Protein–RNA interactions for Protein: Q8N1B4

VPS52, Vacuolar protein sorting-associated protein 52 homolog, humanhuman

Predictions only

Length 723 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52Q8N1B4 OR5J1P-201ENST00000313544 939 ntBASIC3.77□□□□□ -1.81
VPS52Q8N1B4 RNU6-283P-201ENST00000364788 107 ntBASIC3.77□□□□□ -1.81
VPS52Q8N1B4 CRLS1-202ENST00000378868 994 ntTSL 5 BASIC3.77□□□□□ -1.81
VPS52Q8N1B4 RNU6-517P-201ENST00000384362 110 ntBASIC3.77□□□□□ -1.81
VPS52Q8N1B4 MIR634-201ENST00000385208 97 ntBASIC3.77□□□□□ -1.81
VPS52Q8N1B4 AL365356.1-201ENST00000411512 736 ntTSL 3 BASIC3.77□□□□□ -1.81
VPS52Q8N1B4 BX323014.1-201ENST00000412876 237 ntBASIC3.77□□□□□ -1.81
VPS52Q8N1B4 UBE2V1P10-201ENST00000414685 269 ntBASIC3.77□□□□□ -1.81
VPS52Q8N1B4 TOMM22P1-201ENST00000418578 312 ntBASIC3.77□□□□□ -1.81
VPS52Q8N1B4 LINC01780-201ENST00000420059 442 ntTSL 2 BASIC3.77□□□□□ -1.81
VPS52Q8N1B4 AL357375.1-201ENST00000424274 525 ntTSL 3 BASIC3.77□□□□□ -1.81
VPS52Q8N1B4 AC019097.1-201ENST00000424783 735 ntBASIC3.77□□□□□ -1.81
VPS52Q8N1B4 AC245052.1-201ENST00000426213 410 ntTSL 3 BASIC3.77□□□□□ -1.81
VPS52Q8N1B4 AC006989.1-201ENST00000427212 131 ntBASIC3.77□□□□□ -1.81
VPS52Q8N1B4 PCDH9-AS1-201ENST00000430861 532 ntTSL 2 BASIC3.77□□□□□ -1.81
VPS52Q8N1B4 AC005019.2-201ENST00000434321 359 ntTSL 5 BASIC3.77□□□□□ -1.81
VPS52Q8N1B4 MTND1P4-201ENST00000435196 415 ntBASIC3.77□□□□□ -1.81
VPS52Q8N1B4 ARPC3P1-201ENST00000437218 533 ntBASIC3.77□□□□□ -1.81
VPS52Q8N1B4 AL590999.1-206ENST00000437947 436 ntTSL 3 BASIC3.77□□□□□ -1.81
VPS52Q8N1B4 AC093156.1-201ENST00000440382 670 ntBASIC3.77□□□□□ -1.81
VPS52Q8N1B4 AL136380.1-201ENST00000447970 162 ntBASIC3.77□□□□□ -1.81
VPS52Q8N1B4 HMGB3P8-201ENST00000449709 577 ntBASIC3.77□□□□□ -1.81
VPS52Q8N1B4 RPS24P6-201ENST00000452670 400 ntBASIC3.77□□□□□ -1.81
VPS52Q8N1B4 PCCA-AS1-203ENST00000455958 356 ntTSL 3 BASIC3.77□□□□□ -1.81
VPS52Q8N1B4 AC108059.3-201ENST00000456388 214 ntBASIC3.77□□□□□ -1.81
VPS52Q8N1B4 ATP6V1G3-204ENST00000489986 449 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
VPS52Q8N1B4 RPL9P6-201ENST00000492764 598 ntBASIC3.77□□□□□ -1.81
VPS52Q8N1B4 AC135721.1-201ENST00000497954 479 ntBASIC3.77□□□□□ -1.81
VPS52Q8N1B4 LEF1-218ENST00000512172 598 ntTSL 2 BASIC3.77□□□□□ -1.81
VPS52Q8N1B4 Vault.3-201ENST00000516676 95 ntBASIC3.77□□□□□ -1.81
VPS52Q8N1B4 AC084116.3-201ENST00000519123 429 ntTSL 3 BASIC3.77□□□□□ -1.81
VPS52Q8N1B4 AC009623.2-201ENST00000522524 465 ntTSL 3 BASIC3.77□□□□□ -1.81
VPS52Q8N1B4 AP002768.1-201ENST00000526741 320 ntTSL 3 BASIC3.77□□□□□ -1.81
VPS52Q8N1B4 AL845331.3-202ENST00000562856 261 ntBASIC3.77□□□□□ -1.81
VPS52Q8N1B4 AC126407.1-201ENST00000563044 566 ntTSL 4 BASIC3.77□□□□□ -1.81
VPS52Q8N1B4 AC025272.1-201ENST00000569661 483 ntTSL 2 BASIC3.77□□□□□ -1.81
VPS52Q8N1B4 AC012182.1-201ENST00000570133 895 ntBASIC3.77□□□□□ -1.81
VPS52Q8N1B4 MIR4738-201ENST00000579134 87 ntBASIC3.77□□□□□ -1.81
VPS52Q8N1B4 MIR4425-201ENST00000580572 84 ntBASIC3.77□□□□□ -1.81
VPS52Q8N1B4 AP001972.3-202ENST00000603012 375 ntTSL 3 BASIC3.77□□□□□ -1.81
VPS52Q8N1B4 RASSF8-215ENST00000611440 852 ntTSL 5 BASIC3.77□□□□□ -1.81
VPS52Q8N1B4 5S_rRNA.12-201ENST00000617631 107 ntBASIC3.77□□□□□ -1.81
VPS52Q8N1B4 AC104971.4-201ENST00000622763 249 ntTSL 5 BASIC3.77□□□□□ -1.81
VPS52Q8N1B4 AL732372.2-225ENST00000642124 456 ntBASIC3.77□□□□□ -1.81
VPS52Q8N1B4 DCUN1D1-201ENST00000292782 7954 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
VPS52Q8N1B4 SLC39A10-202ENST00000409086 5432 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
VPS52Q8N1B4 RAD17-206ENST00000358030 2648 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
VPS52Q8N1B4 SYNE1-212ENST00000423061 27436 ntAPPRIS ALT2 TSL 1 (best) BASIC3.77□□□□□ -1.81
VPS52Q8N1B4 EPS15-202ENST00000371730 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC3.77□□□□□ -1.81
VPS52Q8N1B4 MUC7-203ENST00000456088 2479 ntAPPRIS P2 TSL 4 BASIC3.77□□□□□ -1.81
VPS52Q8N1B4 IBTK-209ENST00000510291 4109 ntTSL 1 (best) BASIC3.76□□□□□ -1.81
VPS52Q8N1B4 AL079305.1-201ENST00000623159 3008 ntBASIC3.76□□□□□ -1.81
VPS52Q8N1B4 FNDC3A-202ENST00000398316 5714 ntTSL 1 (best) BASIC3.76□□□□□ -1.81
VPS52Q8N1B4 RIOK3P1-201ENST00000418778 1528 ntBASIC3.76□□□□□ -1.81
VPS52Q8N1B4 MTRNR2L10-201ENST00000545075 1530 ntAPPRIS P1 BASIC3.76□□□□□ -1.81
VPS52Q8N1B4 ATP2B1-203ENST00000393164 3127 ntTSL 1 (best) BASIC3.76□□□□□ -1.81
VPS52Q8N1B4 ADGRG4-203ENST00000394143 9931 ntAPPRIS P2 TSL 1 (best) BASIC3.76□□□□□ -1.81
VPS52Q8N1B4 ZNF483-201ENST00000309235 3655 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
VPS52Q8N1B4 KNTC1-205ENST00000450485 3655 ntTSL 2 BASIC3.76□□□□□ -1.81
VPS52Q8N1B4 LBR-202ENST00000338179 3812 ntAPPRIS P1 TSL 5 BASIC3.76□□□□□ -1.81
VPS52Q8N1B4 RNU6-1103P-201ENST00000384150 107 ntBASIC3.76□□□□□ -1.81
VPS52Q8N1B4 U3.19-201ENST00000390893 196 ntBASIC3.76□□□□□ -1.81
VPS52Q8N1B4 RNU6-882P-201ENST00000391025 103 ntBASIC3.76□□□□□ -1.81
VPS52Q8N1B4 RNU2-43P-201ENST00000410306 190 ntBASIC3.76□□□□□ -1.81
VPS52Q8N1B4 MTCO3P12-201ENST00000416718 547 ntBASIC3.76□□□□□ -1.81
VPS52Q8N1B4 C21orf91-OT1-202ENST00000430815 717 ntTSL 5 BASIC3.76□□□□□ -1.81
VPS52Q8N1B4 OR2B8P-201ENST00000432841 938 ntBASIC3.76□□□□□ -1.81
VPS52Q8N1B4 AC025428.1-201ENST00000444137 403 ntTSL 3 BASIC3.76□□□□□ -1.81
VPS52Q8N1B4 LINC01758-201ENST00000448001 458 ntTSL 3 BASIC3.76□□□□□ -1.81
VPS52Q8N1B4 AC234775.1-201ENST00000454247 670 ntBASIC3.76□□□□□ -1.81
VPS52Q8N1B4 AC011998.3-201ENST00000457053 254 ntTSL 3 BASIC3.76□□□□□ -1.81
VPS52Q8N1B4 RPL23AP14-201ENST00000468281 468 ntBASIC3.76□□□□□ -1.81
VPS52Q8N1B4 MIR1302-2HG-201ENST00000469289 535 ntTSL 5 BASIC3.76□□□□□ -1.81
VPS52Q8N1B4 RPS3AP17-201ENST00000472594 777 ntBASIC3.76□□□□□ -1.81
VPS52Q8N1B4 AC004924.1-201ENST00000480160 781 ntBASIC3.76□□□□□ -1.81
VPS52Q8N1B4 RPS3AP50-201ENST00000487064 803 ntBASIC3.76□□□□□ -1.81
VPS52Q8N1B4 HMGB1P29-201ENST00000505659 499 ntBASIC3.76□□□□□ -1.81
VPS52Q8N1B4 SLC7A11-AS1-201ENST00000510066 817 ntTSL 2 BASIC3.76□□□□□ -1.81
VPS52Q8N1B4 AC010265.1-201ENST00000513509 211 ntBASIC3.76□□□□□ -1.81
VPS52Q8N1B4 RNA5SP337-201ENST00000517007 109 ntBASIC3.76□□□□□ -1.81
VPS52Q8N1B4 SNORA31.20-201ENST00000517111 133 ntBASIC3.76□□□□□ -1.81
VPS52Q8N1B4 AP003072.2-201ENST00000527756 676 ntBASIC3.76□□□□□ -1.81
VPS52Q8N1B4 DEFB108D-201ENST00000527787 222 ntBASIC3.76□□□□□ -1.81
VPS52Q8N1B4 MTCYBP41-201ENST00000528913 1123 ntBASIC3.76□□□□□ -1.81
VPS52Q8N1B4 DEFB108A-201ENST00000530110 222 ntBASIC3.76□□□□□ -1.81
VPS52Q8N1B4 DIAPH2-AS1-203ENST00000542084 450 ntTSL 5 BASIC3.76□□□□□ -1.81
VPS52Q8N1B4 AC009320.1-201ENST00000549070 349 ntTSL 3 BASIC3.76□□□□□ -1.81
VPS52Q8N1B4 TIMM9-207ENST00000555930 448 ntTSL 3 BASIC3.76□□□□□ -1.81
VPS52Q8N1B4 MIR4474-201ENST00000579189 78 ntBASIC3.76□□□□□ -1.81
VPS52Q8N1B4 MIR3167-201ENST00000579623 85 ntBASIC3.76□□□□□ -1.81
VPS52Q8N1B4 AC069061.2-202ENST00000580280 357 ntTSL 3 BASIC3.76□□□□□ -1.81
VPS52Q8N1B4 YPEL5P2-201ENST00000605553 359 ntBASIC3.76□□□□□ -1.81
VPS52Q8N1B4 RMST_8.1-201ENST00000610287 165 ntBASIC3.76□□□□□ -1.81
VPS52Q8N1B4 AC073534.2-201ENST00000620377 381 ntBASIC3.76□□□□□ -1.81
VPS52Q8N1B4 THOC1-220ENST00000621904 1083 ntTSL 5 BASIC3.76□□□□□ -1.81
VPS52Q8N1B4 AC068880.5-201ENST00000624331 290 ntBASIC3.76□□□□□ -1.81
VPS52Q8N1B4 AC068137.3-201ENST00000639191 341 ntBASIC3.76□□□□□ -1.81
VPS52Q8N1B4 AC073869.6-201ENST00000640656 341 ntBASIC3.76□□□□□ -1.81
VPS52Q8N1B4 SUGT1-201ENST00000310528 14131 ntAPPRIS P3 TSL 1 (best) BASIC3.76□□□□□ -1.81
VPS52Q8N1B4 CASC1-203ENST00000395987 2363 ntAPPRIS P3 TSL 1 (best) BASIC3.76□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 87.2 ms