□□ -1.71
SYNPOQ8N3V7 RNA5SP171-201ENST00000391071 115 ntBASIC4.39□□□□□ -1.71
SYNPOQ8N3V7 OFD1P1Y-201ENST00000411756 1225 ntBASIC4.39□□□□□ -1.71
SYNPOQ8N3V7 POLHP1-201ENST00000411806 470 ntBASIC4.39□□□□□ -1.71
SYNPOQ8N3V7 AL353678.1-201ENST00000422735 741 ntBASIC4.39□□□□□ -1.71
SYNPOQ8N3V7 RPL7P2-201ENST00000427639 268 ntBASIC4.39□□□□□ -1.71
SYNPOQ8N3V7 COX6B1P7-201ENST00000430845 235 ntBASIC4.39□□□□□ -1.71
SYNPOQ8N3V7 AC007389.2-201ENST00000434630 306 ntBASIC4.39□□□□□ -1.71
SYNPOQ8N3V7 TAAR7P-201ENST00000436141 242 ntBASIC4.39□□□□□ -1.71
SYNPOQ8N3V7 AC092755.1-201ENST00000441746 97 ntTSL 3 BASIC4.39□□□□□ -1.71
SYNPOQ8N3V7 PRPS1P1-201ENST00000445305 876 ntBASIC4.39□□□□□ -1.71
SYNPOQ8N3V7 RPL23AP81-201ENST00000455252 467 ntBASIC4.39□□□□□ -1.71
SYNPOQ8N3V7 RNU6-1208P-201ENST00000459588 107 ntBASIC4.39□□□□□ -1.71
SYNPOQ8N3V7 RPL9P32-201ENST00000464118 620 ntBASIC4.39□□□□□ -1.71
SYNPOQ8N3V7 RN7SL542P-201ENST00000467147 294 ntBASIC4.39□□□□□ -1.71
SYNPOQ8N3V7 RPL23AP65-201ENST00000475608 468 ntBASIC4.39□□□□□ -1.71
SYNPOQ8N3V7 Y_RNA.654-201ENST00000497848 106 ntBASIC4.39□□□□□ -1.71
SYNPOQ8N3V7 RNU4-49P-201ENST00000516080 140 ntBASIC4.39□□□□□ -1.71
SYNPOQ8N3V7 RNA5SP309-201ENST00000516670 106 ntBASIC4.39□□□□□ -1.71
SYNPOQ8N3V7 LYRM2-203ENST00000520318 677 ntTSL 2 BASIC4.39□□□□□ -1.71
SYNPOQ8N3V7 UTP23-205ENST00000520733 369 ntTSL 3 BASIC4.39□□□□□ -1.71
SYNPOQ8N3V7 IGKV2D-19-201ENST00000523346 262 ntBASIC4.39□□□□□ -1.71
SYNPOQ8N3V7 NDUFB1-204ENST00000555441 458 ntAPPRIS P1 TSL 3 BASIC4.39□□□□□ -1.71
SYNPOQ8N3V7 AC243960.4-201ENST00000600532 288 ntBASIC4.39□□□□□ -1.71
SYNPOQ8N3V7 RPL7P50-201ENST00000600588 727 ntBASIC4.39□□□□□ -1.71
SYNPOQ8N3V7 Z82243.1-201ENST00000609432 473 ntBASIC4.39□□□□□ -1.71
SYNPOQ8N3V7 C2orf91-203ENST00000615044 393 ntAPPRIS ALT2 TSL 5 BASIC4.39□□□□□ -1.71
SYNPOQ8N3V7 AC104985.2-201ENST00000620598 500 ntBASIC4.39□□□□□ -1.71
SYNPOQ8N3V7 STON1-GTF2A1L-201ENST00000394751 3534 ntTSL 2 BASIC4.39□□□□□ -1.71
SYNPOQ8N3V7 MTND4P29-201ENST00000503122 1372 ntBASIC4.39□□□□□ -1.71
SYNPOQ8N3V7 NFIB-210ENST00000543693 7622 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
SYNPOQ8N3V7 RAP1B-201ENST00000250559 13438 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 138.6 ms