Protein–RNA interactions for Protein: Q8IWP9

CCDC28A, Coiled-coil domain-containing protein 28A, humanhuman

Predictions only

Length 274 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC28AQ8IWP9 APPL2-203ENST00000546731 684 ntTSL 2 BASIC3.57□□□□□ -1.84
CCDC28AQ8IWP9 EDDM3DP-201ENST00000554692 434 ntBASIC3.57□□□□□ -1.84
CCDC28AQ8IWP9 LRRC49-224ENST00000560691 2531 ntTSL 2 BASIC3.57□□□□□ -1.84
CCDC28AQ8IWP9 AC007493.1-202ENST00000567899 517 ntTSL 2 BASIC3.57□□□□□ -1.84
CCDC28AQ8IWP9 RPL23AP97-201ENST00000568955 471 ntBASIC3.57□□□□□ -1.84
CCDC28AQ8IWP9 RN7SL652P-201ENST00000577769 300 ntBASIC3.57□□□□□ -1.84
CCDC28AQ8IWP9 AC011933.3-201ENST00000578226 372 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
CCDC28AQ8IWP9 MIR5699-201ENST00000578903 90 ntBASIC3.57□□□□□ -1.84
CCDC28AQ8IWP9 AC015908.4-201ENST00000582334 575 ntTSL 4 BASIC3.57□□□□□ -1.84
CCDC28AQ8IWP9 AP005264.4-201ENST00000592203 422 ntTSL 5 BASIC3.57□□□□□ -1.84
CCDC28AQ8IWP9 AL035413.2-201ENST00000604801 525 ntBASIC3.57□□□□□ -1.84
CCDC28AQ8IWP9 AC009570.1-201ENST00000609599 745 ntBASIC3.57□□□□□ -1.84
CCDC28AQ8IWP9 AC007497.1-201ENST00000610421 561 ntBASIC3.57□□□□□ -1.84
CCDC28AQ8IWP9 AL627230.1-201ENST00000613077 211 ntBASIC3.57□□□□□ -1.84
CCDC28AQ8IWP9 MIR6729-201ENST00000618194 65 ntBASIC3.57□□□□□ -1.84
CCDC28AQ8IWP9 AC019278.1-201ENST00000623516 479 ntBASIC3.57□□□□□ -1.84
CCDC28AQ8IWP9 AP002799.1-201ENST00000623552 423 ntBASIC3.57□□□□□ -1.84
CCDC28AQ8IWP9 AP003122.6-201ENST00000623831 495 ntBASIC3.57□□□□□ -1.84
CCDC28AQ8IWP9 AC009033.1-201ENST00000624279 431 ntBASIC3.57□□□□□ -1.84
CCDC28AQ8IWP9 KIAA1524-208ENST00000625495 147 ntTSL 5 BASIC3.57□□□□□ -1.84
CCDC28AQ8IWP9 CNOT1-223ENST00000628857 291 ntTSL 5 BASIC3.57□□□□□ -1.84
CCDC28AQ8IWP9 AC022336.2-201ENST00000568966 2538 ntBASIC3.56□□□□□ -1.84
CCDC28AQ8IWP9 AL359693.1-201ENST00000614959 2407 ntBASIC3.56□□□□□ -1.84
CCDC28AQ8IWP9 KERA-201ENST00000266719 2162 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
CCDC28AQ8IWP9 AL442639.1-201ENST00000625030 1899 ntBASIC3.56□□□□□ -1.84
CCDC28AQ8IWP9 AC006504.1-201ENST00000562493 3666 ntBASIC3.56□□□□□ -1.84
CCDC28AQ8IWP9 KCNJ16-203ENST00000392671 3981 ntAPPRIS P1 TSL 2 BASIC3.56□□□□□ -1.84
CCDC28AQ8IWP9 RNA5SP507-201ENST00000363603 121 ntBASIC3.56□□□□□ -1.84
CCDC28AQ8IWP9 SNORA74A-201ENST00000364089 198 ntBASIC3.56□□□□□ -1.84
CCDC28AQ8IWP9 RNU4-20P-201ENST00000365601 151 ntBASIC3.56□□□□□ -1.84
CCDC28AQ8IWP9 S100A12-201ENST00000368737 518 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
CCDC28AQ8IWP9 RNU6-38P-201ENST00000384085 107 ntBASIC3.56□□□□□ -1.84
CCDC28AQ8IWP9 RNU6-876P-201ENST00000391295 104 ntBASIC3.56□□□□□ -1.84
CCDC28AQ8IWP9 AL139039.1-201ENST00000401900 692 ntBASIC3.56□□□□□ -1.84
CCDC28AQ8IWP9 MTHFD2P2-201ENST00000407725 247 ntBASIC3.56□□□□□ -1.84
CCDC28AQ8IWP9 RN7SKP229-201ENST00000410465 302 ntBASIC3.56□□□□□ -1.84
CCDC28AQ8IWP9 AL109924.3-201ENST00000413324 393 ntTSL 2 BASIC3.56□□□□□ -1.84
CCDC28AQ8IWP9 RPL31P12-201ENST00000422587 358 ntBASIC3.56□□□□□ -1.84
CCDC28AQ8IWP9 AC092047.1-201ENST00000424997 240 ntBASIC3.56□□□□□ -1.84
CCDC28AQ8IWP9 SRIP2-201ENST00000428470 166 ntBASIC3.56□□□□□ -1.84
CCDC28AQ8IWP9 AC079799.1-201ENST00000430696 331 ntTSL 3 BASIC3.56□□□□□ -1.84
CCDC28AQ8IWP9 VN1R34P-201ENST00000447387 883 ntBASIC3.56□□□□□ -1.84
CCDC28AQ8IWP9 RNA5SP310-201ENST00000459084 116 ntBASIC3.56□□□□□ -1.84
CCDC28AQ8IWP9 RNU6-333P-201ENST00000459117 107 ntBASIC3.56□□□□□ -1.84
CCDC28AQ8IWP9 AC121764.1-201ENST00000472238 563 ntTSL 4 BASIC3.56□□□□□ -1.84
CCDC28AQ8IWP9 AC012181.1-201ENST00000479895 423 ntBASIC3.56□□□□□ -1.84
CCDC28AQ8IWP9 RPSAP50-201ENST00000481955 852 ntBASIC3.56□□□□□ -1.84
CCDC28AQ8IWP9 LRRC34P2-201ENST00000514850 553 ntBASIC3.56□□□□□ -1.84
CCDC28AQ8IWP9 RNU6-1315P-201ENST00000517187 99 ntBASIC3.56□□□□□ -1.84
CCDC28AQ8IWP9 UTP23-205ENST00000520733 369 ntTSL 3 BASIC3.56□□□□□ -1.84
CCDC28AQ8IWP9 SAMD15-202ENST00000533095 412 ntTSL 5 BASIC3.56□□□□□ -1.84
CCDC28AQ8IWP9 BNIP3P6-201ENST00000549284 499 ntBASIC3.56□□□□□ -1.84
CCDC28AQ8IWP9 AC025263.2-201ENST00000550437 548 ntAPPRIS P1 TSL 5 BASIC3.56□□□□□ -1.84
CCDC28AQ8IWP9 MEG8-215ENST00000555354 469 ntTSL 3 BASIC3.56□□□□□ -1.84
CCDC28AQ8IWP9 AC012186.2-201ENST00000569353 321 ntTSL 3 BASIC3.56□□□□□ -1.84
CCDC28AQ8IWP9 MIR3691-201ENST00000578066 90 ntBASIC3.56□□□□□ -1.84
CCDC28AQ8IWP9 AC079610.3-201ENST00000606960 147 ntTSL 3 BASIC3.56□□□□□ -1.84
CCDC28AQ8IWP9 U6.42-201ENST00000618440 107 ntBASIC3.56□□□□□ -1.84
CCDC28AQ8IWP9 AC006504.8-201ENST00000621046 635 ntBASIC3.56□□□□□ -1.84
CCDC28AQ8IWP9 AC027309.3-201ENST00000623419 351 ntBASIC3.56□□□□□ -1.84
CCDC28AQ8IWP9 AC091905.4-201ENST00000623432 202 ntBASIC3.56□□□□□ -1.84
CCDC28AQ8IWP9 ARL15-202ENST00000504924 2486 ntAPPRIS P2 TSL 1 (best) BASIC3.56□□□□□ -1.84
CCDC28AQ8IWP9 ARL15-207ENST00000620747 2486 ntAPPRIS ALT1 TSL 5 BASIC3.56□□□□□ -1.84
CCDC28AQ8IWP9 MUC7-201ENST00000304887 2443 ntAPPRIS P2 TSL 1 (best) BASIC3.56□□□□□ -1.84
CCDC28AQ8IWP9 RTKN2-201ENST00000315289 2383 ntTSL 2 BASIC3.56□□□□□ -1.84
CCDC28AQ8IWP9 C2orf78-201ENST00000409561 3045 ntAPPRIS P1 TSL 2 BASIC3.56□□□□□ -1.84
CCDC28AQ8IWP9 IQCG-205ENST00000455191 1981 ntAPPRIS P1 TSL 2 BASIC3.56□□□□□ -1.84
CCDC28AQ8IWP9 SYNE1-212ENST00000423061 27436 ntAPPRIS ALT2 TSL 1 (best) BASIC3.56□□□□□ -1.84
CCDC28AQ8IWP9 ARHGAP42-201ENST00000298815 4752 ntAPPRIS P1 TSL 5 BASIC3.56□□□□□ -1.84
CCDC28AQ8IWP9 NKTR-219ENST00000617821 7319 ntTSL 5 BASIC3.56□□□□□ -1.84
CCDC28AQ8IWP9 TLK1-212ENST00000521943 2605 ntTSL 2 BASIC3.56□□□□□ -1.84
CCDC28AQ8IWP9 FAM35A-201ENST00000298784 3402 ntAPPRIS P1 TSL 2 BASIC3.56□□□□□ -1.84
CCDC28AQ8IWP9 GLCE-202ENST00000559420 4840 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
CCDC28AQ8IWP9 RAD17-202ENST00000305138 3164 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
CCDC28AQ8IWP9 AF117829.1-206ENST00000621883 3802 ntBASIC3.55□□□□□ -1.84
CCDC28AQ8IWP9 CRISP3-204ENST00000433368 2205 ntAPPRIS ALT2 TSL 5 BASIC3.55□□□□□ -1.84
CCDC28AQ8IWP9 CBLL1-201ENST00000222597 2003 ntAPPRIS ALT1 TSL 1 (best) BASIC3.55□□□□□ -1.84
CCDC28AQ8IWP9 DAZ4-201ENST00000382296 2048 ntAPPRIS P5 TSL 5 BASIC3.55□□□□□ -1.84
CCDC28AQ8IWP9 FAM35BP-202ENST00000497389 3337 ntBASIC3.55□□□□□ -1.84
CCDC28AQ8IWP9 AC109780.1-201ENST00000451768 1344 ntBASIC3.55□□□□□ -1.84
CCDC28AQ8IWP9 ZNF439-201ENST00000304030 2622 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
CCDC28AQ8IWP9 HSPA8P4-201ENST00000511877 1920 ntBASIC3.55□□□□□ -1.84
CCDC28AQ8IWP9 SYF2-202ENST00000354361 926 ntTSL 2 BASIC3.55□□□□□ -1.84
CCDC28AQ8IWP9 MT-TL1-201ENST00000386347 75 ntBASIC3.55□□□□□ -1.84
CCDC28AQ8IWP9 MIR765-201ENST00000390226 114 ntBASIC3.55□□□□□ -1.84
CCDC28AQ8IWP9 RNA5SP332-201ENST00000391063 115 ntBASIC3.55□□□□□ -1.84
CCDC28AQ8IWP9 AP000567.1-201ENST00000406413 156 ntBASIC3.55□□□□□ -1.84
CCDC28AQ8IWP9 SNORA74C-2-201ENST00000411179 201 ntBASIC3.55□□□□□ -1.84
CCDC28AQ8IWP9 EEF1A1P40-201ENST00000412883 573 ntBASIC3.55□□□□□ -1.84
CCDC28AQ8IWP9 AC007390.1-201ENST00000415722 356 ntBASIC3.55□□□□□ -1.84
CCDC28AQ8IWP9 AC005062.1-207ENST00000418442 587 ntTSL 3 BASIC3.55□□□□□ -1.84
CCDC28AQ8IWP9 ARL5AP1-201ENST00000418991 388 ntBASIC3.55□□□□□ -1.84
CCDC28AQ8IWP9 AL355314.2-201ENST00000427182 436 ntTSL 3 BASIC3.55□□□□□ -1.84
CCDC28AQ8IWP9 RPL23AP69-201ENST00000431134 458 ntBASIC3.55□□□□□ -1.84
CCDC28AQ8IWP9 ERLEC1P1-201ENST00000433806 578 ntBASIC3.55□□□□□ -1.84
CCDC28AQ8IWP9 AC008264.1-201ENST00000447612 367 ntBASIC3.55□□□□□ -1.84
CCDC28AQ8IWP9 MTND3P10-201ENST00000450967 341 ntBASIC3.55□□□□□ -1.84
CCDC28AQ8IWP9 SCARNA18-201ENST00000459004 134 ntBASIC3.55□□□□□ -1.84
CCDC28AQ8IWP9 snoU13.20-201ENST00000459180 104 ntBASIC3.55□□□□□ -1.84
CCDC28AQ8IWP9 RPL21P99-201ENST00000480369 423 ntBASIC3.55□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 98.8 ms