Protein–RNA interactions for Protein: Q8N2C3

DEPDC4, DEP domain-containing protein 4, humanhuman

Predictions only

Length 294 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC4Q8N2C3 AC074255.1-201ENST00000511259 501 ntBASIC5.19□□□□□ -1.58
DEPDC4Q8N2C3 RNU7-175P-201ENST00000515915 61 ntBASIC5.19□□□□□ -1.58
DEPDC4Q8N2C3 RNA5SP438-201ENST00000516561 112 ntBASIC5.19□□□□□ -1.58
DEPDC4Q8N2C3 IGKV2-23-201ENST00000518729 323 ntBASIC5.19□□□□□ -1.58
DEPDC4Q8N2C3 AC134511.1-201ENST00000535721 192 ntTSL 3 BASIC5.19□□□□□ -1.58
DEPDC4Q8N2C3 SNHG1-218ENST00000541615 748 ntTSL 5 BASIC5.19□□□□□ -1.58
DEPDC4Q8N2C3 RRN3P3-201ENST00000549207 578 ntBASIC5.19□□□□□ -1.58
DEPDC4Q8N2C3 HMGB1P14-201ENST00000557424 591 ntBASIC5.19□□□□□ -1.58
DEPDC4Q8N2C3 TRAV28-201ENST00000557548 323 ntBASIC5.19□□□□□ -1.58
DEPDC4Q8N2C3 RPL23AP78-201ENST00000599928 470 ntBASIC5.19□□□□□ -1.58
DEPDC4Q8N2C3 AL512624.1-201ENST00000613638 469 ntBASIC5.19□□□□□ -1.58
DEPDC4Q8N2C3 SMNDC1-202ENST00000369603 4341 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
DEPDC4Q8N2C3 RBMY1F-201ENST00000303766 1887 ntAPPRIS P5 TSL 1 (best) BASIC5.19□□□□□ -1.58
DEPDC4Q8N2C3 NFIB-211ENST00000606230 2311 ntTSL 5 BASIC5.19□□□□□ -1.58
DEPDC4Q8N2C3 SAMD12-202ENST00000409003 8866 ntAPPRIS P1 TSL 5 BASIC5.19□□□□□ -1.58
DEPDC4Q8N2C3 AL445623.2-201ENST00000640307 4805 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
DEPDC4Q8N2C3 ZNF117-201ENST00000282869 9080 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
DEPDC4Q8N2C3 AC006145.1-201ENST00000439234 2651 ntTSL 2 BASIC5.19□□□□□ -1.58
DEPDC4Q8N2C3 MS4A14-201ENST00000300187 2997 ntAPPRIS P3 TSL 1 (best) BASIC5.19□□□□□ -1.58
DEPDC4Q8N2C3 AGBL2-201ENST00000357610 3295 ntAPPRIS ALT2 TSL 5 BASIC5.19□□□□□ -1.58
DEPDC4Q8N2C3 AC104623.2-202ENST00000623477 4002 ntBASIC5.19□□□□□ -1.58
DEPDC4Q8N2C3 NPSR1-AS1-202ENST00000419766 4821 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
DEPDC4Q8N2C3 RLIMP1-201ENST00000339626 1680 ntBASIC5.18□□□□□ -1.58
DEPDC4Q8N2C3 A2MP1-204ENST00000566278 4130 ntBASIC5.18□□□□□ -1.58
DEPDC4Q8N2C3 ZBTB38-220ENST00000514251 7683 ntAPPRIS P1 TSL 2 BASIC5.18□□□□□ -1.58
DEPDC4Q8N2C3 GYS2-201ENST00000261195 3132 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
DEPDC4Q8N2C3 FYB1-201ENST00000351578 4750 ntAPPRIS P3 TSL 1 (best) BASIC5.18□□□□□ -1.58
DEPDC4Q8N2C3 APCS-201ENST00000255040 926 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
DEPDC4Q8N2C3 WFDC11-202ENST00000356562 642 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
DEPDC4Q8N2C3 MT-ND1-201ENST00000361390 956 ntAPPRIS P1 BASIC5.18□□□□□ -1.58
DEPDC4Q8N2C3 RNA5SP273-201ENST00000362484 113 ntBASIC5.18□□□□□ -1.58
DEPDC4Q8N2C3 RNY1-201ENST00000364228 113 ntBASIC5.18□□□□□ -1.58
DEPDC4Q8N2C3 Y_RNA.352-201ENST00000365439 102 ntBASIC5.18□□□□□ -1.58
DEPDC4Q8N2C3 Y_RNA.439-201ENST00000384119 94 ntBASIC5.18□□□□□ -1.58
DEPDC4Q8N2C3 Y_RNA.555-201ENST00000384673 110 ntBASIC5.18□□□□□ -1.58
DEPDC4Q8N2C3 MRPL35P1-201ENST00000404272 572 ntBASIC5.18□□□□□ -1.58
DEPDC4Q8N2C3 AC114803.1-201ENST00000417355 311 ntTSL 3 BASIC5.18□□□□□ -1.58
DEPDC4Q8N2C3 MTND6P12-201ENST00000428247 522 ntBASIC5.18□□□□□ -1.58
DEPDC4Q8N2C3 MTND2P29-201ENST00000438595 412 ntBASIC5.18□□□□□ -1.58
DEPDC4Q8N2C3 GAS5-218ENST00000448718 565 ntTSL 2 BASIC5.18□□□□□ -1.58
DEPDC4Q8N2C3 AL445665.1-202ENST00000452436 324 ntBASIC5.18□□□□□ -1.58
DEPDC4Q8N2C3 AL354824.2-201ENST00000458004 446 ntTSL 3 BASIC5.18□□□□□ -1.58
DEPDC4Q8N2C3 AC007998.1-201ENST00000474156 672 ntBASIC5.18□□□□□ -1.58
DEPDC4Q8N2C3 DUTP1-201ENST00000493631 470 ntBASIC5.18□□□□□ -1.58
DEPDC4Q8N2C3 BTBD11-206ENST00000494235 811 ntTSL 2 BASIC5.18□□□□□ -1.58
DEPDC4Q8N2C3 GZMAP1-201ENST00000503054 631 ntBASIC5.18□□□□□ -1.58
DEPDC4Q8N2C3 AC098976.1-201ENST00000513014 541 ntBASIC5.18□□□□□ -1.58
DEPDC4Q8N2C3 AC010265.1-201ENST00000513509 211 ntBASIC5.18□□□□□ -1.58
DEPDC4Q8N2C3 AL671862.1-201ENST00000515851 349 ntBASIC5.18□□□□□ -1.58
DEPDC4Q8N2C3 RNU6-572P-201ENST00000516724 80 ntBASIC5.18□□□□□ -1.58
DEPDC4Q8N2C3 Y_RNA.706-201ENST00000516933 99 ntBASIC5.18□□□□□ -1.58
DEPDC4Q8N2C3 RNA5SP165-201ENST00000517142 115 ntBASIC5.18□□□□□ -1.58
DEPDC4Q8N2C3 RN7SKP92-201ENST00000517266 244 ntBASIC5.18□□□□□ -1.58
DEPDC4Q8N2C3 AP000873.2-204ENST00000530825 375 ntTSL 3 BASIC5.18□□□□□ -1.58
DEPDC4Q8N2C3 AP002770.2-201ENST00000543613 532 ntBASIC5.18□□□□□ -1.58
DEPDC4Q8N2C3 AC026116.1-201ENST00000551729 474 ntTSL 3 BASIC5.18□□□□□ -1.58
DEPDC4Q8N2C3 AC008149.1-201ENST00000551844 525 ntTSL 4 BASIC5.18□□□□□ -1.58
DEPDC4Q8N2C3 AC008794.2-201ENST00000587779 293 ntTSL 2 BASIC5.18□□□□□ -1.58
DEPDC4Q8N2C3 5S_rRNA.28-201ENST00000638107 119 ntBASIC5.18□□□□□ -1.58
DEPDC4Q8N2C3 PIGK-203ENST00000445065 4318 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
DEPDC4Q8N2C3 RASSF6-204ENST00000395777 2735 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
DEPDC4Q8N2C3 ADGB-205ENST00000397944 5325 ntAPPRIS P5 TSL 5 BASIC5.18□□□□□ -1.58
DEPDC4Q8N2C3 ZNF420-202ENST00000337995 3535 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
DEPDC4Q8N2C3 PANK1-202ENST00000322191 2513 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
DEPDC4Q8N2C3 AC006206.1-201ENST00000544842 3387 ntBASIC5.18□□□□□ -1.58
DEPDC4Q8N2C3 DNAH14-208ENST00000430092 13763 ntAPPRIS P1 TSL 5 BASIC5.17□□□□□ -1.58
DEPDC4Q8N2C3 ADGRL2-205ENST00000370717 5873 ntAPPRIS ALT2 TSL 5 BASIC5.17□□□□□ -1.58
DEPDC4Q8N2C3 ZNF525-202ENST00000474037 3890 ntAPPRIS P1 TSL 5 BASIC5.17□□□□□ -1.58
DEPDC4Q8N2C3 AC008568.2-201ENST00000623862 2313 ntBASIC5.17□□□□□ -1.58
DEPDC4Q8N2C3 AC104964.3-201ENST00000606115 2860 ntBASIC5.17□□□□□ -1.58
DEPDC4Q8N2C3 CTAGE5-208ENST00000553352 3441 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
DEPDC4Q8N2C3 MFAP1-201ENST00000267812 2155 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
DEPDC4Q8N2C3 AC008691.1-207ENST00000636819 4154 ntTSL 5 BASIC5.17□□□□□ -1.58
DEPDC4Q8N2C3 AL391987.6-201ENST00000305671 199 ntBASIC5.17□□□□□ -1.58
DEPDC4Q8N2C3 RN7SKP95-201ENST00000362860 303 ntBASIC5.17□□□□□ -1.58
DEPDC4Q8N2C3 RNU6-428P-201ENST00000362942 107 ntBASIC5.17□□□□□ -1.58
DEPDC4Q8N2C3 RNA5SP326-201ENST00000363209 110 ntBASIC5.17□□□□□ -1.58
DEPDC4Q8N2C3 RNA5SP284-201ENST00000384547 118 ntBASIC5.17□□□□□ -1.58
DEPDC4Q8N2C3 MIR130A-201ENST00000385274 89 ntBASIC5.17□□□□□ -1.58
DEPDC4Q8N2C3 RNA5SP241-201ENST00000391326 114 ntBASIC5.17□□□□□ -1.58
DEPDC4Q8N2C3 MIR1203-201ENST00000408812 85 ntBASIC5.17□□□□□ -1.58
DEPDC4Q8N2C3 MTCO3P29-201ENST00000432119 779 ntBASIC5.17□□□□□ -1.58
DEPDC4Q8N2C3 GAPDHP48-201ENST00000436626 961 ntBASIC5.17□□□□□ -1.58
DEPDC4Q8N2C3 PIGFP3-201ENST00000441918 722 ntBASIC5.17□□□□□ -1.58
DEPDC4Q8N2C3 AC005532.2-201ENST00000467154 373 ntBASIC5.17□□□□□ -1.58
DEPDC4Q8N2C3 KC877373.1-201ENST00000479066 408 ntBASIC5.17□□□□□ -1.58
DEPDC4Q8N2C3 Metazoa_SRP.158-201ENST00000487171 294 ntBASIC5.17□□□□□ -1.58
DEPDC4Q8N2C3 MRPS33-209ENST00000496958 688 ntAPPRIS P1 TSL 3 BASIC5.17□□□□□ -1.58
DEPDC4Q8N2C3 SSX6-203ENST00000509958 336 ntTSL 3 BASIC5.17□□□□□ -1.58
DEPDC4Q8N2C3 SNORD46.2-201ENST00000516021 102 ntBASIC5.17□□□□□ -1.58
DEPDC4Q8N2C3 RNU6-513P-201ENST00000516104 104 ntBASIC5.17□□□□□ -1.58
DEPDC4Q8N2C3 SNORA70.16-201ENST00000516390 95 ntBASIC5.17□□□□□ -1.58
DEPDC4Q8N2C3 AP003400.1-201ENST00000528319 231 ntTSL 5 BASIC5.17□□□□□ -1.58
DEPDC4Q8N2C3 AP000648.1-201ENST00000529682 397 ntBASIC5.17□□□□□ -1.58
DEPDC4Q8N2C3 AC093023.1-201ENST00000547375 507 ntBASIC5.17□□□□□ -1.58
DEPDC4Q8N2C3 MIR4260-201ENST00000583107 67 ntBASIC5.17□□□□□ -1.58
DEPDC4Q8N2C3 MIR6798-201ENST00000612887 67 ntBASIC5.17□□□□□ -1.58
DEPDC4Q8N2C3 MIR6826-201ENST00000617808 98 ntBASIC5.17□□□□□ -1.58
DEPDC4Q8N2C3 uc_338.7-201ENST00000621834 124 ntBASIC5.17□□□□□ -1.58
DEPDC4Q8N2C3 AC099506.2-201ENST00000623074 221 ntBASIC5.17□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 140.7 ms